Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20273
(731 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q2F5N9 Cluster: Nucleoplasmin isoform 2; n=7; Endoptery... 117 3e-25
UniRef50_UPI00015B5EC5 Cluster: PREDICTED: similar to nucleoplas... 64 3e-09
UniRef50_Q9VAC4 Cluster: CG7911-PA; n=2; Sophophora|Rep: CG7911-... 59 1e-07
UniRef50_Q27415 Cluster: Nucleoplasmin-like protein; n=4; Sophop... 58 3e-07
UniRef50_A2I421 Cluster: Nucleoplasmin isoform 1-like protein; n... 56 1e-06
UniRef50_P91753 Cluster: Mitotic apparatus protein p62; n=3; Ech... 41 0.027
UniRef50_Q8WSV9 Cluster: Nucleolar protein; n=2; Patiria pectini... 33 5.5
UniRef50_A7TZ48 Cluster: Nucleoplasmin-like protein; n=1; Lepeop... 33 9.5
>UniRef50_Q2F5N9 Cluster: Nucleoplasmin isoform 2; n=7;
Endopterygota|Rep: Nucleoplasmin isoform 2 - Bombyx mori
(Silk moth)
Length = 187
Score = 117 bits (282), Expect = 3e-25
Identities = 54/54 (100%), Positives = 54/54 (100%)
Frame = +3
Query: 93 MTDEFFYGVTLSSSHQSETWDPEAKAEYPRSNKLVIRQALLGPDAKPDELNVIQ 254
MTDEFFYGVTLSSSHQSETWDPEAKAEYPRSNKLVIRQALLGPDAKPDELNVIQ
Sbjct: 1 MTDEFFYGVTLSSSHQSETWDPEAKAEYPRSNKLVIRQALLGPDAKPDELNVIQ 54
Score = 97.1 bits (231), Expect = 4e-19
Identities = 47/47 (100%), Positives = 47/47 (100%)
Frame = +2
Query: 254 VEAMSLQEAVKLPVAVLKVGESRHVRLDIEFPDAPVTFTLVQGSGPV 394
VEAMSLQEAVKLPVAVLKVGESRHVRLDIEFPDAPVTFTLVQGSGPV
Sbjct: 55 VEAMSLQEAVKLPVAVLKVGESRHVRLDIEFPDAPVTFTLVQGSGPV 101
Score = 35.9 bits (79), Expect = 1.0
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = +1
Query: 511 DNEEGEPKGKKAKMS 555
DNEEGEPKGKKAKMS
Sbjct: 157 DNEEGEPKGKKAKMS 171
>UniRef50_UPI00015B5EC5 Cluster: PREDICTED: similar to
nucleoplasmin-like protein; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to
nucleoplasmin-like protein - Nasonia vitripennis
Length = 141
Score = 64.5 bits (150), Expect = 3e-09
Identities = 26/47 (55%), Positives = 39/47 (82%)
Frame = +2
Query: 254 VEAMSLQEAVKLPVAVLKVGESRHVRLDIEFPDAPVTFTLVQGSGPV 394
VEAM L+ +K+P+A+L++G++ + LD+ FPD PVTFTL++GSGPV
Sbjct: 18 VEAMGLKGPIKIPIALLEMGKTSQIILDLSFPDPPVTFTLIKGSGPV 64
>UniRef50_Q9VAC4 Cluster: CG7911-PA; n=2; Sophophora|Rep: CG7911-PA
- Drosophila melanogaster (Fruit fly)
Length = 156
Score = 58.8 bits (136), Expect = 1e-07
Identities = 25/41 (60%), Positives = 35/41 (85%)
Frame = +2
Query: 272 QEAVKLPVAVLKVGESRHVRLDIEFPDAPVTFTLVQGSGPV 394
++ +K+P+AVLKVGE+R +R ++EFP+ VTF LVQGSGPV
Sbjct: 67 KKTLKIPIAVLKVGETRSLRPNVEFPNGSVTFKLVQGSGPV 107
Score = 48.4 bits (110), Expect = 2e-04
Identities = 26/56 (46%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Frame = +3
Query: 93 MTDEFFYGVTLSSSHQSETWD-PEAKAEY-PRSNKLVIRQALLGPDAKPDELNVIQ 254
M E FYGVTLS ++ P+ EY S+KL+I+Q LGP+AK E NV+Q
Sbjct: 1 MESESFYGVTLSEKEAIAQFEVPDVPEEYIVHSHKLIIKQISLGPEAKTGEFNVVQ 56
>UniRef50_Q27415 Cluster: Nucleoplasmin-like protein; n=4;
Sophophora|Rep: Nucleoplasmin-like protein - Drosophila
melanogaster (Fruit fly)
Length = 152
Score = 57.6 bits (133), Expect = 3e-07
Identities = 27/54 (50%), Positives = 37/54 (68%)
Frame = +3
Query: 93 MTDEFFYGVTLSSSHQSETWDPEAKAEYPRSNKLVIRQALLGPDAKPDELNVIQ 254
M +E FYGVTL++ S TWD + +Y R KLVI+Q LLG +AK +E NV++
Sbjct: 1 MAEESFYGVTLTAESDSVTWDVDE--DYARGQKLVIKQILLGAEAKENEFNVVE 52
Score = 55.6 bits (128), Expect = 1e-06
Identities = 24/49 (48%), Positives = 38/49 (77%)
Frame = +2
Query: 248 DTVEAMSLQEAVKLPVAVLKVGESRHVRLDIEFPDAPVTFTLVQGSGPV 394
+ VE + +++V++P+AVLK GE+R V D+EF ++ VTF L++GSGPV
Sbjct: 49 NVVEVNTPKDSVQIPIAVLKAGETRAVNPDVEFYESKVTFKLIKGSGPV 97
>UniRef50_A2I421 Cluster: Nucleoplasmin isoform 1-like protein; n=1;
Maconellicoccus hirsutus|Rep: Nucleoplasmin isoform
1-like protein - Maconellicoccus hirsutus (hibiscus
mealybug)
Length = 176
Score = 55.6 bits (128), Expect = 1e-06
Identities = 25/47 (53%), Positives = 31/47 (65%)
Frame = +2
Query: 254 VEAMSLQEAVKLPVAVLKVGESRHVRLDIEFPDAPVTFTLVQGSGPV 394
VEAM + VK P+ VLK G LD+ FPD PVTF L++GSGP+
Sbjct: 62 VEAMGYKSDVKYPITVLKGGSQHQSLLDLLFPDPPVTFKLIKGSGPI 108
Score = 54.0 bits (124), Expect = 4e-06
Identities = 23/61 (37%), Positives = 41/61 (67%), Gaps = 7/61 (11%)
Frame = +3
Query: 93 MTDEFFYGVTLSSSHQSETWDPEAKAE-------YPRSNKLVIRQALLGPDAKPDELNVI 251
MT+++F+G+TL + S+ WDP+ K + Y + L+++QA+LGP+AK E+NV+
Sbjct: 1 MTEDYFWGLTLDKNKTSDLWDPDVKNDANDSTQGYRGEHTLLVKQAVLGPEAKDGEINVV 60
Query: 252 Q 254
+
Sbjct: 61 E 61
>UniRef50_P91753 Cluster: Mitotic apparatus protein p62; n=3;
Echinacea|Rep: Mitotic apparatus protein p62 -
Lytechinus pictus (Painted sea urchin)
Length = 411
Score = 41.1 bits (92), Expect = 0.027
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 8/62 (12%)
Frame = +3
Query: 93 MTDEFFYGVTLSSSHQSETWDPEA--------KAEYPRSNKLVIRQALLGPDAKPDELNV 248
M E+F+G TLS + WDPE+ E S+ L ++QA+LG +AK D+ NV
Sbjct: 1 MAKEYFWGATLSKDKKIFKWDPESDFLDDEDDDEEDSISHFLFLKQAVLGVNAKDDDRNV 60
Query: 249 IQ 254
I+
Sbjct: 61 IE 62
>UniRef50_Q8WSV9 Cluster: Nucleolar protein; n=2; Patiria
pectinifera|Rep: Nucleolar protein - Asterina
pectinifera (Starfish)
Length = 346
Score = 33.5 bits (73), Expect = 5.5
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 8/62 (12%)
Frame = +3
Query: 93 MTDEFFYGVTLSSSHQSETWDPEAKAEYPRSNK--------LVIRQALLGPDAKPDELNV 248
M+ EFF+G +L+ + + W+P E N L ++QA+LG AK E NV
Sbjct: 1 MSKEFFWGDSLTGTKKEVKWNPSLDDEDDFDNLDSDGIQHFLFLKQAVLGATAKEGERNV 60
Query: 249 IQ 254
++
Sbjct: 61 VE 62
Score = 32.7 bits (71), Expect = 9.5
Identities = 19/38 (50%), Positives = 22/38 (57%)
Frame = +2
Query: 281 VKLPVAVLKVGESRHVRLDIEFPDAPVTFTLVQGSGPV 394
VK P+ LK+G + LDI PVTF L GSGPV
Sbjct: 73 VKQPLFSLKLGLNESSPLDIGI-QPPVTFILTAGSGPV 109
>UniRef50_A7TZ48 Cluster: Nucleoplasmin-like protein; n=1;
Lepeophtheirus salmonis|Rep: Nucleoplasmin-like protein
- Lepeophtheirus salmonis (salmon louse)
Length = 230
Score = 32.7 bits (71), Expect = 9.5
Identities = 13/41 (31%), Positives = 25/41 (60%)
Frame = +2
Query: 272 QEAVKLPVAVLKVGESRHVRLDIEFPDAPVTFTLVQGSGPV 394
+E +K P+ ++K + +D+ F + V FTL +G+GP+
Sbjct: 70 EEEIKCPLVMMKSSSTSQCTVDLSF-NRSVKFTLTEGNGPI 109
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 679,413,025
Number of Sequences: 1657284
Number of extensions: 12170315
Number of successful extensions: 31115
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 29995
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31089
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 59265488880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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