Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20284
         (727 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT029645-1|ABL75704.1|  269|Drosophila melanogaster IP17216p pro...    45   1e-04
AE014296-329|AAF47545.1|  277|Drosophila melanogaster CG7977-PA ...    45   1e-04
DQ450529-1|ABE27283.1|  277|Drosophila melanogaster L23A ribosom...    44   2e-04
AF080130-1|AAD19340.1|  269|Drosophila melanogaster ribosomal pr...    38   0.011
BT025057-1|ABE73228.1|  481|Drosophila melanogaster IP15830p pro...    32   0.91 
BT004882-1|AAO45238.1|  481|Drosophila melanogaster GH13361p pro...    32   0.91 
AE014298-2818|AAF48935.1|  481|Drosophila melanogaster CG7874-PA...    32   0.91 

>BT029645-1|ABL75704.1|  269|Drosophila melanogaster IP17216p
           protein.
          Length = 269

 Score = 44.8 bits (101), Expect = 1e-04
 Identities = 18/30 (60%), Positives = 23/30 (76%)
 Frame = +2

Query: 638 QRKVVKGEHGKRVRKIRNSVHFRRPKTFEL 727
           Q+K++KG  G R RKIR +VHFRRP T +L
Sbjct: 138 QKKIIKGAFGTRARKIRTNVHFRRPTTLKL 167


>AE014296-329|AAF47545.1|  277|Drosophila melanogaster CG7977-PA
           protein.
          Length = 277

 Score = 44.8 bits (101), Expect = 1e-04
 Identities = 18/30 (60%), Positives = 23/30 (76%)
 Frame = +2

Query: 638 QRKVVKGEHGKRVRKIRNSVHFRRPKTFEL 727
           Q+K++KG  G R RKIR +VHFRRP T +L
Sbjct: 146 QKKIIKGAFGTRARKIRTNVHFRRPTTLKL 175


>DQ450529-1|ABE27283.1|  277|Drosophila melanogaster L23A ribosomal
           protein naturalvariant protein.
          Length = 277

 Score = 44.0 bits (99), Expect = 2e-04
 Identities = 18/30 (60%), Positives = 23/30 (76%)
 Frame = +2

Query: 638 QRKVVKGEHGKRVRKIRNSVHFRRPKTFEL 727
           Q+K++KG  G R RKIR +VHFRRP T +L
Sbjct: 146 QKKIIKGAFGTRARKIRANVHFRRPTTLKL 175


>AF080130-1|AAD19340.1|  269|Drosophila melanogaster ribosomal
           protein L23a protein.
          Length = 269

 Score = 38.3 bits (85), Expect = 0.011
 Identities = 17/30 (56%), Positives = 22/30 (73%)
 Frame = +2

Query: 638 QRKVVKGEHGKRVRKIRNSVHFRRPKTFEL 727
           Q+K++K   G R RKIR +VHFRRP T +L
Sbjct: 139 QKKIIKA-FGTRARKIRTNVHFRRPTTLKL 167


>BT025057-1|ABE73228.1|  481|Drosophila melanogaster IP15830p
           protein.
          Length = 481

 Score = 31.9 bits (69), Expect = 0.91
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +1

Query: 148 QNTGTCPESSCACPEISCACPETSCACPESSCLCPQ 255
           + T + PE S + PE S + PE + + PE S   P+
Sbjct: 159 EETTSAPEESSSAPEESSSAPEETTSAPEESSSAPE 194



 Score = 31.1 bits (67), Expect = 1.6
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +1

Query: 148 QNTGTCPESSCACPEISCACPETSCACPESSCLCPQ 255
           + + + PE S + PE + + PE S + PE S   P+
Sbjct: 166 EESSSAPEESSSAPEETTSAPEESSSAPEESSSAPE 201



 Score = 31.1 bits (67), Expect = 1.6
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +1

Query: 148 QNTGTCPESSCACPEISCACPETSCACPESSCLCP 252
           + T + PE S + PE S + PE + + PE S   P
Sbjct: 180 EETTSAPEESSSAPEESSSAPEETTSAPEESSSAP 214



 Score = 30.7 bits (66), Expect = 2.1
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +1

Query: 148 QNTGTCPESSCACPEISCACPETSCACPESSCLCPQ 255
           + T + PE + + PE + + PE S + PE S   P+
Sbjct: 145 EETTSAPEETTSAPEETTSAPEESSSAPEESSSAPE 180



 Score = 30.7 bits (66), Expect = 2.1
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +1

Query: 148 QNTGTCPESSCACPEISCACPETSCACPESSCLCPQ 255
           + T + PE + + PE S + PE S + PE +   P+
Sbjct: 152 EETTSAPEETTSAPEESSSAPEESSSAPEETTSAPE 187



 Score = 29.9 bits (64), Expect = 3.7
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = +1

Query: 148 QNTGTCPESSCACPEISCACPETSCACPESSCLCPQ 255
           Q + + PE + + PE + + PE + + PE S   P+
Sbjct: 138 QESSSAPEETTSAPEETTSAPEETTSAPEESSSAPE 173



 Score = 29.9 bits (64), Expect = 3.7
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = +1

Query: 148 QNTGTCPESSCACPEISCACPETSCACPESSCLCPQ 255
           + + + PE + + PE S + PE S + PE +   P+
Sbjct: 173 EESSSAPEETTSAPEESSSAPEESSSAPEETTSAPE 208


>BT004882-1|AAO45238.1|  481|Drosophila melanogaster GH13361p
           protein.
          Length = 481

 Score = 31.9 bits (69), Expect = 0.91
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +1

Query: 148 QNTGTCPESSCACPEISCACPETSCACPESSCLCPQ 255
           + T + PE S + PE S + PE + + PE S   P+
Sbjct: 159 EETTSAPEESSSAPEESSSAPEETTSAPEESSSAPE 194



 Score = 31.1 bits (67), Expect = 1.6
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +1

Query: 148 QNTGTCPESSCACPEISCACPETSCACPESSCLCPQ 255
           + + + PE S + PE + + PE S + PE S   P+
Sbjct: 166 EESSSAPEESSSAPEETTSAPEESSSAPEESSSAPE 201



 Score = 31.1 bits (67), Expect = 1.6
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +1

Query: 148 QNTGTCPESSCACPEISCACPETSCACPESSCLCP 252
           + T + PE S + PE S + PE + + PE S   P
Sbjct: 180 EETTSAPEESSSAPEESSSAPEETTSAPEESSSAP 214



 Score = 30.7 bits (66), Expect = 2.1
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +1

Query: 148 QNTGTCPESSCACPEISCACPETSCACPESSCLCPQ 255
           + T + PE + + PE + + PE S + PE S   P+
Sbjct: 145 EETTSAPEETTSAPEETTSAPEESSSAPEESSSAPE 180



 Score = 30.7 bits (66), Expect = 2.1
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +1

Query: 148 QNTGTCPESSCACPEISCACPETSCACPESSCLCPQ 255
           + T + PE + + PE S + PE S + PE +   P+
Sbjct: 152 EETTSAPEETTSAPEESSSAPEESSSAPEETTSAPE 187



 Score = 29.9 bits (64), Expect = 3.7
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = +1

Query: 148 QNTGTCPESSCACPEISCACPETSCACPESSCLCPQ 255
           Q + + PE + + PE + + PE + + PE S   P+
Sbjct: 138 QESSSAPEETTSAPEETTSAPEETTSAPEESSSAPE 173



 Score = 29.9 bits (64), Expect = 3.7
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = +1

Query: 148 QNTGTCPESSCACPEISCACPETSCACPESSCLCPQ 255
           + + + PE + + PE S + PE S + PE +   P+
Sbjct: 173 EESSSAPEETTSAPEESSSAPEESSSAPEETTSAPE 208


>AE014298-2818|AAF48935.1|  481|Drosophila melanogaster CG7874-PA
           protein.
          Length = 481

 Score = 31.9 bits (69), Expect = 0.91
 Identities = 13/36 (36%), Positives = 20/36 (55%)
 Frame = +1

Query: 148 QNTGTCPESSCACPEISCACPETSCACPESSCLCPQ 255
           + T + PE S + PE S + PE + + PE S   P+
Sbjct: 159 EETTSAPEESSSAPEESSSAPEETTSAPEESSSAPE 194



 Score = 31.1 bits (67), Expect = 1.6
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +1

Query: 148 QNTGTCPESSCACPEISCACPETSCACPESSCLCPQ 255
           + + + PE S + PE + + PE S + PE S   P+
Sbjct: 166 EESSSAPEESSSAPEETTSAPEESSSAPEESSSAPE 201



 Score = 31.1 bits (67), Expect = 1.6
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +1

Query: 148 QNTGTCPESSCACPEISCACPETSCACPESSCLCP 252
           + T + PE S + PE S + PE + + PE S   P
Sbjct: 180 EETTSAPEESSSAPEESSSAPEETTSAPEESSSAP 214



 Score = 30.7 bits (66), Expect = 2.1
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +1

Query: 148 QNTGTCPESSCACPEISCACPETSCACPESSCLCPQ 255
           + T + PE + + PE + + PE S + PE S   P+
Sbjct: 145 EETTSAPEETTSAPEETTSAPEESSSAPEESSSAPE 180



 Score = 30.7 bits (66), Expect = 2.1
 Identities = 12/36 (33%), Positives = 20/36 (55%)
 Frame = +1

Query: 148 QNTGTCPESSCACPEISCACPETSCACPESSCLCPQ 255
           + T + PE + + PE S + PE S + PE +   P+
Sbjct: 152 EETTSAPEETTSAPEESSSAPEESSSAPEETTSAPE 187



 Score = 29.9 bits (64), Expect = 3.7
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = +1

Query: 148 QNTGTCPESSCACPEISCACPETSCACPESSCLCPQ 255
           Q + + PE + + PE + + PE + + PE S   P+
Sbjct: 138 QESSSAPEETTSAPEETTSAPEETTSAPEESSSAPE 173



 Score = 29.9 bits (64), Expect = 3.7
 Identities = 11/36 (30%), Positives = 20/36 (55%)
 Frame = +1

Query: 148 QNTGTCPESSCACPEISCACPETSCACPESSCLCPQ 255
           + + + PE + + PE S + PE S + PE +   P+
Sbjct: 173 EESSSAPEETTSAPEESSSAPEESSSAPEETTSAPE 208


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,283,834
Number of Sequences: 53049
Number of extensions: 215659
Number of successful extensions: 1053
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 816
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1014
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3252477558
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)