Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20275
         (778 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4Y889 Cluster: Putative uncharacterized protein; n=1; ...    36   0.85 
UniRef50_Q4Z5U0 Cluster: Putative uncharacterized protein; n=1; ...    36   1.5  
UniRef50_Q6YRF8 Cluster: Putative uncharacterized protein; n=1; ...    35   2.6  
UniRef50_Q7RH67 Cluster: Putative uncharacterized protein PY0412...    35   2.6  
UniRef50_UPI00015A52A9 Cluster: UPI00015A52A9 related cluster; n...    34   3.4  
UniRef50_Q8IJK3 Cluster: Putative uncharacterized protein; n=1; ...    34   3.4  
UniRef50_Q8IBJ6 Cluster: Putative uncharacterized protein MAL7P1...    34   3.4  
UniRef50_Q4XCU2 Cluster: Putative uncharacterized protein; n=1; ...    33   6.0  
UniRef50_Q33563 Cluster: EATRO 164 kinetoplast; n=1; Trypanosoma...    33   6.0  
UniRef50_Q6CB32 Cluster: Similarity; n=2; root|Rep: Similarity -...    33   6.0  
UniRef50_Q73N67 Cluster: CAAX amino terminal protease family pro...    33   8.0  
UniRef50_Q4V6X7 Cluster: IP01239p; n=2; Drosophila melanogaster|...    33   8.0  
UniRef50_Q4L1C4 Cluster: NADH-ubiquinone oxidoreductase chain 4;...    33   8.0  
UniRef50_A4VEG6 Cluster: Putative uncharacterized protein; n=1; ...    33   8.0  

>UniRef50_Q4Y889 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium chabaudi|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 104

 Score = 36.3 bits (80), Expect = 0.85
 Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
 Frame = +3

Query: 609 SCCFWIPNFYSLYHFKDF-FINFFYVLIISFNVIYTFILCVLTIYLKCIFYFI 764
           +CCF   N Y L++  DF FI   Y+   +F    TFI+ ++ I L   F+FI
Sbjct: 15  NCCF---NMYMLFYSFDFRFILSSYINTFTFVTFVTFIMLIMLIMLIIFFHFI 64


>UniRef50_Q4Z5U0 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium berghei|Rep: Putative uncharacterized protein
           - Plasmodium berghei
          Length = 86

 Score = 35.5 bits (78), Expect = 1.5
 Identities = 17/46 (36%), Positives = 26/46 (56%)
 Frame = +3

Query: 633 FYSLYHFKDFFINFFYVLIISFNVIYTFILCVLTIYLKCIFYFINV 770
           F  LY+F   FI F+Y L+  F ++Y F+LC +  Y+    Y  N+
Sbjct: 34  FIMLYYFLLCFIIFYYALLF-FIMLYYFLLCFIIFYVLLFIYKPNL 78


>UniRef50_Q6YRF8 Cluster: Putative uncharacterized protein; n=1;
           Onion yellows phytoplasma|Rep: Putative uncharacterized
           protein - Onion yellows phytoplasma
          Length = 311

 Score = 34.7 bits (76), Expect = 2.6
 Identities = 13/32 (40%), Positives = 24/32 (75%)
 Frame = +3

Query: 636 YSLYHFKDFFINFFYVLIISFNVIYTFILCVL 731
           +SLY + ++F NFF+++I+ F  + TFI+ +L
Sbjct: 217 FSLYCYHNYFSNFFFLIILIFLSLITFIIGIL 248


>UniRef50_Q7RH67 Cluster: Putative uncharacterized protein PY04123;
           n=1; Plasmodium yoelii yoelii|Rep: Putative
           uncharacterized protein PY04123 - Plasmodium yoelii
           yoelii
          Length = 62

 Score = 34.7 bits (76), Expect = 2.6
 Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 4/49 (8%)
 Frame = +3

Query: 624 IPNFYSLYHFKDFFINFFYVLIISFNVIYTFIL----CVLTIYLKCIFY 758
           +  F   Y FK  ++ F ++L  SF   ++F+L    C+L +Y+ CI+Y
Sbjct: 10  VDRFTKYYIFKFLYLYFHFILFYSF--FFSFLLLSLKCILYVYIICIYY 56


>UniRef50_UPI00015A52A9 Cluster: UPI00015A52A9 related cluster; n=2;
            Danio rerio|Rep: UPI00015A52A9 UniRef100 entry - Danio
            rerio
          Length = 2279

 Score = 34.3 bits (75), Expect = 3.4
 Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
 Frame = +3

Query: 621  WIPNFYSLYHFKDFFINFFYVLIISFNVIYTFILCVL----TIYLKCIFYFIN 767
            +I   Y LY F  FFI FF++  + FN+I  F + +L     I   C+  F N
Sbjct: 1271 YIIYLYYLYIFSCFFICFFFIFNLIFNIILYFAIFILHPFYCIITVCLIVFSN 1323


>UniRef50_Q8IJK3 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium falciparum 3D7|Rep: Putative uncharacterized
           protein - Plasmodium falciparum (isolate 3D7)
          Length = 865

 Score = 34.3 bits (75), Expect = 3.4
 Identities = 14/46 (30%), Positives = 24/46 (52%)
 Frame = +3

Query: 633 FYSLYHFKDFFINFFYVLIISFNVIYTFILCVLTIYLKCIFYFINV 770
           F+  Y +  F +  FY+ + S+  I +FI   L  +  C FY I++
Sbjct: 9   FFFKYIYNIFILTCFYITLSSYYFIISFIFSTLMFFYFCTFYVISL 54


>UniRef50_Q8IBJ6 Cluster: Putative uncharacterized protein
           MAL7P1.142; n=1; Plasmodium falciparum 3D7|Rep: Putative
           uncharacterized protein MAL7P1.142 - Plasmodium
           falciparum (isolate 3D7)
          Length = 418

 Score = 34.3 bits (75), Expect = 3.4
 Identities = 15/52 (28%), Positives = 28/52 (53%)
 Frame = +3

Query: 609 SCCFWIPNFYSLYHFKDFFINFFYVLIISFNVIYTFILCVLTIYLKCIFYFI 764
           S  +++ +F S ++F   FI+FFY L+   +  Y  +  +   Y+   +YFI
Sbjct: 32  SFLYFLVHFISFFYFLVHFISFFYFLVHFISFFYFLVHFISFFYVHHSYYFI 83


>UniRef50_Q4XCU2 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium chabaudi|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 91

 Score = 33.5 bits (73), Expect = 6.0
 Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
 Frame = +3

Query: 633 FYSLYHFKDFFINFF--YVLIISFNVIYTFILCVLTIY 740
           FY  + F +FF+NFF  Y L   F ++Y+ I   L IY
Sbjct: 34  FYLFHTFINFFLNFFMIYYLFFHFLLLYSLIFIFLQIY 71


>UniRef50_Q33563 Cluster: EATRO 164 kinetoplast; n=1; Trypanosoma
           brucei|Rep: EATRO 164 kinetoplast - Trypanosoma brucei
          Length = 141

 Score = 33.5 bits (73), Expect = 6.0
 Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
 Frame = +3

Query: 618 FWIPNFYSLYHFKDFFINFFYVLIISFNVIYTFILCVL--TIYLKCIFYF 761
           FW+  FY  +   D  + FF  +II F   + F+LC L    YL C+ +F
Sbjct: 51  FWVVIFYWCF---DCIVYFFCDVIILFIFFFYFVLCFLYCCFYLVCLVFF 97


>UniRef50_Q6CB32 Cluster: Similarity; n=2; root|Rep: Similarity -
           Yarrowia lipolytica (Candida lipolytica)
          Length = 281

 Score = 33.5 bits (73), Expect = 6.0
 Identities = 18/49 (36%), Positives = 27/49 (55%)
 Frame = +3

Query: 618 FWIPNFYSLYHFKDFFINFFYVLIISFNVIYTFILCVLTIYLKCIFYFI 764
           ++I   +S  +F  FF  FFY+ I  F  I+ FI   + I++  IF FI
Sbjct: 22  YFIYFIFSFSYFFFFFFFFFYIFIFIFIFIFIFIFIFIFIFI-FIFIFI 69


>UniRef50_Q73N67 Cluster: CAAX amino terminal protease family
           protein; n=3; Treponema denticola|Rep: CAAX amino
           terminal protease family protein - Treponema denticola
          Length = 292

 Score = 33.1 bits (72), Expect = 8.0
 Identities = 14/47 (29%), Positives = 30/47 (63%)
 Frame = +3

Query: 618 FWIPNFYSLYHFKDFFINFFYVLIISFNVIYTFILCVLTIYLKCIFY 758
           F++ ++   + FK+F+ N++Y L + +N I+  +L +L I +  +FY
Sbjct: 24  FFMLSYAGKFLFKNFY-NYYYTLFVKYNGIFGSLLFLLFIIIFYLFY 69


>UniRef50_Q4V6X7 Cluster: IP01239p; n=2; Drosophila
           melanogaster|Rep: IP01239p - Drosophila melanogaster
           (Fruit fly)
          Length = 360

 Score = 33.1 bits (72), Expect = 8.0
 Identities = 17/47 (36%), Positives = 23/47 (48%)
 Frame = +3

Query: 615 CFWIPNFYSLYHFKDFFINFFYVLIISFNVIYTFILCVLTIYLKCIF 755
           C WI N    ++FK F +  FY  +  F   Y F + V  +YL C F
Sbjct: 177 CPWIVNCVHFHNFKYFILFLFYAEVYCF---YLFCVMVYDLYLICGF 220


>UniRef50_Q4L1C4 Cluster: NADH-ubiquinone oxidoreductase chain 4;
           n=1; Lepeophtheirus salmonis|Rep: NADH-ubiquinone
           oxidoreductase chain 4 - Lepeophtheirus salmonis (salmon
           louse)
          Length = 431

 Score = 33.1 bits (72), Expect = 8.0
 Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
 Frame = +3

Query: 648 HFKDFFINFFYVLIISFNVI---YTFILCVLTIYLKCIFYFINV*H 776
           H   FF+ FF  ++ISF+V+      +LCV  + +K I  + +V H
Sbjct: 223 HMNSFFLGFFTKVMISFSVVVAALAMMLCVTQVDMKVIIAYSSVGH 268


>UniRef50_A4VEG6 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 347

 Score = 33.1 bits (72), Expect = 8.0
 Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
 Frame = +3

Query: 630 NFYSLYHFKDFFINFFYVLIIS--FNVIYTFILCVLTIYLKC 749
           + ++L+ F  +F NFFY+LI++  FN    F   +L I L C
Sbjct: 272 SLFNLFFFFIYFTNFFYLLILNIIFNQKILFCFIILVIILIC 313


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 659,484,100
Number of Sequences: 1657284
Number of extensions: 11944413
Number of successful extensions: 23278
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 22226
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23181
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 65438977305
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)