Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20280
(778 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
S74659-1|AAC60643.2| 102|Homo sapiens aggrecan keratan sulfate ... 37 0.093
M55172-1|AAA62824.1| 2316|Homo sapiens large aggregating cartila... 37 0.093
AK128235-1|BAC87345.1| 221|Homo sapiens protein ( Homo sapiens ... 33 0.87
U48736-1|AAB03268.1| 496|Homo sapiens serine/threonine-protein ... 33 1.5
BC034969-1|AAH34969.1| 1007|Homo sapiens PRP4 pre-mRNA processin... 33 1.5
BC009844-1|AAH09844.1| 496|Homo sapiens PRPF4B protein protein. 33 1.5
BC009107-1|AAH09107.1| 879|Homo sapiens microtubule associated ... 33 1.5
AY029347-1|AAK38155.1| 1007|Homo sapiens serine/threonine-protei... 33 1.5
AL160291-7|CAI16908.1| 878|Homo sapiens novel protein kinase do... 33 1.5
AL160291-6|CAI16909.1| 879|Homo sapiens novel protein kinase do... 33 1.5
AL160291-5|CAI16910.1| 840|Homo sapiens novel protein kinase do... 33 1.5
AL138831-3|CAI20480.1| 1007|Homo sapiens PRP4 pre-mRNA processin... 33 1.5
AL033383-1|CAI42121.1| 1007|Homo sapiens PRP4 pre-mRNA processin... 33 1.5
AK074804-1|BAC11218.1| 840|Homo sapiens protein ( Homo sapiens ... 33 1.5
AK027719-1|BAB55321.1| 878|Homo sapiens protein ( Homo sapiens ... 33 1.5
AF283465-1|AAM19101.1| 1007|Homo sapiens PRP4 kinase protein. 33 1.5
AB011108-1|BAA25462.1| 1028|Homo sapiens KIAA0536 protein protein. 33 1.5
AJ277892-3|CAD12457.1| 5604|Homo sapiens Novex-3 Titin Isoform p... 31 3.5
AC023270-1|AAX88844.1| 5604|Homo sapiens unknown protein. 31 3.5
D87073-1|BAA13242.2| 1696|Homo sapiens KIAA0236 protein. 31 4.6
BC098143-1|AAH98143.1| 214|Homo sapiens VCX3B protein protein. 31 4.6
X15306-1|CAA33366.1| 1020|Homo sapiens heavy neurofilament subun... 31 6.1
BC073969-1|AAH73969.1| 1026|Homo sapiens NEFH protein protein. 31 6.1
AK131454-1|BAD18599.1| 945|Homo sapiens protein ( Homo sapiens ... 31 6.1
AF203032-1|AAF13722.1| 1026|Homo sapiens neurofilament protein p... 31 6.1
AB051500-1|BAB21804.2| 1652|Homo sapiens KIAA1713 protein protein. 31 6.1
AB020652-1|BAA74868.2| 1034|Homo sapiens KIAA0845 protein protein. 31 6.1
X64318-1|CAA45597.1| 462|Homo sapiens E4BP4 protein. 30 8.1
U26173-1|AAA93067.1| 462|Homo sapiens NF-IL3A protein. 30 8.1
S79880-1|AAB35410.1| 462|Homo sapiens NF-IL3A protein. 30 8.1
EF028070-1|ABK15691.1| 462|Homo sapiens nuclear factor interleu... 30 8.1
CR542049-1|CAG46846.1| 462|Homo sapiens NFIL3 protein. 30 8.1
BC126155-1|AAI26156.1| 945|Homo sapiens FLJ23861 protein protein. 30 8.1
BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetit... 30 8.1
BC032837-1|AAH32837.1| 705|Homo sapiens FLJ23861 protein protein. 30 8.1
BC008197-1|AAH08197.1| 462|Homo sapiens nuclear factor, interle... 30 8.1
AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetit... 30 8.1
AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetit... 30 8.1
AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetit... 30 8.1
AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetit... 30 8.1
AL353764-1|CAH73854.1| 462|Homo sapiens nuclear factor, interle... 30 8.1
AK056911-1|BAB71308.1| 705|Homo sapiens protein ( Homo sapiens ... 30 8.1
AF536542-1|AAN77183.1| 916|Homo sapiens SR-related CTD associat... 30 8.1
AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear... 30 8.1
AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear... 30 8.1
AC006994-1|AAY14880.1| 585|Homo sapiens unknown protein. 30 8.1
>S74659-1|AAC60643.2| 102|Homo sapiens aggrecan keratan sulfate
domain protein.
Length = 102
Score = 36.7 bits (81), Expect = 0.093
Identities = 22/65 (33%), Positives = 29/65 (44%)
Frame = +2
Query: 305 SRSNSPLPAEVPLPRESPIPAESHIPVDDLITSIETPLESTIQEVASVDDQPEVEREKSD 484
S S P P+EVP P E P P+E P S+E L + + S + P E S+
Sbjct: 18 SASEEPSPSEVPFPSEEPSPSEEPFPSVRPFPSVE--LFPSEEPFPSKEPSPSEEPSASE 75
Query: 485 VPLEP 499
P P
Sbjct: 76 EPYTP 80
>M55172-1|AAA62824.1| 2316|Homo sapiens large aggregating cartilage
proteoglycan core protein protein.
Length = 2316
Score = 36.7 bits (81), Expect = 0.093
Identities = 22/65 (33%), Positives = 29/65 (44%)
Frame = +2
Query: 305 SRSNSPLPAEVPLPRESPIPAESHIPVDDLITSIETPLESTIQEVASVDDQPEVEREKSD 484
S S P P+EVP P E P P+E P S+E L + + S + P E S+
Sbjct: 781 SASEEPSPSEVPFPSEEPSPSEEPFPSVRPFPSVE--LFPSEEPFPSKEPSPSEEPSASE 838
Query: 485 VPLEP 499
P P
Sbjct: 839 EPYTP 843
>AK128235-1|BAC87345.1| 221|Homo sapiens protein ( Homo sapiens
cDNA FLJ46369 fis, clone TESTI4051747. ).
Length = 221
Score = 33.5 bits (73), Expect = 0.87
Identities = 22/90 (24%), Positives = 37/90 (41%)
Frame = +1
Query: 502 PYEVVEPMESTEPENSLMSVSAEPLKMKDSLASISPEPLEVKDPLATVIPEQLEEKESVT 681
P E EP + EP + S PLK S ++P P + + PE++E +
Sbjct: 109 PAEPTEPAKEVEPSATQQEASGHPLK---STKEVNPPPKQEIPAQPSEPPEKVELSPVLQ 165
Query: 682 TEPLEVKDSQASVTAEPLEVKDPLASTNYS 771
P ++ + V P++ P S+ S
Sbjct: 166 QAPTQLLEPLKKVECSPVQQAVPAQSSEPS 195
>U48736-1|AAB03268.1| 496|Homo sapiens serine/threonine-protein
kinase PRP4h protein.
Length = 496
Score = 32.7 bits (71), Expect = 1.5
Identities = 21/63 (33%), Positives = 33/63 (52%)
Frame = +1
Query: 541 ENSLMSVSAEPLKMKDSLASISPEPLEVKDPLATVIPEQLEEKESVTTEPLEVKDSQASV 720
E+S MSV +EP + S + SP P ++ + +A + E E+E+V T VK +
Sbjct: 46 EDSNMSVPSEPSSPQSSTRTRSPSPDDILERVAADVKEY--ERENVDTFEASVKAKHNLM 103
Query: 721 TAE 729
T E
Sbjct: 104 TVE 106
>BC034969-1|AAH34969.1| 1007|Homo sapiens PRP4 pre-mRNA processing
factor 4 homolog B (yeast) protein.
Length = 1007
Score = 32.7 bits (71), Expect = 1.5
Identities = 21/63 (33%), Positives = 33/63 (52%)
Frame = +1
Query: 541 ENSLMSVSAEPLKMKDSLASISPEPLEVKDPLATVIPEQLEEKESVTTEPLEVKDSQASV 720
E+S MSV +EP + S + SP P ++ + +A + E E+E+V T VK +
Sbjct: 557 EDSNMSVPSEPSSPQSSTRTRSPSPDDILERVAADVKEY--ERENVDTFEASVKAKHNLM 614
Query: 721 TAE 729
T E
Sbjct: 615 TVE 617
>BC009844-1|AAH09844.1| 496|Homo sapiens PRPF4B protein protein.
Length = 496
Score = 32.7 bits (71), Expect = 1.5
Identities = 21/63 (33%), Positives = 33/63 (52%)
Frame = +1
Query: 541 ENSLMSVSAEPLKMKDSLASISPEPLEVKDPLATVIPEQLEEKESVTTEPLEVKDSQASV 720
E+S MSV +EP + S + SP P ++ + +A + E E+E+V T VK +
Sbjct: 46 EDSNMSVPSEPSSPQSSTRTRSPSPDDILERVAADVKEY--ERENVDTFEASVKAKHNLM 103
Query: 721 TAE 729
T E
Sbjct: 104 TVE 106
>BC009107-1|AAH09107.1| 879|Homo sapiens microtubule associated
serine/threonine kinase-like protein.
Length = 879
Score = 32.7 bits (71), Expect = 1.5
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Frame = +1
Query: 526 ESTEPENSLMS--VSAEPLKMKDSLASISPEPLEVKDPLATVIPEQLEEKESVTTEPLEV 699
+S+ P S+M + ++PL S+ S E ++DPL V P+ E+ E V
Sbjct: 570 DSSFPGISIMESPLESQPLDSDRSIKESSFEESNIEDPLI-VTPDCQEKTSPKGVENPAV 628
Query: 700 KDSQASVTAEPLEVKDPLAS 759
++S + PLEV LAS
Sbjct: 629 QESNQKMLGPPLEVLKTLAS 648
>AY029347-1|AAK38155.1| 1007|Homo sapiens serine/threonine-protein
kinase protein.
Length = 1007
Score = 32.7 bits (71), Expect = 1.5
Identities = 21/63 (33%), Positives = 33/63 (52%)
Frame = +1
Query: 541 ENSLMSVSAEPLKMKDSLASISPEPLEVKDPLATVIPEQLEEKESVTTEPLEVKDSQASV 720
E+S MSV +EP + S + SP P ++ + +A + E E+E+V T VK +
Sbjct: 557 EDSNMSVPSEPSSPQSSTRTRSPSPDDILERVAADVKEY--ERENVDTFEASVKAKHNLM 614
Query: 721 TAE 729
T E
Sbjct: 615 TVE 617
>AL160291-7|CAI16908.1| 878|Homo sapiens novel protein kinase
domain containing protein protein.
Length = 878
Score = 32.7 bits (71), Expect = 1.5
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Frame = +1
Query: 526 ESTEPENSLMS--VSAEPLKMKDSLASISPEPLEVKDPLATVIPEQLEEKESVTTEPLEV 699
+S+ P S+M + ++PL S+ S E ++DPL V P+ E+ E V
Sbjct: 570 DSSFPGISIMESPLESQPLDSDRSIKESSFEESNIEDPLI-VTPDCQEKTSPKGVENPAV 628
Query: 700 KDSQASVTAEPLEVKDPLAS 759
++S + PLEV LAS
Sbjct: 629 QESNQKMLGPPLEVLKTLAS 648
>AL160291-6|CAI16909.1| 879|Homo sapiens novel protein kinase
domain containing protein protein.
Length = 879
Score = 32.7 bits (71), Expect = 1.5
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Frame = +1
Query: 526 ESTEPENSLMS--VSAEPLKMKDSLASISPEPLEVKDPLATVIPEQLEEKESVTTEPLEV 699
+S+ P S+M + ++PL S+ S E ++DPL V P+ E+ E V
Sbjct: 570 DSSFPGISIMESPLESQPLDSDRSIKESSFEESNIEDPLI-VTPDCQEKTSPKGVENPAV 628
Query: 700 KDSQASVTAEPLEVKDPLAS 759
++S + PLEV LAS
Sbjct: 629 QESNQKMLGPPLEVLKTLAS 648
>AL160291-5|CAI16910.1| 840|Homo sapiens novel protein kinase
domain containing protein protein.
Length = 840
Score = 32.7 bits (71), Expect = 1.5
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Frame = +1
Query: 526 ESTEPENSLMS--VSAEPLKMKDSLASISPEPLEVKDPLATVIPEQLEEKESVTTEPLEV 699
+S+ P S+M + ++PL S+ S E ++DPL V P+ E+ E V
Sbjct: 570 DSSFPGISIMESPLESQPLDSDRSIKESSFEESNIEDPLI-VTPDCQEKTSPKGVENPAV 628
Query: 700 KDSQASVTAEPLEVKDPLAS 759
++S + PLEV LAS
Sbjct: 629 QESNQKMLGPPLEVLKTLAS 648
>AL138831-3|CAI20480.1| 1007|Homo sapiens PRP4 pre-mRNA processing
factor 4 homolog B (yeast) protein.
Length = 1007
Score = 32.7 bits (71), Expect = 1.5
Identities = 21/63 (33%), Positives = 33/63 (52%)
Frame = +1
Query: 541 ENSLMSVSAEPLKMKDSLASISPEPLEVKDPLATVIPEQLEEKESVTTEPLEVKDSQASV 720
E+S MSV +EP + S + SP P ++ + +A + E E+E+V T VK +
Sbjct: 557 EDSNMSVPSEPSSPQSSTRTRSPSPDDILERVAADVKEY--ERENVDTFEASVKAKHNLM 614
Query: 721 TAE 729
T E
Sbjct: 615 TVE 617
>AL033383-1|CAI42121.1| 1007|Homo sapiens PRP4 pre-mRNA processing
factor 4 homolog B (yeast) protein.
Length = 1007
Score = 32.7 bits (71), Expect = 1.5
Identities = 21/63 (33%), Positives = 33/63 (52%)
Frame = +1
Query: 541 ENSLMSVSAEPLKMKDSLASISPEPLEVKDPLATVIPEQLEEKESVTTEPLEVKDSQASV 720
E+S MSV +EP + S + SP P ++ + +A + E E+E+V T VK +
Sbjct: 557 EDSNMSVPSEPSSPQSSTRTRSPSPDDILERVAADVKEY--ERENVDTFEASVKAKHNLM 614
Query: 721 TAE 729
T E
Sbjct: 615 TVE 617
>AK074804-1|BAC11218.1| 840|Homo sapiens protein ( Homo sapiens
cDNA FLJ90323 fis, clone NT2RP2001769, weakly similar to
SERINE/THREONINE-PROTEIN KINASE ORB6 (EC 2.7.1.-). ).
Length = 840
Score = 32.7 bits (71), Expect = 1.5
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Frame = +1
Query: 526 ESTEPENSLMS--VSAEPLKMKDSLASISPEPLEVKDPLATVIPEQLEEKESVTTEPLEV 699
+S+ P S+M + ++PL S+ S E ++DPL V P+ E+ E V
Sbjct: 570 DSSFPGISIMESPLESQPLDSDRSIKESSFEESNIEDPLI-VTPDCQEKTSPKGVENPAV 628
Query: 700 KDSQASVTAEPLEVKDPLAS 759
++S + PLEV LAS
Sbjct: 629 QESNQEMLGPPLEVLKTLAS 648
>AK027719-1|BAB55321.1| 878|Homo sapiens protein ( Homo sapiens
cDNA FLJ14813 fis, clone NT2RP4002408, moderately
similar to PROTEIN KINASE CEK1 (EC 2.7.1.-). ).
Length = 878
Score = 32.7 bits (71), Expect = 1.5
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 2/80 (2%)
Frame = +1
Query: 526 ESTEPENSLMS--VSAEPLKMKDSLASISPEPLEVKDPLATVIPEQLEEKESVTTEPLEV 699
+S+ P S+M + ++PL S+ S E ++DPL V P+ E+ E V
Sbjct: 570 DSSFPGISIMESPLESQPLDSDRSIKESSFEESNIEDPLI-VTPDCQEKTSPKGVENPAV 628
Query: 700 KDSQASVTAEPLEVKDPLAS 759
++S + PLEV LAS
Sbjct: 629 QESNQKMLGPPLEVLKTLAS 648
>AF283465-1|AAM19101.1| 1007|Homo sapiens PRP4 kinase protein.
Length = 1007
Score = 32.7 bits (71), Expect = 1.5
Identities = 21/63 (33%), Positives = 33/63 (52%)
Frame = +1
Query: 541 ENSLMSVSAEPLKMKDSLASISPEPLEVKDPLATVIPEQLEEKESVTTEPLEVKDSQASV 720
E+S MSV +EP + S + SP P ++ + +A + E E+E+V T VK +
Sbjct: 557 EDSNMSVPSEPSSPQSSTRTRSPSPDDILERVAADVKEY--ERENVDTFEASVKAKHNLM 614
Query: 721 TAE 729
T E
Sbjct: 615 TVE 617
>AB011108-1|BAA25462.1| 1028|Homo sapiens KIAA0536 protein protein.
Length = 1028
Score = 32.7 bits (71), Expect = 1.5
Identities = 21/63 (33%), Positives = 33/63 (52%)
Frame = +1
Query: 541 ENSLMSVSAEPLKMKDSLASISPEPLEVKDPLATVIPEQLEEKESVTTEPLEVKDSQASV 720
E+S MSV +EP + S + SP P ++ + +A + E E+E+V T VK +
Sbjct: 578 EDSNMSVPSEPSSPQSSTRTRSPSPDDILERVAADVKEY--ERENVDTFEASVKAKHNLM 635
Query: 721 TAE 729
T E
Sbjct: 636 TVE 638
>AJ277892-3|CAD12457.1| 5604|Homo sapiens Novex-3 Titin Isoform
protein.
Length = 5604
Score = 31.5 bits (68), Expect = 3.5
Identities = 25/73 (34%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
Frame = +1
Query: 520 PMESTEPENSLMSVSAEPLKMKDSLASISPEPLEVKDPLATVIPEQ-LEEKESVTTEPLE 696
P S E + +L + P + P+E++ AT IPEQ E KE TE LE
Sbjct: 4071 PSMSQEGQTNLHLLKTNPPVPPSGDTELLSFPVEIQVTAATPIPEQDKESKEVFQTEELE 4130
Query: 697 VKD-SQASVTAEP 732
K Q VT P
Sbjct: 4131 PKAMPQDQVTQSP 4143
>AC023270-1|AAX88844.1| 5604|Homo sapiens unknown protein.
Length = 5604
Score = 31.5 bits (68), Expect = 3.5
Identities = 25/73 (34%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
Frame = +1
Query: 520 PMESTEPENSLMSVSAEPLKMKDSLASISPEPLEVKDPLATVIPEQ-LEEKESVTTEPLE 696
P S E + +L + P + P+E++ AT IPEQ E KE TE LE
Sbjct: 4071 PSMSQEGQTNLHLLKTNPPVPPSGDTELLSFPVEIQVTAATPIPEQDKESKEVFQTEELE 4130
Query: 697 VKD-SQASVTAEP 732
K Q VT P
Sbjct: 4131 PKAMPQDQVTQSP 4143
>D87073-1|BAA13242.2| 1696|Homo sapiens KIAA0236 protein.
Length = 1696
Score = 31.1 bits (67), Expect = 4.6
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +1
Query: 604 SPEPLEVKDPLATVIPEQLE-EKESVTTEPLEVKDSQASVTAEPLEVKDP 750
SP P EV++ T+ E L E ESVT PLE A + PL ++ P
Sbjct: 691 SPSPAEVEEGSCTLHLEALGVELESVTEPPLEEVTETAPMEFRPLGLEGP 740
>BC098143-1|AAH98143.1| 214|Homo sapiens VCX3B protein protein.
Length = 214
Score = 31.1 bits (67), Expect = 4.6
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 2/82 (2%)
Frame = +1
Query: 517 EPMESTEPENSLMSVSAEPLKMKDSLASISPEPLEVKDPLA--TVIPEQLEEKESVTTEP 690
EP+ E S S EPL + + + +V++PL+ + + E L + ES EP
Sbjct: 93 EPVSEVEEPLSQESQVEEPLSQESEMEEPLSQESQVEEPLSQESEVEEPLSQ-ESQVEEP 151
Query: 691 LEVKDSQASVTAEPLEVKDPLA 756
L + ++ +V++PL+
Sbjct: 152 LSQESEVEEPLSQESQVEEPLS 173
>X15306-1|CAA33366.1| 1020|Homo sapiens heavy neurofilament subunit
protein.
Length = 1020
Score = 30.7 bits (66), Expect = 6.1
Identities = 24/82 (29%), Positives = 32/82 (39%), Gaps = 1/82 (1%)
Frame = +1
Query: 508 EVVEPMESTEPENSLMSVSAEPLKMKDSLASISPEPLEVKDPLATVIPEQLEEKESVTTE 687
E P E+ PE + P ++K + SP E K P PE+ E K +
Sbjct: 523 EAKSPAEAKSPEKE---EAKSPAEVKSPEKAKSPAKEEAKSPPEAKSPEKEEAKSPAEVK 579
Query: 688 PLEVKDSQASVTAE-PLEVKDP 750
E S A A+ P E K P
Sbjct: 580 SPEKAKSPAKEEAKSPAEAKSP 601
>BC073969-1|AAH73969.1| 1026|Homo sapiens NEFH protein protein.
Length = 1026
Score = 30.7 bits (66), Expect = 6.1
Identities = 24/82 (29%), Positives = 32/82 (39%), Gaps = 1/82 (1%)
Frame = +1
Query: 508 EVVEPMESTEPENSLMSVSAEPLKMKDSLASISPEPLEVKDPLATVIPEQLEEKESVTTE 687
E P E+ PE + P ++K + SP E K P PE+ E K +
Sbjct: 523 EAKSPAEAKSPEKE---EAKSPAEVKSPEKAKSPAKEEAKSPPEAKSPEKEEAKSPAEVK 579
Query: 688 PLEVKDSQASVTAE-PLEVKDP 750
E S A A+ P E K P
Sbjct: 580 SPEKAKSPAKEEAKSPAEAKSP 601
>AK131454-1|BAD18599.1| 945|Homo sapiens protein ( Homo sapiens
cDNA FLJ16608 fis, clone TESTI4011070. ).
Length = 945
Score = 30.7 bits (66), Expect = 6.1
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Frame = +1
Query: 520 PMESTEPENSLMSVSAEPLKMKDSLASISPEPLEVKDPLATVIPEQLEEKE----SVTTE 687
PM + SVS+ L + + S P P E + I E++ ++ SV+ E
Sbjct: 425 PMSDLPLTSKTSSVSSMLLTSETTFVSSLPLPSETSPISNSSINERMAHQQRKSPSVSEE 484
Query: 688 PLEVKDSQASVTAEPL 735
PL + ++S TA+PL
Sbjct: 485 PLSPQKDESSATAKPL 500
>AF203032-1|AAF13722.1| 1026|Homo sapiens neurofilament protein
protein.
Length = 1026
Score = 30.7 bits (66), Expect = 6.1
Identities = 24/82 (29%), Positives = 32/82 (39%), Gaps = 1/82 (1%)
Frame = +1
Query: 508 EVVEPMESTEPENSLMSVSAEPLKMKDSLASISPEPLEVKDPLATVIPEQLEEKESVTTE 687
E P E+ PE + P ++K + SP E K P PE+ E K +
Sbjct: 523 EAKSPAEAKSPEKE---EAKSPAEVKSPEKAKSPAKEEAKSPPEAKSPEKEEAKSPAEVK 579
Query: 688 PLEVKDSQASVTAE-PLEVKDP 750
E S A A+ P E K P
Sbjct: 580 SPEKAKSPAKEEAKSPAEAKSP 601
>AB051500-1|BAB21804.2| 1652|Homo sapiens KIAA1713 protein protein.
Length = 1652
Score = 30.7 bits (66), Expect = 6.1
Identities = 22/76 (28%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Frame = +1
Query: 520 PMESTEPENSLMSVSAEPLKMKDSLASISPEPLEVKDPLATVIPEQLEEKE----SVTTE 687
PM + SVS+ L + + S P P E + I E++ ++ SV+ E
Sbjct: 122 PMSDLPLTSETSSVSSMLLTSETTFVSSLPLPSETSPISNSSINERMAHQQRKSPSVSEE 181
Query: 688 PLEVKDSQASVTAEPL 735
PL + ++S TA+PL
Sbjct: 182 PLSPQKDESSATAKPL 197
>AB020652-1|BAA74868.2| 1034|Homo sapiens KIAA0845 protein protein.
Length = 1034
Score = 30.7 bits (66), Expect = 6.1
Identities = 24/82 (29%), Positives = 32/82 (39%), Gaps = 1/82 (1%)
Frame = +1
Query: 508 EVVEPMESTEPENSLMSVSAEPLKMKDSLASISPEPLEVKDPLATVIPEQLEEKESVTTE 687
E P E+ PE + P ++K + SP E K P PE+ E K +
Sbjct: 531 EAKSPAEAKSPEKE---EAKSPAEVKSPEKAKSPAKEEAKSPPEAKSPEKEEAKSPAEVK 587
Query: 688 PLEVKDSQASVTAE-PLEVKDP 750
E S A A+ P E K P
Sbjct: 588 SPEKAKSPAKEEAKSPAEAKSP 609
>X64318-1|CAA45597.1| 462|Homo sapiens E4BP4 protein.
Length = 462
Score = 30.3 bits (65), Expect = 8.1
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +1
Query: 574 LKMKDSLASIS-PEPLEVKDPLATVIPEQLEEKESVTTEPLEVKDS 708
++MKDS +S PE L +K +A + E + K + T+P+ DS
Sbjct: 416 VEMKDSGYKVSDPENLYLKQGIANLSAEVVSLKRLIATQPISASDS 461
>U26173-1|AAA93067.1| 462|Homo sapiens NF-IL3A protein.
Length = 462
Score = 30.3 bits (65), Expect = 8.1
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +1
Query: 574 LKMKDSLASIS-PEPLEVKDPLATVIPEQLEEKESVTTEPLEVKDS 708
++MKDS +S PE L +K +A + E + K + T+P+ DS
Sbjct: 416 VEMKDSGYKVSDPENLYLKQGIANLSAEVVSLKRLIATQPISASDS 461
>S79880-1|AAB35410.1| 462|Homo sapiens NF-IL3A protein.
Length = 462
Score = 30.3 bits (65), Expect = 8.1
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +1
Query: 574 LKMKDSLASIS-PEPLEVKDPLATVIPEQLEEKESVTTEPLEVKDS 708
++MKDS +S PE L +K +A + E + K + T+P+ DS
Sbjct: 416 VEMKDSGYKVSDPENLYLKQGIANLSAEVVSLKRLIATQPISASDS 461
>EF028070-1|ABK15691.1| 462|Homo sapiens nuclear factor interleukin
3 regulated protein.
Length = 462
Score = 30.3 bits (65), Expect = 8.1
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +1
Query: 574 LKMKDSLASIS-PEPLEVKDPLATVIPEQLEEKESVTTEPLEVKDS 708
++MKDS +S PE L +K +A + E + K + T+P+ DS
Sbjct: 416 VEMKDSGYKVSDPENLYLKQGIANLSAEVVSLKRLIATQPISASDS 461
>CR542049-1|CAG46846.1| 462|Homo sapiens NFIL3 protein.
Length = 462
Score = 30.3 bits (65), Expect = 8.1
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +1
Query: 574 LKMKDSLASIS-PEPLEVKDPLATVIPEQLEEKESVTTEPLEVKDS 708
++MKDS +S PE L +K +A + E + K + T+P+ DS
Sbjct: 416 VEMKDSGYKVSDPENLYLKQGIANLSAEVVSLKRLIATQPISASDS 461
>BC126155-1|AAI26156.1| 945|Homo sapiens FLJ23861 protein protein.
Length = 945
Score = 30.3 bits (65), Expect = 8.1
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 6/65 (9%)
Frame = +1
Query: 58 LHCLQKKHCFLLNVF----YLKSLLYRRNL-HYQPRMLL-LKRNLPFKQTIHFPQSMTTQ 219
LHC+ K+ L +L+ LL + + HY +M L +K LP +T H P ++
Sbjct: 225 LHCVSKQKILLSQARRTQKHLQMLLAKHVVKHYGQQMKLSMKHQLPKMKTFHEPTTILGN 284
Query: 220 YLPPC 234
LP C
Sbjct: 285 SLPKC 289
>BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 30.3 bits (65), Expect = 8.1
Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 3/67 (4%)
Frame = +2
Query: 311 SNSPLPAEVPLPRESPIPAESHIPVDDLITSIETPLESTIQEVA---SVDDQPEVEREKS 481
S+SP + P P PI S P I +P +++ V+ SV PE +K
Sbjct: 705 SSSPQRRQSPSPSTRPIRRVSRTPEPKKIKKAASPSPQSVRRVSSSRSVSGSPEPAAKKP 764
Query: 482 DVPLEPV 502
P PV
Sbjct: 765 PAPPSPV 771
>BC032837-1|AAH32837.1| 705|Homo sapiens FLJ23861 protein protein.
Length = 705
Score = 30.3 bits (65), Expect = 8.1
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 6/65 (9%)
Frame = +1
Query: 58 LHCLQKKHCFLLNVF----YLKSLLYRRNL-HYQPRMLL-LKRNLPFKQTIHFPQSMTTQ 219
LHC+ K+ L +L+ LL + + HY +M L +K LP +T H P ++
Sbjct: 225 LHCVSKQKILLSQARRTQKHLQMLLAKHVVKHYGQQMKLSMKHQLPKMKTFHEPTTILGN 284
Query: 220 YLPPC 234
LP C
Sbjct: 285 SLPKC 289
>BC008197-1|AAH08197.1| 462|Homo sapiens nuclear factor,
interleukin 3 regulated protein.
Length = 462
Score = 30.3 bits (65), Expect = 8.1
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +1
Query: 574 LKMKDSLASIS-PEPLEVKDPLATVIPEQLEEKESVTTEPLEVKDS 708
++MKDS +S PE L +K +A + E + K + T+P+ DS
Sbjct: 416 VEMKDSGYKVSDPENLYLKQGIANLSAEVVSLKRLIATQPISASDS 461
>AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 30.3 bits (65), Expect = 8.1
Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 3/67 (4%)
Frame = +2
Query: 311 SNSPLPAEVPLPRESPIPAESHIPVDDLITSIETPLESTIQEVA---SVDDQPEVEREKS 481
S+SP + P P PI S P I +P +++ V+ SV PE +K
Sbjct: 705 SSSPQRRQSPSPSTRPIRRVSRTPEPKKIKKAASPSPQSVRRVSSSRSVSGSPEPAAKKP 764
Query: 482 DVPLEPV 502
P PV
Sbjct: 765 PAPPSPV 771
>AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 30.3 bits (65), Expect = 8.1
Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 3/67 (4%)
Frame = +2
Query: 311 SNSPLPAEVPLPRESPIPAESHIPVDDLITSIETPLESTIQEVA---SVDDQPEVEREKS 481
S+SP + P P PI S P I +P +++ V+ SV PE +K
Sbjct: 714 SSSPQRRQSPSPSTRPIRRVSRTPEPKKIKKAASPSPQSVRRVSSSRSVSGSPEPAAKKP 773
Query: 482 DVPLEPV 502
P PV
Sbjct: 774 PAPPSPV 780
>AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 30.3 bits (65), Expect = 8.1
Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 3/67 (4%)
Frame = +2
Query: 311 SNSPLPAEVPLPRESPIPAESHIPVDDLITSIETPLESTIQEVA---SVDDQPEVEREKS 481
S+SP + P P PI S P I +P +++ V+ SV PE +K
Sbjct: 705 SSSPQRRQSPSPSTRPIRRVSRTPEPKKIKKAASPSPQSVRRVSSSRSVSGSPEPAAKKP 764
Query: 482 DVPLEPV 502
P PV
Sbjct: 765 PAPPSPV 771
>AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 30.3 bits (65), Expect = 8.1
Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 3/67 (4%)
Frame = +2
Query: 311 SNSPLPAEVPLPRESPIPAESHIPVDDLITSIETPLESTIQEVA---SVDDQPEVEREKS 481
S+SP + P P PI S P I +P +++ V+ SV PE +K
Sbjct: 714 SSSPQRRQSPSPSTRPIRRVSRTPEPKKIKKAASPSPQSVRRVSSSRSVSGSPEPAAKKP 773
Query: 482 DVPLEPV 502
P PV
Sbjct: 774 PAPPSPV 780
>AL353764-1|CAH73854.1| 462|Homo sapiens nuclear factor,
interleukin 3 regulated protein.
Length = 462
Score = 30.3 bits (65), Expect = 8.1
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Frame = +1
Query: 574 LKMKDSLASIS-PEPLEVKDPLATVIPEQLEEKESVTTEPLEVKDS 708
++MKDS +S PE L +K +A + E + K + T+P+ DS
Sbjct: 416 VEMKDSGYKVSDPENLYLKQGIANLSAEVVSLKRLIATQPISASDS 461
>AK056911-1|BAB71308.1| 705|Homo sapiens protein ( Homo sapiens
cDNA FLJ32349 fis, clone PROST2007237. ).
Length = 705
Score = 30.3 bits (65), Expect = 8.1
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 6/65 (9%)
Frame = +1
Query: 58 LHCLQKKHCFLLNVF----YLKSLLYRRNL-HYQPRMLL-LKRNLPFKQTIHFPQSMTTQ 219
LHC+ K+ L +L+ LL + + HY +M L +K LP +T H P ++
Sbjct: 225 LHCVSKQKILLSQARRTQKHLQMLLAKHVVKHYGQQMKLSMKHQLPKMKTFHEPTTILGN 284
Query: 220 YLPPC 234
LP C
Sbjct: 285 SLPKC 289
>AF536542-1|AAN77183.1| 916|Homo sapiens SR-related CTD associated
factor 6 protein.
Length = 916
Score = 30.3 bits (65), Expect = 8.1
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 606 SRTARSEGSFGDCNSRTARRKGVCNYGASRSEGLSS 713
SR+++S GS+ SR+ R C+ SRS SS
Sbjct: 755 SRSSKSSGSYSRSRSRSCSRSSSCSRSRSRSRSRSS 790
>AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 30.3 bits (65), Expect = 8.1
Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 3/67 (4%)
Frame = +2
Query: 311 SNSPLPAEVPLPRESPIPAESHIPVDDLITSIETPLESTIQEVA---SVDDQPEVEREKS 481
S+SP + P P PI S P I +P +++ V+ SV PE +K
Sbjct: 703 SSSPQRRQSPSPSTRPIRRVSRTPEPKKIKKAASPSPQSVRRVSSSRSVSGSPEPAAKKP 762
Query: 482 DVPLEPV 502
P PV
Sbjct: 763 PAPPSPV 769
>AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 30.3 bits (65), Expect = 8.1
Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 3/67 (4%)
Frame = +2
Query: 311 SNSPLPAEVPLPRESPIPAESHIPVDDLITSIETPLESTIQEVA---SVDDQPEVEREKS 481
S+SP + P P PI S P I +P +++ V+ SV PE +K
Sbjct: 703 SSSPQRRQSPSPSTRPIRRVSRTPEPKKIKKAASPSPQSVRRVSSSRSVSGSPEPAAKKP 762
Query: 482 DVPLEPV 502
P PV
Sbjct: 763 PAPPSPV 769
>AC006994-1|AAY14880.1| 585|Homo sapiens unknown protein.
Length = 585
Score = 30.3 bits (65), Expect = 8.1
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 6/65 (9%)
Frame = +1
Query: 58 LHCLQKKHCFLLNVF----YLKSLLYRRNL-HYQPRMLL-LKRNLPFKQTIHFPQSMTTQ 219
LHC+ K+ L +L+ LL + + HY +M L +K LP +T H P ++
Sbjct: 225 LHCVSKQKILLSQARRTQKHLQMLLAKHVVKHYGQQMKLSMKHQLPKMKTFHEPTTILGN 284
Query: 220 YLPPC 234
LP C
Sbjct: 285 SLPKC 289
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,910,115
Number of Sequences: 237096
Number of extensions: 2071295
Number of successful extensions: 8394
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 6846
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8271
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9423020542
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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