Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20280
(778 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g16880.2 68418.m01979 VHS domain-containing protein / GAT dom... 33 0.21
At5g16880.1 68418.m01978 VHS domain-containing protein / GAT dom... 33 0.21
At5g09530.1 68418.m01103 hydroxyproline-rich glycoprotein family... 32 0.49
At2g38410.1 68415.m04718 VHS domain-containing protein / GAT dom... 31 0.64
At5g58910.1 68418.m07380 laccase, putative / diphenol oxidase, p... 31 0.85
At5g16880.3 68418.m01977 VHS domain-containing protein / GAT dom... 31 1.1
At4g28180.1 68417.m04040 expressed protein 30 1.5
At3g10660.1 68416.m01282 calcium-dependent protein kinase isofor... 30 1.5
At3g07740.2 68416.m00935 transcriptional adaptor (ADA2a) identic... 30 2.0
At3g07740.1 68416.m00936 transcriptional adaptor (ADA2a) identic... 30 2.0
At1g72150.1 68414.m08342 SEC14 cytosolic factor family protein /... 30 2.0
At3g60900.1 68416.m06813 fasciclin-like arabinogalactan-protein ... 29 2.6
At3g24715.1 68416.m03103 octicosapeptide/Phox/Bem1p (PB1) domain... 29 2.6
At3g12720.1 68416.m01589 myb family transcription factor contain... 29 2.6
At5g07340.1 68418.m00838 calnexin, putative identical to calnexi... 29 3.4
At3g61260.1 68416.m06856 DNA-binding family protein / remorin fa... 29 4.5
At3g19990.1 68416.m02529 expressed protein 29 4.5
At2g46810.1 68415.m05841 basic helix-loop-helix (bHLH) family pr... 29 4.5
At5g52680.1 68418.m06540 heavy-metal-associated domain-containin... 28 6.0
At5g49960.1 68418.m06186 expressed protein ; expression supporte... 28 6.0
At5g01860.1 68418.m00105 zinc finger (C2H2 type) family protein ... 28 6.0
At1g69710.1 68414.m08022 zinc finger protein, putative / regulat... 28 6.0
At1g47340.1 68414.m05241 F-box family protein contains F-box dom... 28 6.0
At5g16610.2 68418.m01945 expressed protein 28 7.9
At5g16610.1 68418.m01944 expressed protein 28 7.9
At3g18480.1 68416.m02348 CCAAT displacement protein-related / CD... 28 7.9
At2g37370.1 68415.m04583 hypothetical protein 28 7.9
At1g53345.1 68414.m06047 expressed protein 28 7.9
>At5g16880.2 68418.m01979 VHS domain-containing protein / GAT
domain-containing protein weak similarity to hepatocyte
growth factor-regulated tyrosine kinase substrate [Homo
sapiens] GI:2731383; contains Pfam profiles PF00790: VHS
domain, PF03127: GAT domain
Length = 407
Score = 33.1 bits (72), Expect = 0.21
Identities = 17/86 (19%), Positives = 37/86 (43%)
Frame = +1
Query: 505 YEVVEPMESTEPENSLMSVSAEPLKMKDSLASISPEPLEVKDPLATVIPEQLEEKESVTT 684
Y+V + E ++ +++ ++ S SP+ ++D L T + +Q + ++
Sbjct: 221 YDVPVRSFTAEQTKEAFDIARNSIELLSTVLSSSPQHDALQDDLTTTLVQQCRQSQTTVQ 280
Query: 685 EPLEVKDSQASVTAEPLEVKDPLAST 762
+E ++ E L V D L T
Sbjct: 281 RIIETAGENEALLFEALNVNDELVKT 306
>At5g16880.1 68418.m01978 VHS domain-containing protein / GAT
domain-containing protein weak similarity to hepatocyte
growth factor-regulated tyrosine kinase substrate [Homo
sapiens] GI:2731383; contains Pfam profiles PF00790: VHS
domain, PF03127: GAT domain
Length = 407
Score = 33.1 bits (72), Expect = 0.21
Identities = 17/86 (19%), Positives = 37/86 (43%)
Frame = +1
Query: 505 YEVVEPMESTEPENSLMSVSAEPLKMKDSLASISPEPLEVKDPLATVIPEQLEEKESVTT 684
Y+V + E ++ +++ ++ S SP+ ++D L T + +Q + ++
Sbjct: 221 YDVPVRSFTAEQTKEAFDIARNSIELLSTVLSSSPQHDALQDDLTTTLVQQCRQSQTTVQ 280
Query: 685 EPLEVKDSQASVTAEPLEVKDPLAST 762
+E ++ E L V D L T
Sbjct: 281 RIIETAGENEALLFEALNVNDELVKT 306
>At5g09530.1 68418.m01103 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 370
Score = 31.9 bits (69), Expect = 0.49
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = -1
Query: 733 EVPQLQTLESPSLREAP*LQTPFLRAVLELQSPKDPSLLAVLDLWTPENP 584
+VP++ E P L E P L+ P + + + + PK P L + ++ PE P
Sbjct: 190 KVPEIPKPELPKLPEVPKLEAPKVPEIQKPELPKMPELPKMPEIQKPELP 239
Score = 29.5 bits (63), Expect = 2.6
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Frame = -1
Query: 733 EVPQLQTL---ESPSLREAP*LQTPFLRAVLELQSPKDPSLLAVLDLWTPENPSF*AVQQ 563
E+P++ + E P L E P L+ P + + + + PK P L + ++ PE P +Q+
Sbjct: 226 ELPKMPEIQKPELPKLPEVPKLEAPKVPEIQKPELPKMPELPKMPEIQKPELPKMPEIQK 285
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = -1
Query: 733 EVPQLQTLESPSLREAP*LQTPFLRAVLELQSPKDPSLLAVLDLWTPENP 584
EVP+L+ + P +++ + P L + E+Q P+ P L V L P+ P
Sbjct: 204 EVPKLEAPKVPEIQKPELPKMPELPKMPEIQKPELPKLPEVPKLEAPKVP 253
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = -1
Query: 733 EVPQLQTLESPSLREAP*LQTPFLRAVLELQSPKDPSLLAVLDLWTPENPSF 578
E+P+ + P L + P + P L V E+Q P+ P + ++ PE P F
Sbjct: 110 ELPKFPEIPKPELPKMPEIPKPELPKVPEIQKPELPKM---PEIPKPELPKF 158
>At2g38410.1 68415.m04718 VHS domain-containing protein / GAT
domain-containing protein weak similarity to hepatocyte
growth factor-regulated tyrosine kinase substrate HRS
isoform 2 [Homo sapiens] GI:9022389; contains Pfam
profiles PF00790: VHS domain, PF03127: GAT domain
Length = 671
Score = 31.5 bits (68), Expect = 0.64
Identities = 23/87 (26%), Positives = 38/87 (43%), Gaps = 2/87 (2%)
Frame = +1
Query: 520 PMESTEPENSLMSVSAEPLKMKDSLAS--ISPEPLEVKDPLATVIPEQLEEKESVTTEPL 693
P S ++S ++ S+ P+ S I E E +D A + + SVTT+P
Sbjct: 342 PKSSEAKDSSSIAGSSSPIPATVSTGKSPIDEEYEEEEDEFAQLARRHSKPPASVTTDPT 401
Query: 694 EVKDSQASVTAEPLEVKDPLASTNYSK 774
++ A+ A L + DP N +K
Sbjct: 402 SLESHNAASNALALALPDPPPPVNTTK 428
>At5g58910.1 68418.m07380 laccase, putative / diphenol oxidase,
putative similar to diphenol oxidase [Nicotiana
tabacum][GI:1685087]
Length = 523
Score = 31.1 bits (67), Expect = 0.85
Identities = 17/41 (41%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Frame = -3
Query: 575 SGSAETDINEFSGSVDSIGSTTSYG-PVRGGRRIFLALLRA 456
S S IN SGS+ + S +SYG PVR G+ L ++ A
Sbjct: 146 SASDAHTINGHSGSISNCPSQSSYGLPVRAGKTYMLRIINA 186
>At5g16880.3 68418.m01977 VHS domain-containing protein / GAT
domain-containing protein weak similarity to hepatocyte
growth factor-regulated tyrosine kinase substrate [Homo
sapiens] GI:2731383; contains Pfam profiles PF00790: VHS
domain, PF03127: GAT domain
Length = 297
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/74 (20%), Positives = 33/74 (44%)
Frame = +1
Query: 505 YEVVEPMESTEPENSLMSVSAEPLKMKDSLASISPEPLEVKDPLATVIPEQLEEKESVTT 684
Y+V + E ++ +++ ++ S SP+ ++D L T + +Q + ++
Sbjct: 221 YDVPVRSFTAEQTKEAFDIARNSIELLSTVLSSSPQHDALQDDLTTTLVQQCRQSQTTVQ 280
Query: 685 EPLEVKDSQASVTA 726
+E D Q TA
Sbjct: 281 RIIETADEQTLCTA 294
>At4g28180.1 68417.m04040 expressed protein
Length = 256
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +2
Query: 356 PIPAESHIPVDDLITSIETPLESTIQEVASVD-DQPEVEREKSDV 487
PIP +PV DL+ S T +S Q + PE+ KSD+
Sbjct: 42 PIPISVPVPVPDLVPSAPTVSDSEAQVPLPLSPPAPEISHSKSDI 86
>At3g10660.1 68416.m01282 calcium-dependent protein kinase isoform 2
(CPK2) identical to calcium-dependent protein kinase
isoform 2 [Arabidopsis thaliana] gi|9837343|gb|AAG00535;
contains protein kinase domain, Pfam:PF00069; contains
EF hand domain (calcium-binding EF-hand), Pfam:PF00036,
INTERPRO:IPR002048
Length = 646
Score = 30.3 bits (65), Expect = 1.5
Identities = 25/89 (28%), Positives = 37/89 (41%), Gaps = 6/89 (6%)
Frame = +1
Query: 496 TGPYEVVEPMESTEPENSLMSVSAEPLKMK----DSLASISPEPL--EVKDPLATVIPEQ 657
T P ++P +PE V AE K K +S + PE EV + PE
Sbjct: 71 TNPETKLKPDLEIQPEEKKEKVLAEETKQKVVPEESKQEVPPEESKREVVVQPESAKPET 130
Query: 658 LEEKESVTTEPLEVKDSQASVTAEPLEVK 744
E + TT+P +++ AEP + K
Sbjct: 131 KSESKPETTKPETTSETKPETKAEPQKPK 159
>At3g07740.2 68416.m00935 transcriptional adaptor (ADA2a) identical
to transcriptional adaptor ADA2a [Arabidopsis thaliana]
gi|13591698|gb|AAK31319
Length = 477
Score = 29.9 bits (64), Expect = 2.0
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Frame = +2
Query: 278 DESVKVTKDSRSNSPLPAEVPL-PRES-PIPAESHIPVDDLITSIETPLESTIQEVASVD 451
DE + ++KDS + +PA V L P+E P+ AE + I+ PL + +A V
Sbjct: 103 DELLAMSKDSAVKTEIPAFVRLSPKEELPVSAEIKHEASGKVNEIDPPLSA----LAGVK 158
Query: 452 DQPEVEREKSDVPLE 496
+ V + K + LE
Sbjct: 159 KKGNVPQAKDIIKLE 173
>At3g07740.1 68416.m00936 transcriptional adaptor (ADA2a) identical
to transcriptional adaptor ADA2a [Arabidopsis thaliana]
gi|13591698|gb|AAK31319
Length = 548
Score = 29.9 bits (64), Expect = 2.0
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Frame = +2
Query: 278 DESVKVTKDSRSNSPLPAEVPL-PRES-PIPAESHIPVDDLITSIETPLESTIQEVASVD 451
DE + ++KDS + +PA V L P+E P+ AE + I+ PL + +A V
Sbjct: 174 DELLAMSKDSAVKTEIPAFVRLSPKEELPVSAEIKHEASGKVNEIDPPLSA----LAGVK 229
Query: 452 DQPEVEREKSDVPLE 496
+ V + K + LE
Sbjct: 230 KKGNVPQAKDIIKLE 244
>At1g72150.1 68414.m08342 SEC14 cytosolic factor family protein /
phosphoglyceride transfer family protein similar to
SEC14-like protein 2 (Alpha-tocopherol associated
protein) (TAP) (bTAP) (Fragment) (SP:P58875) {Bos
taurus}; similar to GI:807956 from [Saccharomyces
cerevisiae]; contains Pfam PF00650 : CRAL/TRIO domain;
contains Pfam PF03765 : CRAL/TRIO, N-terminus
Length = 573
Score = 29.9 bits (64), Expect = 2.0
Identities = 19/77 (24%), Positives = 32/77 (41%)
Frame = +1
Query: 508 EVVEPMESTEPENSLMSVSAEPLKMKDSLASISPEPLEVKDPLATVIPEQLEEKESVTTE 687
E + E TE + + + + K ++ + E P+ T E+ EEK VTTE
Sbjct: 132 EETKEEEKTEEKKEETTTEVKVEEEKPAVPAAEEEKSSEAAPVETKSEEKPEEKAEVTTE 191
Query: 688 PLEVKDSQASVTAEPLE 738
+ + T E +E
Sbjct: 192 KASSAEEDGTKTVEAIE 208
>At3g60900.1 68416.m06813 fasciclin-like arabinogalactan-protein
(FLA10)
Length = 422
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +2
Query: 308 RSNSPLPAEVPLPRESPIPAESHIPVDDLITSIETPLESTIQE 436
+S+SP PA P+ +P PA+S PV+ + +P + E
Sbjct: 335 KSSSPAPAPEPVSAPTPTPAKSPSPVEAPSPTAASPPAPPVDE 377
>At3g24715.1 68416.m03103 octicosapeptide/Phox/Bem1p (PB1)
domain-containing protein contains Pfam profile
PF00564: PB1 domain
Length = 756
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = -3
Query: 551 NEFSGSVDSIGSTTSYGPVRGGRRIFLALLRADHQQKPLPGL 426
++F G+ S S S+ P + IF + HQQ+PLP +
Sbjct: 383 SQFHGNNSSSESNNSFTPAQQDTSIFEVIDSKYHQQRPLPSV 424
>At3g12720.1 68416.m01589 myb family transcription factor contains
PFAM profile: PF00249 myb-like DNA binding domain
Length = 307
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/64 (25%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Frame = +2
Query: 275 LDESVKVTKDSRSNSPL---PAEVPLPRESPIPAESHIPVDDLITSIETPLESTIQEVAS 445
LD+S + N P P ++ P ++ IP+++ IP++D ++S +T + +
Sbjct: 169 LDQSTTAFSITNINPPTSTKPNKLKSPNQTTIPSQTVIPINDNMSSTQTMIPINDPMSSL 228
Query: 446 VDDQ 457
+DD+
Sbjct: 229 LDDE 232
>At5g07340.1 68418.m00838 calnexin, putative identical to calnexin
homolog 2 from Arabidopsis thaliana [SP|Q38798], strong
similarity to calnexin homolog 1, Arabidopsis thaliana,
EMBL:AT08315 [SP|P29402]; contains Pfam profile PF00262
calreticulin family
Length = 532
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = +1
Query: 610 EPLEVKDPLATVIPEQLEEKESVTTEPLEVKDSQASVTAEPLEVKDPLAS 759
E ++ DP A V P+ +E + E E + + + EP+EV+DP AS
Sbjct: 238 ERAKIPDPNA-VKPDDWDEDAPMEIEDEEAEKPEGWLDDEPVEVEDPEAS 286
>At3g61260.1 68416.m06856 DNA-binding family protein / remorin
family protein similar to DNA-binding protein gi|601843
[Arabidopsis thaliana], remorin [Solanum tuberosum]
GI:1881585; contains Pfam profiles PF03763: Remorin
C-terminal region, PF03766: Remorin N-terminal region
Length = 212
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/46 (26%), Positives = 22/46 (47%)
Frame = +2
Query: 278 DESVKVTKDSRSNSPLPAEVPLPRESPIPAESHIPVDDLITSIETP 415
+ KVT + +++P PA +P +P P + + D I+ P
Sbjct: 12 ESPAKVTTPAPADTPAPAPAEIPAPAPAPTPADVTKDVAEEKIQNP 57
>At3g19990.1 68416.m02529 expressed protein
Length = 425
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/21 (66%), Positives = 15/21 (71%)
Frame = -1
Query: 670 PFLRAVLELQSPKDPSLLAVL 608
PFLR LE PK PSL+AVL
Sbjct: 19 PFLRGELEKIDPKLPSLIAVL 39
>At2g46810.1 68415.m05841 basic helix-loop-helix (bHLH) family
protein contains Pfam profile: PF00010 helix-loop-helix
DNA-binding domain
Length = 371
Score = 28.7 bits (61), Expect = 4.5
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 6/51 (11%)
Frame = -1
Query: 718 QTLESPSLREAP*LQTPFLRAVLELQSP------KDPSLLAVLDLWTPENP 584
Q L +PSL + + PFL+ + + + P KDPS LA+L L T E P
Sbjct: 55 QQLSTPSLLQDTTI--PFLQMLQQSEDPSPFLSFKDPSFLALLSLQTLEKP 103
>At5g52680.1 68418.m06540 heavy-metal-associated domain-containing
protein low similarity to pneumococcal surface protein A
PspA [Streptococcus pneumoniae] GI:7800654; contains
Pfam profile PF00403: Heavy-metal-associated domain
Length = 238
Score = 28.3 bits (60), Expect = 6.0
Identities = 11/28 (39%), Positives = 14/28 (50%)
Frame = +2
Query: 299 KDSRSNSPLPAEVPLPRESPIPAESHIP 382
K SR +P+P P P P PA +P
Sbjct: 179 KTSRVPAPVPVRAPAPTPKPAPAPPSVP 206
>At5g49960.1 68418.m06186 expressed protein ; expression supported
by MPSS
Length = 824
Score = 28.3 bits (60), Expect = 6.0
Identities = 18/50 (36%), Positives = 23/50 (46%)
Frame = +2
Query: 278 DESVKVTKDSRSNSPLPAEVPLPRESPIPAESHIPVDDLITSIETPLEST 427
D+ V+ D +S LP VP P E P+P S P IT + T T
Sbjct: 37 DDGDTVSYDGDDSSNLPT-VPNPEEKPVPVPSQSP-SQRITRLWTQFSLT 84
>At5g01860.1 68418.m00105 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 215
Score = 28.3 bits (60), Expect = 6.0
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Frame = +2
Query: 362 PAESHIPV---DDLITSIETPLESTIQEVASVDDQPEVEREK-SDVPL 493
P SH+ V DDL ++ + LE +I + A DQPE + K SD+ L
Sbjct: 164 PPMSHLSVPKTDDLSINLISNLEGSIHDQAVKKDQPEADPCKDSDIDL 211
>At1g69710.1 68414.m08022 zinc finger protein, putative / regulator of
chromosome condensation (RCC1) family protein similar to
zinc finger protein [Arabidopsis thaliana]
gi|15811367|gb|AAL08940
Length = 1028
Score = 28.3 bits (60), Expect = 6.0
Identities = 22/69 (31%), Positives = 33/69 (47%)
Frame = +1
Query: 523 MESTEPENSLMSVSAEPLKMKDSLASISPEPLEVKDPLATVIPEQLEEKESVTTEPLEVK 702
++ST P S +AE ++KDS E + LA+ QLEE+ T L+V
Sbjct: 819 VKSTSPRRSYEVAAAESKQLKDSFNQDMAGLKEQVEQLASK-AHQLEEELEKTKRQLKVV 877
Query: 703 DSQASVTAE 729
+ A+ AE
Sbjct: 878 TAMAADEAE 886
>At1g47340.1 68414.m05241 F-box family protein contains F-box domain
Pfam:PF00646
Length = 459
Score = 28.3 bits (60), Expect = 6.0
Identities = 16/69 (23%), Positives = 29/69 (42%)
Frame = +1
Query: 7 ECLLSVLCQMSMMYQLSLHCLQKKHCFLLNVFYLKSLLYRRNLHYQPRMLLLKRNLPFKQ 186
E +L +L ++ HC+ K+ +L+ + + L R+ QPR+L
Sbjct: 40 ELILEILKRLPAKSVKRFHCVSKQWASMLSCPHFRELFLTRSSSAQPRLLFAIEKHNQWS 99
Query: 187 TIHFPQSMT 213
PQ +T
Sbjct: 100 LFSLPQRLT 108
>At5g16610.2 68418.m01945 expressed protein
Length = 673
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = +1
Query: 538 PENSLMSVSAEPLKMKDSLASISPEPLEVKDPLATVIPEQLEEKESVTTEPLEVK 702
P + V PL + ++ I ++V DPLA + E +EK VT++ + VK
Sbjct: 249 PRKRVKRVQRNPLPLNEN--EIQSTQVKV-DPLADCVMEDNDEKNPVTSKQIPVK 300
>At5g16610.1 68418.m01944 expressed protein
Length = 529
Score = 27.9 bits (59), Expect = 7.9
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = +1
Query: 538 PENSLMSVSAEPLKMKDSLASISPEPLEVKDPLATVIPEQLEEKESVTTEPLEVK 702
P + V PL + ++ I ++V DPLA + E +EK VT++ + VK
Sbjct: 105 PRKRVKRVQRNPLPLNEN--EIQSTQVKV-DPLADCVMEDNDEKNPVTSKQIPVK 156
>At3g18480.1 68416.m02348 CCAAT displacement protein-related /
CDP-related similar to CCAAT displacement protein (CDP)
(Cut-like 1) (Swiss-Prot:P39880) [Homo sapiens];
contains Pfam:PF00904 Involucrin repeat
Length = 689
Score = 27.9 bits (59), Expect = 7.9
Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 4/70 (5%)
Frame = +1
Query: 505 YEVVEPMES----TEPENSLMSVSAEPLKMKDSLASISPEPLEVKDPLATVIPEQLEEKE 672
YE +P + E + L V +E KMK L E +K+ AT+ +LEE+
Sbjct: 118 YEAPDPFPALASIAEQDRKLSEVESENRKMKVELEEFRTEATHLKNQQATI--RRLEERN 175
Query: 673 SVTTEPLEVK 702
+ +E K
Sbjct: 176 RQLEQQMEEK 185
>At2g37370.1 68415.m04583 hypothetical protein
Length = 697
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = +2
Query: 350 ESPIPAESHIPVDDLITSIETPLESTIQEVASVDDQPEVEREKSDVPLEP 499
ESP S L + ETPL T+ +++ DD P+ ++ S +P
Sbjct: 609 ESPSRTSSSSRSPSLKMTHETPLSDTVLKLSGGDDSPDSKKGSSGKEEDP 658
>At1g53345.1 68414.m06047 expressed protein
Length = 325
Score = 27.9 bits (59), Expect = 7.9
Identities = 19/54 (35%), Positives = 27/54 (50%)
Frame = -3
Query: 530 DSIGSTTSYGPVRGGRRIFLALLRADHQQKPLPGL*TLKAFQLKLLDHRLEYDF 369
+S GS + RR+F + AD + LP KAF +LD ++EYDF
Sbjct: 131 ESRGSCKEMNDFKRMRRVFEYIEDADIWKWELP---ESKAFNSGILDLKIEYDF 181
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,531,106
Number of Sequences: 28952
Number of extensions: 285233
Number of successful extensions: 1308
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1135
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1286
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1736283200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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