Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20280
(778 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_36681| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.064
SB_10988| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.084
SB_15878| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.15
SB_44668| Best HMM Match : 7tm_1 (HMM E-Value=6.1e-05) 32 0.60
SB_12331| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.60
SB_50497| Best HMM Match : CH (HMM E-Value=0.0084) 31 0.79
SB_15028| Best HMM Match : Drf_FH1 (HMM E-Value=0.84) 31 0.79
SB_7420| Best HMM Match : Extensin_2 (HMM E-Value=0.061) 31 0.79
SB_32577| Best HMM Match : PH (HMM E-Value=7e-17) 31 0.79
SB_12442| Best HMM Match : zf-MYND (HMM E-Value=0.0028) 31 1.0
SB_41882| Best HMM Match : Amelogenin (HMM E-Value=2) 31 1.4
SB_30283| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.4
SB_48933| Best HMM Match : Drf_FH1 (HMM E-Value=1.4) 30 1.8
SB_47959| Best HMM Match : rve (HMM E-Value=3e-29) 30 1.8
SB_16977| Best HMM Match : Involucrin (HMM E-Value=0.012) 30 1.8
SB_3768| Best HMM Match : Involucrin (HMM E-Value=0.021) 30 1.8
SB_40415| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.4
SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30) 29 4.2
SB_53857| Best HMM Match : DUF948 (HMM E-Value=5.2) 29 4.2
SB_24046| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_7332| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_57304| Best HMM Match : SRP9 (HMM E-Value=0.7) 29 4.2
SB_47598| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_37985| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.2
SB_24482| Best HMM Match : KID (HMM E-Value=0.045) 29 4.2
SB_56224| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_39528| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_34419| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_31498| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_25312| Best HMM Match : Vicilin_N (HMM E-Value=0.61) 29 5.5
SB_52484| Best HMM Match : AbfB (HMM E-Value=0.011) 29 5.5
SB_24023| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_9150| Best HMM Match : PspA_IM30 (HMM E-Value=0.98) 29 5.5
SB_5589| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.5
SB_2799| Best HMM Match : rve (HMM E-Value=7.8e-26) 28 7.3
SB_39858| Best HMM Match : Spectrin (HMM E-Value=2.6e-05) 28 9.7
SB_19534| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.7
>SB_36681| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1081
Score = 35.1 bits (77), Expect = 0.064
Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 1/87 (1%)
Frame = +1
Query: 502 PYEVVEPMESTEPENSLMSVS-AEPLKMKDSLASISPEPLEVKDPLATVIPEQLEEKESV 678
P VEP + EP N++ S AEP + ++ EP +P TV P E S
Sbjct: 73 PTSTVEPTSTVEPTNTVEPTSTAEPTNTVEPTNTV--EPTSTVEPTNTVEPTSTVEPTS- 129
Query: 679 TTEPLEVKDSQASVTAEPLEVKDPLAS 759
T EP + + T EP +P ++
Sbjct: 130 TVEPTNTVEPTS--TVEPTSTVEPTST 154
>SB_10988| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 366
Score = 34.7 bits (76), Expect = 0.084
Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Frame = +1
Query: 505 YEVVEPMESTEPE-NSLMSVSAEPLKMKDSLASISPEPLEVKDPLATVIPEQLEEKESVT 681
Y +E +T+ NS++ VS L++ S +S LEV +P V LE V
Sbjct: 59 YSTLEVSNTTQGVCNSMLEVSNSALEVSSSTLEVSNSTLEVCNPTLEVSNSTLE----VC 114
Query: 682 TEPLEVKDSQASVTAEPLEVKD 747
LEV +S V++ LEV +
Sbjct: 115 NPTLEVSNSTLEVSSSTLEVSN 136
>SB_15878| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1929
Score = 33.9 bits (74), Expect = 0.15
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = +2
Query: 296 TKDSRSN--SPLPAEVPLPRESPIPAESHIPVDDLITSIETPLESTIQEVASVDDQPEVE 469
T +SRS+ S LPAE LP ES +P ESH P + + E I + ++ P+V
Sbjct: 1677 TTESRSSAESRLPAESRLPAESRLPYESHSPYESRYPT-EPSSAYPITVIKTLPAPPKVS 1735
Query: 470 REKSDVP 490
+ + P
Sbjct: 1736 AKPATAP 1742
>SB_44668| Best HMM Match : 7tm_1 (HMM E-Value=6.1e-05)
Length = 1604
Score = 31.9 bits (69), Expect = 0.60
Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 12/76 (15%)
Frame = +2
Query: 305 SRSNSPLPAEVPLPRESPIPAESHIPVDD---LITSIET--PLESTIQEVASVDDQ---- 457
+R +PLP E P+P + +P +H+P++ +TS+ T PLE + +V +
Sbjct: 616 TRLPTPLPLERPVPAVTRLP--THLPLEQPVPAVTSLPTHLPLERPLPDVTRLPTHLPLE 673
Query: 458 ---PEVEREKSDVPLE 496
P V R +D+PLE
Sbjct: 674 RPVPAVTRLPTDLPLE 689
Score = 29.9 bits (64), Expect = 2.4
Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 4/27 (14%)
Frame = +2
Query: 320 PLPA----EVPLPRESPIPAESHIPVD 388
P+PA PLP E P+PA +H+P D
Sbjct: 483 PVPAVTRLPTPLPLERPVPAVTHLPTD 509
Score = 28.3 bits (60), Expect = 7.3
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Frame = +2
Query: 305 SRSNSPLPAEVPLPRESPIPAESHIPVD---DLITSIET--PLESTIQEVASVDDQPEVE 469
+R +PLP E P+P + +P +H+P++ +T + T PLE + V + +E
Sbjct: 408 TRFTTPLPLERPVPAVTRLP--THLPLERPVPAVTRLPTHLPLEQPVPAVTRLPTHLPLE 465
Query: 470 R 472
R
Sbjct: 466 R 466
>SB_12331| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 748
Score = 31.9 bits (69), Expect = 0.60
Identities = 25/81 (30%), Positives = 35/81 (43%), Gaps = 3/81 (3%)
Frame = +1
Query: 520 PMESTEPENSLMSVSAEPLKMKDSLASISPEPLEVKDPLA---TVIPEQLEEKESVTTEP 690
P E E L PL+ ++ L PLE ++ L TV EQ E+ E T P
Sbjct: 643 PTVPLEQEQQLEDNPTVPLEQEEQLEDNPTVPLEQEEQLEDNPTVPLEQEEQLEDNPTVP 702
Query: 691 LEVKDSQASVTAEPLEVKDPL 753
LE ++ PLE ++ L
Sbjct: 703 LEQEEQLEDNPTVPLEQEEQL 723
Score = 31.1 bits (67), Expect = 1.0
Identities = 25/81 (30%), Positives = 34/81 (41%), Gaps = 3/81 (3%)
Frame = +1
Query: 520 PMESTEPENSLMSVSAEPLKMKDSLASISPEPLEVKDPLA---TVIPEQLEEKESVTTEP 690
P E E L PL+ + L PLE ++ L TV EQ E+ E T P
Sbjct: 629 PTVPLEQEEQLEDNPTVPLEQEQQLEDNPTVPLEQEEQLEDNPTVPLEQEEQLEDNPTVP 688
Query: 691 LEVKDSQASVTAEPLEVKDPL 753
LE ++ PLE ++ L
Sbjct: 689 LEQEEQLEDNPTVPLEQEEQL 709
Score = 30.3 bits (65), Expect = 1.8
Identities = 24/76 (31%), Positives = 32/76 (42%), Gaps = 3/76 (3%)
Frame = +1
Query: 520 PMESTEPENSLMSVSAEPLKMKDSLASISPEPLEVKDPLA---TVIPEQLEEKESVTTEP 690
P E E L PL+ ++ L PLE ++ L TV EQ E+ E T P
Sbjct: 657 PTVPLEQEEQLEDNPTVPLEQEEQLEDNPTVPLEQEEQLEDNPTVPLEQEEQLEDNPTVP 716
Query: 691 LEVKDSQASVTAEPLE 738
LE ++ PLE
Sbjct: 717 LEQEEQLEDNPTVPLE 732
>SB_50497| Best HMM Match : CH (HMM E-Value=0.0084)
Length = 2086
Score = 31.5 bits (68), Expect = 0.79
Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Frame = +2
Query: 320 PLPAEVP--LPRESPIPAESHIPVDDLITSIETPLESTIQEVASVDDQPEVEREKSDVPL 493
P P P L P P ES P DL T I PLE+ +V+D+ + E E+S P
Sbjct: 1516 PSPGGSPSDLSPTDPSPGESPHPEADLSTEIAPPLEAAPN---AVEDEAKPESERSGEPA 1572
Query: 494 E 496
+
Sbjct: 1573 D 1573
>SB_15028| Best HMM Match : Drf_FH1 (HMM E-Value=0.84)
Length = 944
Score = 31.5 bits (68), Expect = 0.79
Identities = 22/61 (36%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Frame = +2
Query: 320 PLPAEVP--LPRESPIPAESHIPVDDLITSIETPLESTIQEVASVDDQPEVEREKSDVPL 493
P P P L P P ES P DL T I PLE+ +V+D+ + E E+S P
Sbjct: 411 PSPGGSPSDLSPTDPSPGESPHPEADLSTEIAPPLEAAPN---AVEDEAKPESERSGEPA 467
Query: 494 E 496
+
Sbjct: 468 D 468
>SB_7420| Best HMM Match : Extensin_2 (HMM E-Value=0.061)
Length = 1354
Score = 31.5 bits (68), Expect = 0.79
Identities = 24/69 (34%), Positives = 32/69 (46%)
Frame = +2
Query: 296 TKDSRSNSPLPAEVPLPRESPIPAESHIPVDDLITSIETPLESTIQEVASVDDQPEVERE 475
T+D + LP PLP SP+ A H D E+P S + EV + DD P V
Sbjct: 502 TEDGQEQKGLPPPRPLP-PSPV-ARRHTHGD------ESPTSSLVPEVMTKDDHPAVHEV 553
Query: 476 KSDVPLEPV 502
+ P EP+
Sbjct: 554 STHHP-EPI 561
>SB_32577| Best HMM Match : PH (HMM E-Value=7e-17)
Length = 1248
Score = 31.5 bits (68), Expect = 0.79
Identities = 24/69 (34%), Positives = 32/69 (46%)
Frame = +2
Query: 296 TKDSRSNSPLPAEVPLPRESPIPAESHIPVDDLITSIETPLESTIQEVASVDDQPEVERE 475
T+D + LP PLP SP+ A H D E+P S + EV + DD P V
Sbjct: 281 TEDGQEQKGLPPPRPLP-PSPV-ARRHTHGD------ESPTSSLVPEVMTKDDHPAVHEV 332
Query: 476 KSDVPLEPV 502
+ P EP+
Sbjct: 333 STHHP-EPI 340
>SB_12442| Best HMM Match : zf-MYND (HMM E-Value=0.0028)
Length = 3809
Score = 31.1 bits (67), Expect = 1.0
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Frame = +1
Query: 520 PMESTEPENSLMSVSAEPLKMKDSLASISPEPLEVKDPLATVIPEQLE-EKESVTTEPLE 696
P ES EPE M+ E ++ + + PE E + T IPE++E E + +T P E
Sbjct: 1780 PKES-EPEVKPMTQIPEEIETEVKPMTQIPEEFETEVKPTTQIPEEIETEVKPMTQIPEE 1838
Query: 697 VKDSQASVTAEPLEVK 744
++ +T P E++
Sbjct: 1839 IETEVKPMTQIPEEIE 1854
>SB_41882| Best HMM Match : Amelogenin (HMM E-Value=2)
Length = 264
Score = 30.7 bits (66), Expect = 1.4
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = +2
Query: 362 PAESHIPVDDLITSIETPLESTIQEVASVDDQPEVEREKSDV 487
P + + P +L+TS E E +I +V++ D P++ + DV
Sbjct: 207 PGDENDPRSELVTSPEKKAEKSIDQVSTQGDSPDLMSDTPDV 248
>SB_30283| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1417
Score = 30.7 bits (66), Expect = 1.4
Identities = 20/77 (25%), Positives = 30/77 (38%), Gaps = 1/77 (1%)
Frame = +1
Query: 505 YEVVEPMESTEP-ENSLMSVSAEPLKMKDSLASISPEPLEVKDPLATVIPEQLEEKESVT 681
Y+ ++P ST P + S + S P+K S I P P P K S +
Sbjct: 1252 YKPIKPSPSTTPIKPSPSTTSTTPIKPSPSTNPIKPSPSTTSTTPIKPSPSTTPIKPSPS 1311
Query: 682 TEPLEVKDSQASVTAEP 732
T P++ S + P
Sbjct: 1312 TTPIKPSPSTTPIKPSP 1328
>SB_48933| Best HMM Match : Drf_FH1 (HMM E-Value=1.4)
Length = 611
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/48 (31%), Positives = 26/48 (54%)
Frame = -1
Query: 652 LELQSPKDPSLLAVLDLWTPENPSF*AVQQRLTSMNSPVLSIP*VLLP 509
LE++SP S+L+V ++ TP+ P A+Q +L +P + P
Sbjct: 8 LEIESPTTTSMLSVSEIATPDQPK--AIQPETPKDTPSMLPVPEIATP 53
>SB_47959| Best HMM Match : rve (HMM E-Value=3e-29)
Length = 622
Score = 30.3 bits (65), Expect = 1.8
Identities = 24/76 (31%), Positives = 32/76 (42%), Gaps = 3/76 (3%)
Frame = +1
Query: 520 PMESTEPENSLMSVSAEPLKMKDSLASISPEPLEVKDPLA---TVIPEQLEEKESVTTEP 690
P E E L PL+ ++ L PLE ++ L TV EQ E+ E T P
Sbjct: 426 PTVPLEQEEQLEDNPTVPLEQEEQLEDNPTVPLEQEEQLEDNPTVPLEQEEQLEDNPTVP 485
Query: 691 LEVKDSQASVTAEPLE 738
LE ++ PLE
Sbjct: 486 LEQEEQLEDNPTVPLE 501
Score = 29.5 bits (63), Expect = 3.2
Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
Frame = +1
Query: 541 ENSLMSVSAEPLKMKDSLASISPEPLEVKDPLA---TVIPEQLEEKESVTTEPLEVKDSQ 711
E L PL+ ++ L PLE ++ L TV EQ E+ E T PLE ++
Sbjct: 419 EEQLEDNPTVPLEQEEQLEDNPTVPLEQEEQLEDNPTVPLEQEEQLEDNPTVPLEQEEQL 478
Query: 712 ASVTAEPLEVKDPL 753
PLE ++ L
Sbjct: 479 EDNPTVPLEQEEQL 492
>SB_16977| Best HMM Match : Involucrin (HMM E-Value=0.012)
Length = 247
Score = 30.3 bits (65), Expect = 1.8
Identities = 24/76 (31%), Positives = 32/76 (42%), Gaps = 3/76 (3%)
Frame = +1
Query: 520 PMESTEPENSLMSVSAEPLKMKDSLASISPEPLEVKDPLA---TVIPEQLEEKESVTTEP 690
P E E L PL+ ++ L PLE ++ L TV EQ E+ E T P
Sbjct: 51 PTVPLEQEEQLEDNPTVPLEQEEQLEDNPTVPLEQEEQLEDNPTVPLEQEEQLEDNPTVP 110
Query: 691 LEVKDSQASVTAEPLE 738
LE ++ PLE
Sbjct: 111 LEQEEQLEDNPTVPLE 126
Score = 29.5 bits (63), Expect = 3.2
Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
Frame = +1
Query: 541 ENSLMSVSAEPLKMKDSLASISPEPLEVKDPLA---TVIPEQLEEKESVTTEPLEVKDSQ 711
E L PL+ ++ L PLE ++ L TV EQ E+ E T PLE ++
Sbjct: 44 EKQLEDNPTVPLEQEEQLEDNPTVPLEQEEQLEDNPTVPLEQEEQLEDNPTVPLEQEEQL 103
Query: 712 ASVTAEPLEVKDPL 753
PLE ++ L
Sbjct: 104 EDNPTVPLEQEEQL 117
>SB_3768| Best HMM Match : Involucrin (HMM E-Value=0.021)
Length = 205
Score = 30.3 bits (65), Expect = 1.8
Identities = 24/76 (31%), Positives = 32/76 (42%), Gaps = 3/76 (3%)
Frame = +1
Query: 520 PMESTEPENSLMSVSAEPLKMKDSLASISPEPLEVKDPLA---TVIPEQLEEKESVTTEP 690
P E E L PL+ ++ L PLE ++ L TV EQ E+ E T P
Sbjct: 120 PTVPLEQEEQLEDNPTVPLEQEEQLEDNPTVPLEQEEQLEDNPTVPLEQEEQLEDNPTVP 179
Query: 691 LEVKDSQASVTAEPLE 738
LE ++ PLE
Sbjct: 180 LEQEEQLEDNPTVPLE 195
Score = 29.5 bits (63), Expect = 3.2
Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
Frame = +1
Query: 541 ENSLMSVSAEPLKMKDSLASISPEPLEVKDPLA---TVIPEQLEEKESVTTEPLEVKDSQ 711
E L PL+ ++ L PLE ++ L TV EQ E+ E T PLE ++
Sbjct: 113 EEQLEDNPTVPLEQEEQLEDNPTVPLEQEEQLEDNPTVPLEQEEQLEDNPTVPLEQEEQL 172
Query: 712 ASVTAEPLEVKDPL 753
PLE ++ L
Sbjct: 173 EDNPTVPLEQEEQL 186
>SB_40415| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1512
Score = 29.9 bits (64), Expect = 2.4
Identities = 28/79 (35%), Positives = 37/79 (46%), Gaps = 11/79 (13%)
Frame = +2
Query: 281 ESVKVTKDSRSNSPLPAEVPLPRESP-------IPAESHIPVDDLITSIE----TPLEST 427
ES +VT+DSR++SP AE PRESP P SH V L + + L+ +
Sbjct: 1099 ESHRVTEDSRTSSP-DAEYS-PRESPRESLQQRTPRRSHSEVSRLPVKADRQHYSSLDLS 1156
Query: 428 IQEVASVDDQPEVEREKSD 484
E + D P RE D
Sbjct: 1157 SPETPTSSDFPSPRRESPD 1175
>SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30)
Length = 3071
Score = 29.1 bits (62), Expect = 4.2
Identities = 15/56 (26%), Positives = 30/56 (53%)
Frame = +1
Query: 580 MKDSLASISPEPLEVKDPLATVIPEQLEEKESVTTEPLEVKDSQASVTAEPLEVKD 747
++ ++ S+ E + LATV E + KES+ T ++++ ++ + EVKD
Sbjct: 1096 LESAVVSLKKERDQKSGDLATVKDEHRKAKESLVTAQNQLRERDRTINSLKKEVKD 1151
>SB_53857| Best HMM Match : DUF948 (HMM E-Value=5.2)
Length = 217
Score = 29.1 bits (62), Expect = 4.2
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +1
Query: 505 YEVVEPMESTEPE-NSLMSVSAEPLKMKDSLASISPEPLEVKDPLATVIPEQLEEK 669
Y +E +T+ NS++ VS L++ +S +S LEV +P V LE++
Sbjct: 59 YSTLEVSNTTQDVCNSMLEVSNSALEVSNSTLEVSNSTLEVCNPTLEVSNSTLEDE 114
>SB_24046| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2848
Score = 29.1 bits (62), Expect = 4.2
Identities = 17/55 (30%), Positives = 30/55 (54%)
Frame = +1
Query: 520 PMESTEPENSLMSVSAEPLKMKDSLASISPEPLEVKDPLATVIPEQLEEKESVTT 684
P+ E + S +SVS P D ++S + PL+ ++PLA + EK+ +T+
Sbjct: 1129 PVSQPEEKESDLSVSLVP--SDDEISSSAGPPLDDEEPLANDAHTSVPEKKPLTS 1181
>SB_7332| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1894
Score = 29.1 bits (62), Expect = 4.2
Identities = 24/94 (25%), Positives = 42/94 (44%), Gaps = 6/94 (6%)
Frame = +1
Query: 508 EVVEPMESTEPENSLMSVSAEPLKMKDSLASISPEPLEV------KDPLATVIPEQLEEK 669
E + +++T PE+ +AEPL D +SI PEP + L P ++
Sbjct: 1634 ETLSXIKNTSPESL---PAAEPLSTSDRSSSILPEPSTTDATTSHHESLPAAEPLSTTDR 1690
Query: 670 ESVTTEPLEVKDSQASVTAEPLEVKDPLASTNYS 771
S EP + A+ + E L +P ++++ S
Sbjct: 1691 SSTLPEP---STTDATTSHESLPAAEPFSTSDRS 1721
>SB_57304| Best HMM Match : SRP9 (HMM E-Value=0.7)
Length = 429
Score = 29.1 bits (62), Expect = 4.2
Identities = 14/55 (25%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +1
Query: 64 CLQKKHCFLLNVFYLKSLLYRR-NLHYQPRMLLLKRNLPFKQTIHFPQSMTTQYL 225
C++ + ++F ++S YR+ L Y+P ++ +P++ PQS T+ +L
Sbjct: 368 CIKDNQSHVRHMFRVESYTYRQLTLQYEPDRQNMRPLMPYRTFAVIPQSPTSVHL 422
>SB_47598| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2332
Score = 29.1 bits (62), Expect = 4.2
Identities = 20/65 (30%), Positives = 25/65 (38%)
Frame = +2
Query: 308 RSNSPLPAEVPLPRESPIPAESHIPVDDLITSIETPLESTIQEVASVDDQPEVEREKSDV 487
RS +P P P P+E P P S P + P+E I P V K
Sbjct: 938 RSPTPTPPPSPPPKE-PTPPPSSKPSPVKEIKPKKPIEKFISRPKPPTPPPVVSPHKQTR 996
Query: 488 PLEPV 502
P+ PV
Sbjct: 997 PISPV 1001
>SB_37985| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 586
Score = 29.1 bits (62), Expect = 4.2
Identities = 13/22 (59%), Positives = 17/22 (77%), Gaps = 2/22 (9%)
Frame = +3
Query: 186 DHPLPTVDDHPVSSPL--PVAT 245
DHPL T DHP+++PL P+AT
Sbjct: 325 DHPLATPLDHPLATPLDHPLAT 346
Score = 29.1 bits (62), Expect = 4.2
Identities = 13/22 (59%), Positives = 17/22 (77%), Gaps = 2/22 (9%)
Frame = +3
Query: 186 DHPLPTVDDHPVSSPL--PVAT 245
DHPL T DHP+++PL P+AT
Sbjct: 333 DHPLATPLDHPLATPLDHPLAT 354
>SB_24482| Best HMM Match : KID (HMM E-Value=0.045)
Length = 1714
Score = 29.1 bits (62), Expect = 4.2
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 621 SEGSFGDCNSRTARRKGVCNYGASRSEGLSSVCNC 725
SEG+ G ++ ARR+ + G S S G S++ C
Sbjct: 1072 SEGTRGHAPNKGARRRAQVSPGCSSSSGFSALAEC 1106
>SB_56224| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 798
Score = 28.7 bits (61), Expect = 5.5
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Frame = -3
Query: 650 GITVAKGSFTSSGSGLMDARESFILSGSAETDINEFSGSVDSIGST--TSYGPVRGGRRI 477
G+ GS ++G G S SGS T + G + + GS+ +S GG+ I
Sbjct: 197 GVGTTGGSTGAAGGGGGGTSTSTGSSGSTGTSMVTSGGGISTSGSSSGSSQSGASGGKTI 256
Query: 476 FLALL 462
F A+L
Sbjct: 257 FKAIL 261
>SB_39528| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1029
Score = 28.7 bits (61), Expect = 5.5
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
Frame = +1
Query: 541 ENSLMSVSAEPLKMKDSLASISPEPLEVKDPLA---TVIPEQLEEKESVTTEPLEVKDSQ 711
E L PL+ ++ L PLE ++ L TV E+ E+ E + T PLE ++
Sbjct: 890 EEQLEDNPTVPLEQEEQLEDNPTVPLEQEEQLEDNPTVPLEEEEQLEDIPTVPLEQEEQL 949
Query: 712 ASVTAEPLE 738
PLE
Sbjct: 950 EDNPKVPLE 958
>SB_34419| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 824
Score = 28.7 bits (61), Expect = 5.5
Identities = 25/83 (30%), Positives = 34/83 (40%)
Frame = +1
Query: 496 TGPYEVVEPMESTEPENSLMSVSAEPLKMKDSLASISPEPLEVKDPLATVIPEQLEEKES 675
TG + + P S PE L + +P K+ P+P+ K P TVI E+ E S
Sbjct: 290 TGDFIALGPKGSRPPETELKPL--QPPKL--------PQPVPPKKPAVTVIAERKRESTS 339
Query: 676 VTTEPLEVKDSQASVTAEPLEVK 744
T + AS PL K
Sbjct: 340 PLTPTAKRPKLLASPPYSPLSSK 362
>SB_31498| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 508
Score = 28.7 bits (61), Expect = 5.5
Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Frame = +2
Query: 278 DESVKVTKDSRSNSPLPAEVPLPRESPIPAESHIPVDDLI-TSIETPLESTIQEVASVDD 454
DE ++VT N + +PR+ + SHIP D+ + + P + ++ V S
Sbjct: 63 DEKLEVTSRIPRNEKVRVTSRIPRDEKVRVTSHIPRDEKVRVTSHIPRDEKVR-VTSHIP 121
Query: 455 QPEVEREKSDVP 490
+ E R S +P
Sbjct: 122 RDEKVRVTSHIP 133
Score = 28.3 bits (60), Expect = 7.3
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = +2
Query: 278 DESVKVTKDSRSNSPLPAEVPLPRESPIPAESHIPVDDLITSI 406
DE V+VT + + +PR+ + SHIP D+ + +
Sbjct: 99 DEKVRVTSHIPRDEKVRVTSHIPRDEKVRVTSHIPRDEKVVPV 141
>SB_25312| Best HMM Match : Vicilin_N (HMM E-Value=0.61)
Length = 219
Score = 28.7 bits (61), Expect = 5.5
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 3/69 (4%)
Frame = +1
Query: 541 ENSLMSVSAEPLKMKDSLASISPEPLEVKDPLA---TVIPEQLEEKESVTTEPLEVKDSQ 711
E L PL+ ++ L PLE ++ L TV E+ E+ E + T PLE ++
Sbjct: 113 EEQLEDNPTVPLEQEEQLEDNPTVPLEQEEQLEDNPTVPLEEEEQLEDIPTVPLEQEEQL 172
Query: 712 ASVTAEPLE 738
PLE
Sbjct: 173 EDNPKVPLE 181
>SB_52484| Best HMM Match : AbfB (HMM E-Value=0.011)
Length = 782
Score = 28.7 bits (61), Expect = 5.5
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Frame = -3
Query: 650 GITVAKGSFTSSGSGLMDARESFILSGSAETDINEFSGSVDSIGST--TSYGPVRGGRRI 477
G+ GS ++G G S SGS T + G + + GS+ +S GG+ I
Sbjct: 243 GVGTTGGSTGAAGGGGGGTSTSTGSSGSTGTSMVTSGGGISTSGSSSGSSQSGASGGKTI 302
Query: 476 FLALL 462
F A+L
Sbjct: 303 FKAIL 307
>SB_24023| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1268
Score = 28.7 bits (61), Expect = 5.5
Identities = 13/48 (27%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +2
Query: 323 LPAEVPLPR-ESPIPAESHIPVDDLITSIETPLESTIQEVASVDDQPE 463
+P +P+P+ ++ I IPV + T+I+ P + + +V + D P+
Sbjct: 225 MPGPIPVPKVQTTIDMPGPIPVPKVQTNIDMPGPTPVPKVQATIDMPD 272
Score = 28.7 bits (61), Expect = 5.5
Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +2
Query: 287 VKVTKDSRSNSPLPAEVPLPR-ESPIPAESHIPVDDLITSIETPLESTIQEVASVDDQPE 463
V+ T D +P P+P+ ++ I IPV + T+I+ P + + +V + D P+
Sbjct: 384 VQTTIDMPGPIDMPDPTPVPKVQTTIDMPDPIPVPKVQTTIDMPGPTPVPKVQTTIDMPD 443
Score = 28.3 bits (60), Expect = 7.3
Identities = 14/53 (26%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +2
Query: 308 RSNSPLPAEVPLPR-ESPIPAESHIPVDDLITSIETPLESTIQEVASVDDQPE 463
++N +P P+P+ ++ I IPV + T+I+ P + +V + D P+
Sbjct: 250 QTNIDMPGPTPVPKVQATIDMPDPIPVPKVQTTIDMPDPIPVPKVQTTIDMPD 302
>SB_9150| Best HMM Match : PspA_IM30 (HMM E-Value=0.98)
Length = 242
Score = 28.7 bits (61), Expect = 5.5
Identities = 18/71 (25%), Positives = 34/71 (47%)
Frame = +2
Query: 281 ESVKVTKDSRSNSPLPAEVPLPRESPIPAESHIPVDDLITSIETPLESTIQEVASVDDQP 460
E V+ + + S AEVP+ + P ++ PV++ TS E E+ +E +
Sbjct: 54 EEVEAPMEEAAASVEEAEVPIEKAETQPVDTEGPVENAETSFE-EAEAADEETEEPVKEA 112
Query: 461 EVEREKSDVPL 493
E E+++ P+
Sbjct: 113 EGSFEEAEAPV 123
>SB_5589| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 583
Score = 28.7 bits (61), Expect = 5.5
Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Frame = +2
Query: 317 SPLPAEVPLPRESPIPAESHIPVDDLITSIETPLESTI-QEVASVDDQP 460
+P+ +P P +P +E D L+T TP +S++ QE+ S++ +P
Sbjct: 127 TPVTTPIPTPVYTPPESEISESPDALVTPALTPSQSSMSQEMDSMETEP 175
>SB_2799| Best HMM Match : rve (HMM E-Value=7.8e-26)
Length = 1058
Score = 28.3 bits (60), Expect = 7.3
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = -3
Query: 632 GSFTSSGSGLMDARESFILSGSAETDINEFSGSVDSIGSTTSYGPVRG 489
GS G G D +ES++ S S++ + S S+ G TT G +G
Sbjct: 69 GSKEEGGEGKEDDQESYLPSSSSDLLQSGASSSLGGSGQTTPSGTFQG 116
>SB_39858| Best HMM Match : Spectrin (HMM E-Value=2.6e-05)
Length = 3397
Score = 27.9 bits (59), Expect = 9.7
Identities = 29/106 (27%), Positives = 50/106 (47%), Gaps = 13/106 (12%)
Frame = +1
Query: 496 TGPYEVVEPMESTEPENSLMSVSAEP-LKMKDSLASISPEPLEVK--------DPL-ATV 645
TGP V++P+ +E E +++ +P L ++ P+ V+ DP+ +TV
Sbjct: 951 TGPSFVIQPVRRSELEQFNVALPEKPVLDQSIPTEDVTVVPIGVEHRSRPIEGDPITSTV 1010
Query: 646 IP-EQLEEKESVTTEPLEVKDSQASVTAEP--LEVKDPLASTNYSK 774
P E+ E K P++ D +A A P EVK+ + T Y +
Sbjct: 1011 TPSEKPESKILFNLTPVKKSDLEAFQVAMPHEREVKEIPSETQYEE 1056
>SB_19534| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 148
Score = 27.9 bits (59), Expect = 9.7
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = +2
Query: 278 DESVKVTKDSRSNSPLPAEVPLPRESPIPAESHIPVDDLITS 403
D+ + ++ + +P++ R+ IP++SH DD ITS
Sbjct: 33 DDGIPSDSNATRDDGIPSDSNATRDDGIPSDSHATRDDGITS 74
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,501,117
Number of Sequences: 59808
Number of extensions: 403805
Number of successful extensions: 1764
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1362
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1712
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2119930593
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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