Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20280
         (778 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic acetylch...    27   0.49 
AY176050-1|AAO19581.1|  522|Anopheles gambiae cytochrome P450 CY...    26   1.1  
AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox prote...    24   4.6  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            24   6.0  
AB090814-1|BAC57903.1|  499|Anopheles gambiae gag-like protein p...    24   6.0  
M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles ...    23   8.0  

>AY705405-1|AAU12514.1|  519|Anopheles gambiae nicotinic
           acetylcholine receptor subunitbeta 1 protein.
          Length = 519

 Score = 27.5 bits (58), Expect = 0.49
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +1

Query: 133 LHYQPRMLLLKRNLPFKQTIHFPQSMTTQYLPP 231
           LHY P MLL+KR  P K  + +   M    +PP
Sbjct: 338 LHYLPAMLLMKR--PRKTRLRWMMEMPGMSVPP 368


>AY176050-1|AAO19581.1|  522|Anopheles gambiae cytochrome P450
           CYP12F2 protein.
          Length = 522

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = -2

Query: 717 RRLRVLHFERLRSYRLLFFELFWNYSRQRILHF 619
           RRL ++  E + +  +  FEL WNY +   LHF
Sbjct: 472 RRLAMMELEMITARLVRQFELRWNYDK---LHF 501


>AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox protein
           protein.
          Length = 338

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +3

Query: 645 NSRTARRKGVCNYGASRSEGLSS 713
           N R  R+KG   +GA  S G+SS
Sbjct: 246 NRRVKRKKGDAPFGAELSGGVSS 268


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.8 bits (49), Expect = 6.0
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +1

Query: 121  YRRNLHYQPRMLLLKRNLPFKQTIH 195
            Y+R+  Y+P  LLL    P ++  H
Sbjct: 1805 YKRSYSYEPHNLLLSNLFPPREGFH 1829


>AB090814-1|BAC57903.1|  499|Anopheles gambiae gag-like protein
           protein.
          Length = 499

 Score = 23.8 bits (49), Expect = 6.0
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = +3

Query: 468 SEKNPTSPSNRSVRGSRTYGID 533
           S K P SP N +V+GS +  +D
Sbjct: 57  SSKTPRSPPNDNVQGSVSPAVD 78


>M93691-2|AAA29365.1| 1222|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 1222

 Score = 23.4 bits (48), Expect = 8.0
 Identities = 11/38 (28%), Positives = 18/38 (47%)
 Frame = -3

Query: 539 GSVDSIGSTTSYGPVRGGRRIFLALLRADHQQKPLPGL 426
           GSV+   +T    PV     + +A   A+H+   L G+
Sbjct: 459 GSVEGATTTAGIAPVTDDELLLIASQMANHKAPGLDGI 496


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 684,579
Number of Sequences: 2352
Number of extensions: 12641
Number of successful extensions: 19
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81081585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)