Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20279
(772 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr 2||... 183 3e-47
SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex s... 107 2e-24
SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces pomb... 102 5e-23
SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyce... 79 5e-16
SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces pombe... 53 5e-08
SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit Arp9|Schizosa... 50 4e-07
SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit Arp42|Sc... 49 8e-07
SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomy... 48 1e-06
SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces po... 43 6e-05
SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces pomb... 34 0.026
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 33 0.060
SPBC947.01 |||AAA family ATPase, unknown biological role|Schizos... 32 0.10
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 31 0.14
SPCC18.03 |||shuttle craft like transcriptional regulator|Schizo... 29 0.56
SPAC7D4.14c |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 29 0.74
SPAC3C7.12 |tip1|noc1|CLIP170 family protein Tip1|Schizosaccharo... 29 0.74
SPBC30B4.04c |sol1||SWI/SNF complex subunit Sol1|Schizosaccharom... 28 1.3
SPAC6G10.10c |||human hmmtag2 homolog|Schizosaccharomyces pombe|... 28 1.3
SPBC4C3.12 |sep1||fork head transcription factor Sep1|Schizosacc... 28 1.7
SPCC757.09c |rnc1||RNA-binding protein that suppresses calcineur... 27 3.0
SPBC530.13 |||cyclin Ctk2|Schizosaccharomyces pombe|chr 2|||Manual 27 3.0
SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces... 27 3.0
SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyce... 27 3.9
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 27 3.9
SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch... 27 3.9
SPBC1271.02 |stt3||oligosaccharyltransferase subunit Stt3|Schizo... 26 5.2
SPAC20G8.05c |cdc15||cell division control protein Cdc15|Schizos... 26 5.2
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 26 5.2
SPAC3H8.08c |||transcription factor|Schizosaccharomyces pombe|ch... 26 6.9
SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase Tor2|S... 26 6.9
SPBC1683.13c |||transcription factor |Schizosaccharomyces pombe|... 26 6.9
SPAC23C4.10 |sec2||guanyl-nucleotide exchange factor Sec2 |Schiz... 25 9.1
SPAC17H9.01 |cid16||poly|Schizosaccharomyces pombe|chr 1|||Manual 25 9.1
SPCC1020.01c |pma2|SPCC1393.01|P-type proton ATPase Pma2 |Schizo... 25 9.1
SPCC364.02c |bis1||stress response protein Bis1|Schizosaccharomy... 25 9.1
SPBC530.14c |dsk1||SR protein-specific kinase Dsk1|Schizosacchar... 25 9.1
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 25 9.1
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 25 9.1
SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2 |Schizosa... 25 9.1
SPAC2F3.15 |lsk1||latrunculin sensitive kinase Lsk1 |Schizosacch... 25 9.1
SPCC1322.03 |||TRP-like ion channel|Schizosaccharomyces pombe|ch... 25 9.1
SPAC17A2.13c |rad25||14-3-3 protein Rad25|Schizosaccharomyces po... 25 9.1
>SPBC32H8.12c |act1|cps8|actin |Schizosaccharomyces pombe|chr
2|||Manual
Length = 375
Score = 183 bits (445), Expect = 3e-47
Identities = 101/178 (56%), Positives = 116/178 (65%), Gaps = 3/178 (1%)
Frame = +3
Query: 237 PQGQQRKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYAL 416
P+ + KMTQI+FETFN PA YVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYAL
Sbjct: 112 PKSNREKMTQIIFETFNAPAFYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYAL 171
Query: 417 PHAILRLDLAGRDLTDYLMKILTERGYSFTTPPSGKSFVTSRRSCATSLLTSSRKWPPLH 596
PHAI+RLDLAGRDLTDYLMKIL ERGY+F+T + + L ++ L
Sbjct: 172 PHAIMRLDLAGRDLTDYLMKILMERGYTFSTTAEREIVRDIKEKLCYVALDFEQE---LQ 228
Query: 597 PAAPSRSLT---NFPTVRSSLSETKDSVAQRLSSNPRSWVWKLCGIHETTYNSIMKCD 761
AA S SL P + + A P + + GIHE TYNSIMKCD
Sbjct: 229 TAAQSSSLEKSYELPDGQVITIGNERFRAPEALFQPSALGLENAGIHEATYNSIMKCD 286
Score = 177 bits (432), Expect = 1e-45
Identities = 77/83 (92%), Positives = 80/83 (96%)
Frame = +1
Query: 10 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 189
GRPRH G+MVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIV NWDDMEKIWHHTFYNELR
Sbjct: 36 GRPRHHGIMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELR 95
Query: 190 VAPEEHPVLLTEAPLNPKANRER 258
VAPEEHP LLTEAPLNPK+NRE+
Sbjct: 96 VAPEEHPCLLTEAPLNPKSNREK 118
Score = 129 bits (312), Expect = 4e-31
Identities = 62/68 (91%), Positives = 64/68 (94%)
Frame = +2
Query: 509 TAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALF 688
TAEREIVRDIKEKLCYVALDFEQE+ TAA SSSLEKSYELPDGQVITIGNERFR PEALF
Sbjct: 203 TAEREIVRDIKEKLCYVALDFEQELQTAAQSSSLEKSYELPDGQVITIGNERFRAPEALF 262
Query: 689 QPSFLGME 712
QPS LG+E
Sbjct: 263 QPSALGLE 270
>SPAC11H11.06 |arp2|SPAC22F8.01|ARP2/3 actin-organizing complex
subunit Arp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 390
Score = 107 bits (257), Expect = 2e-24
Identities = 48/89 (53%), Positives = 64/89 (71%)
Frame = +3
Query: 237 PQGQQRKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYAL 416
P + KM + MFE + +YVAIQAVLSLYA G ++G+V+DSGDGV+H VP+YE L
Sbjct: 112 PVANREKMCETMFERYGFGGVYVAIQAVLSLYAQGLSSGVVVDSGDGVTHIVPVYESVVL 171
Query: 417 PHAILRLDLAGRDLTDYLMKILTERGYSF 503
H + RLD+AGRD T YL+ +L +GY+F
Sbjct: 172 NHLVGRLDVAGRDATRYLISLLLRKGYAF 200
Score = 83.4 bits (197), Expect = 3e-17
Identities = 32/69 (46%), Positives = 53/69 (76%)
Frame = +1
Query: 52 KDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAP 231
KD VGDEA++ R +L +KYP+E+GI+ ++++M ++W +TF+ +L++ P +LLTE P
Sbjct: 50 KDVMVGDEAEAVRSLLQVKYPMENGIIRDFEEMNQLWDYTFFEKLKIDPRGRKILLTEPP 109
Query: 232 LNPKANRER 258
+NP ANRE+
Sbjct: 110 MNPVANREK 118
Score = 79.8 bits (188), Expect = 4e-16
Identities = 34/68 (50%), Positives = 49/68 (72%)
Frame = +2
Query: 509 TAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALF 688
TA+ E VR++KEKLCYV+ D E + + ++ L ++Y LPDG+VI +G+ER+ CPE LF
Sbjct: 203 TADFETVREMKEKLCYVSYDLELDHKLSEETTVLMRNYTLPDGRVIKVGSERYECPECLF 262
Query: 689 QPSFLGME 712
QP +G E
Sbjct: 263 QPHLVGSE 270
>SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 379
Score = 102 bits (245), Expect = 5e-23
Identities = 56/174 (32%), Positives = 92/174 (52%), Gaps = 3/174 (1%)
Frame = +3
Query: 249 QRKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAI 428
+ K+ + +ET N PA+ ++Q VL+LYAS RTTGIVL+ GDG++H+VPIY+G+++P AI
Sbjct: 121 KEKIAEYFYETLNVPALSFSLQPVLALYASARTTGIVLECGDGLTHSVPIYDGFSIPSAI 180
Query: 429 LRLDLAGRDLTDYLMKILTERGYSFTTPPSGKSFVTSRRSC---ATSLLTSSRKWPPLHP 599
+ ++ GRD+TDYL L + G+ + + + C A+ + W P
Sbjct: 181 QQEEIGGRDVTDYLQLQLRKSGHELVSSAEKEIVREIKEKCCYVASDFRSEIESWTEHKP 240
Query: 600 AAPSRSLTNFPTVRSSLSETKDSVAQRLSSNPRSWVWKLCGIHETTYNSIMKCD 761
+ L + T+ T+ A + NP + G+H + SI+ D
Sbjct: 241 QIHTYQLPDNQTITLG---TECFSAPEVLFNPEMMGSEASGLHIQLFKSILLSD 291
Score = 92.3 bits (219), Expect = 7e-20
Identities = 42/84 (50%), Positives = 58/84 (69%), Gaps = 1/84 (1%)
Frame = +1
Query: 10 GRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYN-EL 186
GR +H+ VM QKD +VG EAQ+ RG+L ++ PIE GI+ NW DME+IW + + + +L
Sbjct: 40 GRIKHERVMPSSIQKDMFVGSEAQNLRGLLKIQRPIERGIIQNWSDMEEIWSYIYSDQQL 99
Query: 187 RVAPEEHPVLLTEAPLNPKANRER 258
PEEHP+LLTE PL N+E+
Sbjct: 100 NTLPEEHPLLLTEPPLANIRNKEK 123
>SPAC630.03 |arp3|act2|actin-like protein Arp3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 427
Score = 79.4 bits (187), Expect = 5e-16
Identities = 39/93 (41%), Positives = 59/93 (63%), Gaps = 8/93 (8%)
Frame = +3
Query: 237 PQGQQRKMTQIMFETFNTPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTV 392
P + +IMFE+FN +Y+A+QAVL+L AS + TG V+DSGDGV+H +
Sbjct: 135 PPENRENTAEIMFESFNCAGLYIAVQAVLALAASWTSSKVTDRSLTGTVVDSGDGVTHII 194
Query: 393 PIYEGYALPHAILRLDLAGRDLTDYLMKILTER 491
P+ EGY + +I + LAGRD+T ++ +L +R
Sbjct: 195 PVAEGYVIGSSIKTMPLAGRDVTYFVQSLLRDR 227
Score = 74.1 bits (174), Expect = 2e-14
Identities = 32/68 (47%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Frame = +1
Query: 55 DSYVGDEAQSKRGI-LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAP 231
D ++G++A K +L YPI HG + NWD ME+ W + + LR PE+H LLTE P
Sbjct: 73 DFFIGNDALKKASAGYSLDYPIRHGQIENWDHMERFWQQSLFKYLRCEPEDHYFLLTEPP 132
Query: 232 LNPKANRE 255
LNP NRE
Sbjct: 133 LNPPENRE 140
Score = 30.3 bits (65), Expect = 0.32
Identities = 22/65 (33%), Positives = 28/65 (43%), Gaps = 4/65 (6%)
Frame = +2
Query: 536 IKEKLCYVALDFEQEMATAASSSS--LEKSYELPDGQVITI--GNERFRCPEALFQPSFL 703
IKE+ CYV D +E + L+ + E G TI G ERF PE F P
Sbjct: 240 IKEECCYVCPDIVKEFSRFDREPDRYLKYASESITGHSTTIDVGFERFLAPEIFFNPEIA 299
Query: 704 GMEAL 718
+ L
Sbjct: 300 SSDFL 304
>SPBC365.10 |||actin-like protein Arp5 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 721
Score = 52.8 bits (121), Expect = 5e-08
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Frame = +3
Query: 258 MTQIMFETFNTPAMYVAIQAVLSLYASGR--TTGIVLDSGDGVSHTVPIYEGYALPHAIL 431
MT+++FE +N P++ I + S Y + + ++GIVL+ G+ SH +P+ G +
Sbjct: 134 MTELLFELYNAPSVAYGIDGLFSFYHNTKPSSSGIVLNLGNAASHVIPVLNGERILSEAK 193
Query: 432 RLDLAGRDLTDYLMKILTERGYSF 503
R+ G + YL+K+ + SF
Sbjct: 194 RISWGGSQSSSYLLKLFQIKYPSF 217
Score = 42.3 bits (95), Expect = 7e-05
Identities = 20/67 (29%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Frame = +1
Query: 43 MGQKDSYVGDEAQSKRGILTL-KYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLL 219
+ + + VG++ + G ++ + P E +++NWD ME++ +TF +L + EHP+ +
Sbjct: 62 LSRTSTLVGNDTLIEVGSRSIARSPFERNVISNWDLMEQVLDYTFL-KLGIDRMEHPICM 120
Query: 220 TEAPLNP 240
TE NP
Sbjct: 121 TEPLANP 127
>SPAC1071.06 |arp9||SWI/SNF and RSC complex subunit
Arp9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 523
Score = 50.0 bits (114), Expect = 4e-07
Identities = 26/76 (34%), Positives = 39/76 (51%)
Frame = +3
Query: 261 TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLD 440
TQ FE P +A + ++ LYA G G+V+D G + PI +G + A +L
Sbjct: 166 TQFFFEECQVPGFTIAYEPLMGLYAIGILHGLVIDIGYEKTDITPILDGQIIFTATQQLP 225
Query: 441 LAGRDLTDYLMKILTE 488
L GR +T +L +L E
Sbjct: 226 LGGRYMTQHLQNLLRE 241
Score = 25.8 bits (54), Expect = 6.9
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = +1
Query: 112 PIEHGIVTNWDDMEKIWHHTF 174
PI+ G V +W+ ++ W H +
Sbjct: 113 PIQRGRVVDWEALKAFWKHLY 133
>SPAC23D3.09 |arp42|arp4|SWI/SNF and RSC complex subunit
Arp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 430
Score = 48.8 bits (111), Expect = 8e-07
Identities = 24/93 (25%), Positives = 46/93 (49%)
Frame = +3
Query: 237 PQGQQRKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYAL 416
PQ ++++ + FE + PA Y+ QAV +A+ ++T +++D G + P+ +G +
Sbjct: 113 PQSVRQQIMEAAFEQLHVPAFYLTKQAVCVAFANSKSTALIVDIGSDNASVTPVVDGLII 172
Query: 417 PHAILRLDLAGRDLTDYLMKILTERGYSFTTPP 515
I + LAG L + ++ F PP
Sbjct: 173 RKGIFKQSLAGDFLNANIEQLFNTMNIEF--PP 203
Score = 44.0 bits (99), Expect = 2e-05
Identities = 23/83 (27%), Positives = 43/83 (51%), Gaps = 2/83 (2%)
Frame = +1
Query: 16 PRHQGVMVGMGQKDSYVGDEAQSKRGI--LTLKYPIEHGIVTNWDDMEKIWHHTFYNELR 189
P + GV + ++ YV DE Q I + +K +GI+ +W+ W +L+
Sbjct: 37 PSYYGVRSDVTGRNKYVVDELQIHAPIPGMEVKNGKSNGIIQDWESTLYTWERGLKEKLQ 96
Query: 190 VAPEEHPVLLTEAPLNPKANRER 258
V P E+ +++TE NP++ R++
Sbjct: 97 VNPTEYAMMITEPSWNPQSVRQQ 119
Score = 43.2 bits (97), Expect = 4e-05
Identities = 30/87 (34%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Frame = +2
Query: 515 EREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELPDGQVITIGNERFRCPEALFQP 694
+R ++ + KE + V LD + A A+S + K +E PDG G ERFR E LF P
Sbjct: 249 KRRVIEEWKESVLDV-LDTPFDEAKASSRNP--KPFEFPDGVTHKFGQERFRISEILFNP 305
Query: 695 SFLGMEALR--HPRDHI*LHHEVRRDI 769
SF + P+ + LH V + I
Sbjct: 306 SFSASRSAETTPPQGSVGLHELVYQSI 332
>SPBP23A10.08 |alp5|arp4|actin-like protein Arp4|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 433
Score = 48.4 bits (110), Expect = 1e-06
Identities = 25/87 (28%), Positives = 42/87 (48%)
Frame = +3
Query: 237 PQGQQRKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYAL 416
P + K + MFE+ PA Y+A Q + +ASG+ T ++D G S IY+G+ L
Sbjct: 110 PPENRVKTLETMFESLRCPATYLAKQETCAAFASGKGTACLVDIGAERSSVSAIYDGFVL 169
Query: 417 PHAILRLDLAGRDLTDYLMKILTERGY 497
+G + D L + L ++ +
Sbjct: 170 QKGYQVQHFSGNAINDILAQTLRDKNF 196
Score = 46.4 bits (105), Expect = 5e-06
Identities = 20/52 (38%), Positives = 29/52 (55%)
Frame = +1
Query: 97 LTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANR 252
+ +K I +G V NWD +W + +L+ P EHP+L+TE NP NR
Sbjct: 63 MEIKNAIRNGWVENWDVTVDLWRYGLEQQLKTNPLEHPILITEPFDNPPENR 114
Score = 33.1 bits (72), Expect = 0.045
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2
Query: 590 AASSSSLEKSYELPDGQVITIGNERFRCPEALFQP 694
++ ++ E +E PDG + G ER++ PE LF P
Sbjct: 254 SSETTIAESEFEFPDGSRMMFGAERYQIPEHLFVP 288
>SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 401
Score = 42.7 bits (96), Expect = 6e-05
Identities = 30/81 (37%), Positives = 39/81 (48%), Gaps = 20/81 (24%)
Frame = +2
Query: 515 EREIVRDIKEKLCYVALDFEQEMATAASS--SSLEKSYELPD------------------ 634
E IV +IKE +CYV+ +F+++M S LE Y LPD
Sbjct: 211 ETYIVNEIKESVCYVSQNFKEDMEICHEKPRSKLEICYALPDYSTGKHGYIVRDINQKIE 270
Query: 635 GQVITIGNERFRCPEALFQPS 697
QV+ + NERF PE LF PS
Sbjct: 271 QQVLNLSNERFMIPELLFSPS 291
Score = 41.1 bits (92), Expect = 2e-04
Identities = 16/49 (32%), Positives = 32/49 (65%)
Frame = +3
Query: 354 IVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYS 500
+V+DSG +H +P+ + A+ R+D+ G+ LT+YL ++++ R Y+
Sbjct: 159 LVIDSGYSFTHIIPVIDFSVQEQAVKRVDVGGKLLTNYLKEVISYRKYN 207
>SPAC664.02c |||actin-like protein Arp8 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 620
Score = 33.9 bits (74), Expect = 0.026
Identities = 16/83 (19%), Positives = 41/83 (49%)
Frame = +3
Query: 255 KMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILR 434
K+ I+F + + +++ + + +G + V+D G + + EG +P++ ++
Sbjct: 261 KILDILFFDLHFGKAAIVQESLCTSFGAGMSAACVVDMGAQKTSISCVEEGVVVPNSRIK 320
Query: 435 LDLAGRDLTDYLMKILTERGYSF 503
++ G D+T MK+L + +
Sbjct: 321 INYGGDDITLLFMKLLMRSHFPY 343
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 32.7 bits (71), Expect = 0.060
Identities = 23/74 (31%), Positives = 29/74 (39%), Gaps = 3/74 (4%)
Frame = +1
Query: 217 LTEAPLNPKANRER*PRSCSKHSTRP---PCTSPSKPCSRCTRPVVPPVSCWTPATVSPT 387
L P PK + + P P P T+P P T PV P S P+ P
Sbjct: 1008 LARVPPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPV-PKSSSGAPSAPPPV 1066
Query: 388 PCPSTKDTHSPTPS 429
P PS++ P PS
Sbjct: 1067 PAPSSEIPSIPAPS 1080
Score = 28.3 bits (60), Expect = 1.3
Identities = 18/51 (35%), Positives = 21/51 (41%), Gaps = 5/51 (9%)
Frame = +1
Query: 292 PPCTSPSKPCSRCTRPVVPPVSCWTP-----ATVSPTPCPSTKDTHSPTPS 429
PP +P P P VPP S P A + P P P+ K P PS
Sbjct: 1193 PPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPS 1243
Score = 26.6 bits (56), Expect = 3.9
Identities = 17/48 (35%), Positives = 19/48 (39%), Gaps = 2/48 (4%)
Frame = +1
Query: 292 PPCTSPSKPCSRCTRP--VVPPVSCWTPATVSPTPCPSTKDTHSPTPS 429
PP PS +P VPPV P+ P P PS P PS
Sbjct: 1092 PPVPKPSVAAPPVPKPSVAVPPVPA--PSGAPPVPKPSVAAPPVPVPS 1137
Score = 25.8 bits (54), Expect = 6.9
Identities = 17/48 (35%), Positives = 20/48 (41%), Gaps = 2/48 (4%)
Frame = +1
Query: 292 PPCTSPSKPCSRCTRPV--VPPVSCWTPATVSPTPCPSTKDTHSPTPS 429
PP +PS +P VPPV P+ P P PS P PS
Sbjct: 1169 PPVPAPSSGIPPVPKPAAGVPPVP--PPSEAPPVPKPSVGVPPVPPPS 1214
>SPBC947.01 |||AAA family ATPase, unknown biological
role|Schizosaccharomyces pombe|chr 2|||Manual
Length = 660
Score = 31.9 bits (69), Expect = 0.10
Identities = 28/96 (29%), Positives = 46/96 (47%), Gaps = 4/96 (4%)
Frame = +3
Query: 495 YSFTTPPSGK--SFVTSRRSCATSLLTSSR--KWPPLHPAAPSRSLTNFPTVRSSLSETK 662
YS +PPS S V+S A S L S+ + PPL P P S + + ++ S++
Sbjct: 144 YSKHSPPSTSTSSIVSSSYGDAPSYLAPSKPNRSPPLKPEDPFASFNSSASAIAAASKSA 203
Query: 663 DSVAQRLSSNPRSWVWKLCGIHETTYNSIMKCDGTS 770
+ A LSS+ + ++ TT+ + MK T+
Sbjct: 204 AASASALSSD----TGRSATMNSTTFPTAMKSQSTT 235
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 31.5 bits (68), Expect = 0.14
Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +1
Query: 268 SCSKHSTRPPCTSPSKPCSRCTRPVVPPVS-CWTPATVSPTPCPSTKDTHSPTPS 429
SC+ ++ PP T S S P VPP S T + PT ST SP P+
Sbjct: 171 SCTTSTSIPP-TGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSSPLPT 224
Score = 30.3 bits (65), Expect = 0.32
Identities = 19/55 (34%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = +1
Query: 268 SCSKHSTRPPCTSPSKPCSRCTRPVVPPVS-CWTPATVSPTPCPSTKDTHSPTPS 429
SC+ ++ PP T S S P VPP S T + PT ST +P P+
Sbjct: 114 SCTTSTSIPP-TGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSNPLPT 167
Score = 27.9 bits (59), Expect = 1.7
Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
Frame = +1
Query: 268 SCSKHSTRPPCTSPSKPCSRCTRPVVPPVS-CWTPATVSPTPCPSTKDTHSPTPS 429
SC+ ++ P T S S P VPP S T + PT ST SP P+
Sbjct: 228 SCTTSTSIP--TGGSSSLSTPITPTVPPTSTSSTSIPIPPTSTSSTDTNSSPLPT 280
Score = 27.9 bits (59), Expect = 1.7
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = +1
Query: 262 PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 429
P S S ST PP S S + + + SC T ++ PT +T T + P+
Sbjct: 361 PTSTSSTSTPPPPASTSSTGTSSSPLLSTSTSCTTSTSIPPTGNSTTPVTPTVPPT 416
Score = 27.9 bits (59), Expect = 1.7
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Frame = +1
Query: 268 SCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPC-PSTKDTHSPTP 426
SC+ ++ PP + + P + P VPP S TP T T C ST ++ TP
Sbjct: 392 SCTTSTSIPPTGNSTTPVT----PTVPPTSSSTPLTT--TNCTTSTSVPYTSTP 439
Score = 26.6 bits (56), Expect = 3.9
Identities = 18/73 (24%), Positives = 25/73 (34%)
Frame = +1
Query: 208 PVLLTEAPLNPKANRER*PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPT 387
PV T P + + P + + + PS S T +PP T
Sbjct: 300 PVTPTVPPTSTSSTSTPPPPASTSSTGTSSSPLPSTSTSCTTSTSIPPTGNSTTPVTPTV 359
Query: 388 PCPSTKDTHSPTP 426
P ST T +P P
Sbjct: 360 PPTSTSSTSTPPP 372
Score = 26.6 bits (56), Expect = 3.9
Identities = 17/56 (30%), Positives = 24/56 (42%)
Frame = +1
Query: 262 PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSPTPS 429
P S S ST PP S S + + SC T ++ PT +T T + P+
Sbjct: 307 PTSTSSTSTPPPPASTSSTGTSSSPLPSTSTSCTTSTSIPPTGNSTTPVTPTVPPT 362
>SPCC18.03 |||shuttle craft like transcriptional
regulator|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1077
Score = 29.5 bits (63), Expect = 0.56
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +1
Query: 316 PCSRCTRPVVPPVSCWTPATVSPTPCPSTKDTHSP 420
PC+ + PPV+C TP P C K H P
Sbjct: 621 PCTCGRTRLYPPVACGTPIPDCPYLCVLPKSCHHP 655
>SPAC7D4.14c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 551
Score = 29.1 bits (62), Expect = 0.74
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +2
Query: 191 SPPRNTQSCSLRLPSTPRPTEKDDPDHVRN 280
SPP++T+ S R PS P EK+ V+N
Sbjct: 285 SPPQSTRPSSTRFPSVPLSDEKNSIVSVKN 314
>SPAC3C7.12 |tip1|noc1|CLIP170 family protein
Tip1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 461
Score = 29.1 bits (62), Expect = 0.74
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = +2
Query: 464 LPHEDPHRARLLVHYTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYELP 631
LP P R + L Y E E++R+ EKL AL E++ + SL+++ P
Sbjct: 315 LPENHPQRRQTLEFYEIEIEVLREKVEKL--QALSDEKDFYISKLEKSLDRNDTTP 368
>SPBC30B4.04c |sol1||SWI/SNF complex subunit
Sol1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 865
Score = 28.3 bits (60), Expect = 1.3
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = +3
Query: 525 SFVTSRRSCATSLLTSSRKWPPLHPAAPSRSLTNFPTVRSSLSETKDSVAQRLSSNP 695
+F +R S A SS + P +P+AP+R PTV++S S A+ ++ P
Sbjct: 335 AFTANRFSPAAPTTVSSERNAPPYPSAPTRPTP--PTVQTSSSAAPVDSAEPVAYQP 389
>SPAC6G10.10c |||human hmmtag2 homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 194
Score = 28.3 bits (60), Expect = 1.3
Identities = 26/82 (31%), Positives = 31/82 (37%), Gaps = 3/82 (3%)
Frame = +2
Query: 248 TEKDDPDHVRNIQHARHV---RRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLRRIRTP 418
TEKD + +R RH R R RS HR+ G RR P+R HL R
Sbjct: 112 TEKDSRSIAHSTSRSRSTSPANRH-RRKEKERTRSNHRH--GSHRRHEPYRTHLSRHH-- 166
Query: 419 PRHPASGLSRSRPHRLPHEDPH 484
RH + R R H
Sbjct: 167 -RHSTTNYHSKRDDRYERRREH 187
>SPBC4C3.12 |sep1||fork head transcription factor
Sep1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 663
Score = 27.9 bits (59), Expect = 1.7
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = +1
Query: 175 YNELRVAPEEHPVLLTEAPLNPK-ANRER*PRSCSKHSTRPPCTSPSKPCSRCTRPVVPP 351
Y+EL +A +E P L P PK A++ + + K + S KP S+ TRP +P
Sbjct: 23 YSELPIAYQEIP--LQSLPPYPKVASKLKGVVAGGKENN---IASFQKPSSKATRPYIPS 77
Query: 352 VSCWTPATVSPTPCP 396
+ T +V P P P
Sbjct: 78 YTRLT-YSVPPLPIP 91
>SPCC757.09c |rnc1||RNA-binding protein that suppresses calcineurin
deletion Rnc1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 398
Score = 27.1 bits (57), Expect = 3.0
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +1
Query: 316 PCSRCTRPVVPPVSCWTPATVSPTPCPST 402
P SR T+P+ S +P VSP PST
Sbjct: 262 PVSRLTQPLPSLASTASPQQVSPPAAPST 290
>SPBC530.13 |||cyclin Ctk2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 325
Score = 27.1 bits (57), Expect = 3.0
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = +2
Query: 452 RPHRLPHEDPHRARLLVHYTAEREIVRDIKEKLCYVALDFEQE 580
RP + P DPH + L Y + +++ KE LD +++
Sbjct: 263 RPQKPPQIDPHSSSLADEYRESNKRLQESKESCARFILDCDRK 305
>SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 27.1 bits (57), Expect = 3.0
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = +1
Query: 292 PPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPS 399
PP P + T PV PV+ A P P P+
Sbjct: 367 PPPVMPQPAAAAVTTPVAAPVAAAAAAVPVPPPAPA 402
>SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1666
Score = 26.6 bits (56), Expect = 3.9
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = +1
Query: 172 FYNELRVAPEEHPVLLTE--APLNPKANRER*PRSCSKHSTRP 294
+Y L E+HP+LLT+ A L P+ + R R K P
Sbjct: 1399 YYRALNFYLEQHPMLLTDLLAALTPRIDHPRVIRIFEKSENTP 1441
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 26.6 bits (56), Expect = 3.9
Identities = 27/88 (30%), Positives = 37/88 (42%), Gaps = 1/88 (1%)
Frame = +1
Query: 151 EKIWHHTFYNELRVAPEEHPVLLTE-APLNPKANRER*PRSCSKHSTRPPCTSPSKPCSR 327
E+I T E P H + T AP+ PK ++ + S T P TS + P +
Sbjct: 784 EEIQRLTMLLEPHAVPPIHQIKQTGYAPVQPKTSQ-----ASSILPTVPRTTSYTSPYAT 838
Query: 328 CTRPVVPPVSCWTPATVSPTPCPSTKDT 411
+ + TPA V P P PST T
Sbjct: 839 TSSHI-------TPADVHPLPPPSTSTT 859
Score = 25.4 bits (53), Expect = 9.1
Identities = 18/50 (36%), Positives = 21/50 (42%), Gaps = 3/50 (6%)
Frame = +1
Query: 310 SKPCSRCTRPVVPPVSCWT---PATVSPTPCPSTKDTHSPTPSCVWT*PV 450
S+ S T P PP + T PA SP P + H PT S PV
Sbjct: 899 SRTSSVSTLPPPPPTASMTASAPAIASPPPPKVGETYHPPTASGTRVPPV 948
>SPBC21D10.06c |map4||cell agglutination protein
Map4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 948
Score = 26.6 bits (56), Expect = 3.9
Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 5/88 (5%)
Frame = +3
Query: 495 YSFTTPPSGKSFVTSRR----SCATSLLTSSRKWPPLH-PAAPSRSLTNFPTVRSSLSET 659
Y+F+TP SG SF + + SL +S++K P P + T P+V ++ +
Sbjct: 382 YNFSTPISGSSFPDGFKPINPTSFPSLTSSTKKIPSTTLPTSSKMITTTTPSVSNNTQSS 441
Query: 660 KDSVAQRLSSNPRSWVWKLCGIHETTYN 743
++ SS S +K+ + T+ N
Sbjct: 442 FLIISTFTSSYEHSEPFKVSSVPLTSNN 469
>SPBC1271.02 |stt3||oligosaccharyltransferase subunit
Stt3|Schizosaccharomyces pombe|chr 2|||Manual
Length = 752
Score = 26.2 bits (55), Expect = 5.2
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +2
Query: 428 PASGLSRSRPHRLPHEDPHRARLLVHYTAEREIVRDIKEK 547
P G R+R +LP +DP + +T +VR K K
Sbjct: 677 PNQGYDRARNQKLPSKDPQLFTIEEAFTTVHHLVRLYKVK 716
>SPAC20G8.05c |cdc15||cell division control protein
Cdc15|Schizosaccharomyces pombe|chr 1|||Manual
Length = 927
Score = 26.2 bits (55), Expect = 5.2
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -1
Query: 79 VPHLLHKSPSVPYRPSRPDGGA 14
+ L+ K+PS PY SRP A
Sbjct: 306 IDQLISKAPSYPYSSSRPSASA 327
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 26.2 bits (55), Expect = 5.2
Identities = 23/92 (25%), Positives = 36/92 (39%), Gaps = 7/92 (7%)
Frame = +1
Query: 166 HTFYNELRVAPEEHPVLL---TEAPLNPK----ANRER*PRSCSKHSTRPPCTSPSKPCS 324
H +N +P +P L T P NP A S+H + +PS +
Sbjct: 201 HPIHNHPYSSPTSYPPPLCPATYCPSNPPQLAPATAIAPSSQSSQHKSVNYSVTPSSINN 260
Query: 325 RCTRPVVPPVSCWTPATVSPTPCPSTKDTHSP 420
P+ P ++ W P T PT P + + + P
Sbjct: 261 HTAVPLSPTLAVWLPMT-QPTFQPPSANVYQP 291
>SPAC3H8.08c |||transcription factor|Schizosaccharomyces pombe|chr
1|||Manual
Length = 563
Score = 25.8 bits (54), Expect = 6.9
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +1
Query: 217 LTEAPLNPKANRER*PRSCSKHSTRPPCTSPSKPCSRC 330
++ +P K R+R P+SC R +PCSRC
Sbjct: 1 MSSSPPALKKFRKRSPKSCLICRRRKVKCDRQQPCSRC 38
>SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase
Tor2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2337
Score = 25.8 bits (54), Expect = 6.9
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = -2
Query: 108 FEGQDTSFALCLISYIRVLLSHTDHHA 28
+EG+DT+ +Y+R++L TD A
Sbjct: 74 YEGEDTTRITRFANYLRIILPGTDQKA 100
>SPBC1683.13c |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 618
Score = 25.8 bits (54), Expect = 6.9
Identities = 25/99 (25%), Positives = 42/99 (42%), Gaps = 2/99 (2%)
Frame = +2
Query: 389 RAHLRRIRTPPRHPASGLSRSRPHRLPHEDPHRARLLVHYTAEREIVRDIKEKLCYVALD 568
R R+I+ HP +S EDP R R A +E V ++ ++ +
Sbjct: 21 RCRQRKIKCDRLHPCFQCVKSNSQCFYPEDPIRRR------APKEYVEALERQIAF---- 70
Query: 569 FEQEMATAASSSSLEKSYELPD--GQVITIGNERFRCPE 679
FE + A S E+S + D +++ GNE + P+
Sbjct: 71 FEAFVKKLAKVGSDEQSLMIQDMNNKIVNEGNEYDQTPD 109
>SPAC23C4.10 |sec2||guanyl-nucleotide exchange factor Sec2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 527
Score = 25.4 bits (53), Expect = 9.1
Identities = 17/51 (33%), Positives = 22/51 (43%)
Frame = -1
Query: 757 HFMMELYVVSWMPQSFHTQERGLEESLWATESFVSDSDDLTVGKFVRLLEG 605
H + EL V H Q L L T SFV +D+++VG F G
Sbjct: 159 HQLTELKDVMHSMSDSHEQNNALHPPLSRTTSFV--ADNVSVGSFASSTSG 207
>SPAC17H9.01 |cid16||poly|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1202
Score = 25.4 bits (53), Expect = 9.1
Identities = 17/54 (31%), Positives = 25/54 (46%)
Frame = +3
Query: 468 LMKILTERGYSFTTPPSGKSFVTSRRSCATSLLTSSRKWPPLHPAAPSRSLTNF 629
L K+L E S S + S + +S TSSRK+ + + S LT+F
Sbjct: 713 LRKLLEEADTSSNFSSSNNHVLDSSKHTVSSASTSSRKFIENYKSLESIGLTSF 766
>SPCC1020.01c |pma2|SPCC1393.01|P-type proton ATPase Pma2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1010
Score = 25.4 bits (53), Expect = 9.1
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = -1
Query: 649 SDDLTVGKFVRLLEGAAGCSGGHFLLEVKSDVAQLLL 539
+D VG+ L+ GAAG S GHF EV + + +LL
Sbjct: 350 ADSTFVGRAASLV-GAAGQSQGHF-TEVLNGIGTILL 384
>SPCC364.02c |bis1||stress response protein Bis1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 384
Score = 25.4 bits (53), Expect = 9.1
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = +3
Query: 498 SFTTPPSGKSFVTSRRSCATSLLTSSRKWPPLHPAAPSRS 617
S++TP S +T+ A L+ S PLH ++PS S
Sbjct: 315 SYSTPNSVSRKLTNLTPAARRLVARSYLRSPLHGSSPSAS 354
>SPBC530.14c |dsk1||SR protein-specific kinase
Dsk1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 544
Score = 25.4 bits (53), Expect = 9.1
Identities = 15/55 (27%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Frame = +3
Query: 540 RRSCATSLLTSSRKWPPLHPAAPSRS-LTNFPTVRSSLSETKDSVAQRLSSNPRS 701
R++ A + +S+ + P++P S L+ FP++ ++SE +Q+ +S+P S
Sbjct: 276 RKTFAKNPTKNSKPAGQVIPSSPFTSTLSRFPSLEGAVSEISLRDSQKHNSHPNS 330
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 25.4 bits (53), Expect = 9.1
Identities = 29/93 (31%), Positives = 37/93 (39%), Gaps = 2/93 (2%)
Frame = +3
Query: 498 SFTTPPSGKSFVTSRRSCATSLLTSSRKWPPLHPAAPSRSLTNFPTVRSSLSETKDSVA- 674
S TT S S T+ + AT TSS L A S S T+ SSL+ T + A
Sbjct: 152 SSTTSSSLASSSTNSTTSATP--TSSATSSSLSSTAASNSATSSSLASSSLNSTTSATAT 209
Query: 675 -QRLSSNPRSWVWKLCGIHETTYNSIMKCDGTS 770
LSS S + ++ NS TS
Sbjct: 210 SSSLSSTAASNSATSSSLASSSLNSTTSATATS 242
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 25.4 bits (53), Expect = 9.1
Identities = 19/67 (28%), Positives = 26/67 (38%)
Frame = +1
Query: 217 LTEAPLNPKANRER*PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCP 396
L P PK ER S S+ + +P +PS P +P PV P+ P P
Sbjct: 482 LNPPPAMPKVFPERDISSASQKAAQPSVITPSVP-----QPPAAPVVPEAPSVHQPPAAP 536
Query: 397 STKDTHS 417
+ S
Sbjct: 537 VAPEVPS 543
>SPAC1D4.14 |tho2|SPAC22F3.14c|THO complex subunit Tho2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1628
Score = 25.4 bits (53), Expect = 9.1
Identities = 20/83 (24%), Positives = 37/83 (44%)
Frame = +2
Query: 224 RLPSTPRPTEKDDPDHVRNIQHARHVRRHPSRALAVRVRSYHRYRAGLRRRCLPHRAHLR 403
R P + R ++ D++R++ +RH RR P +A + R H + R R ++
Sbjct: 1427 RTPQS-RSFTNENNDNLRSV--SRHTRREPQQAQNLNARREHESQKSDRWR---QNGNVN 1480
Query: 404 RIRTPPRHPASGLSRSRPHRLPH 472
R + ++ +SR R H
Sbjct: 1481 RNPRVSNNNSTNVSRERSSEANH 1503
>SPAC2F3.15 |lsk1||latrunculin sensitive kinase Lsk1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 593
Score = 25.4 bits (53), Expect = 9.1
Identities = 19/58 (32%), Positives = 24/58 (41%)
Frame = +1
Query: 226 APLNPKANRER*PRSCSKHSTRPPCTSPSKPCSRCTRPVVPPVSCWTPATVSPTPCPS 399
+P++P ANR R S PP + KP + R V S SP P PS
Sbjct: 146 SPISPSANRNDSKRQASSFRRSPPSSVHMKPSAFNGRKVSRRPSS------SPPPIPS 197
>SPCC1322.03 |||TRP-like ion channel|Schizosaccharomyces pombe|chr
3|||Manual
Length = 862
Score = 25.4 bits (53), Expect = 9.1
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +3
Query: 483 TERGYSFTTPPSGKSFVTSR 542
T +GYSF PP KS V R
Sbjct: 699 TSQGYSFYRPPKPKSSVRKR 718
>SPAC17A2.13c |rad25||14-3-3 protein Rad25|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 270
Score = 25.4 bits (53), Expect = 9.1
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +2
Query: 464 LPHEDPHRARLLVHYTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 625
LP DP R L ++++ + D E C++A E + S S E+SY+
Sbjct: 164 LPPTDPMRLGLALNFSVFYYEILDSPESACHLAKQVFDEAISELDSLS-EESYK 216
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,587,178
Number of Sequences: 5004
Number of extensions: 82360
Number of successful extensions: 376
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 303
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 364
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 371330890
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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