Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20272
         (786 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8IM44 Cluster: Putative uncharacterized protein; n=2; ...    36   1.5  
UniRef50_Q54EE0 Cluster: Putative uncharacterized protein; n=4; ...    34   3.5  

>UniRef50_Q8IM44 Cluster: Putative uncharacterized protein; n=2;
           Plasmodium|Rep: Putative uncharacterized protein -
           Plasmodium falciparum (isolate 3D7)
          Length = 686

 Score = 35.5 bits (78), Expect = 1.5
 Identities = 30/98 (30%), Positives = 46/98 (46%)
 Frame = -1

Query: 645 NFFYIYKLVANDVDIIITYVL*QQDAKVLFDYVFNKLRLHFYVNLC*IKYT*KMFNNFIV 466
           N  YIYK+V  + D +  Y+   Q  +  F+Y   K  +  Y++L   K   K  N +I 
Sbjct: 582 NIDYIYKIVKEEYDKVEAYLKRDQFDEEDFEY---KHLVPIYLDL---KKELKKVNEYIK 635

Query: 465 YSHTNL*RYINVLLNLPNTSVNQTATSHSNNNEKVFFL 352
           + + NL  ++N +    N S N   T   N  EK+F L
Sbjct: 636 F-YGNLISFVNFIQKYANPSTNIVKT-EENGEEKIFDL 671


>UniRef50_Q54EE0 Cluster: Putative uncharacterized protein; n=4;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 558

 Score = 34.3 bits (75), Expect = 3.5
 Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
 Frame = -1

Query: 555 DYVF-NKLRLHFYVNLC*IKYT*KMFNNFI--VYSHTNL*RYINVLLNLPNTSVNQTATS 385
           DY F N++  +F+VN    KY+ K+FN+FI  VY   +     +   +  N S+N    +
Sbjct: 50  DYKFKNEIINYFFVNWNWFKYSQKLFNHFIPHVYLDNDREYDDDFFRSYYNNSINNNNNN 109

Query: 384 HSNNN 370
           ++NNN
Sbjct: 110 NNNNN 114


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 714,006,447
Number of Sequences: 1657284
Number of extensions: 13950025
Number of successful extensions: 28910
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 27324
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28855
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 66673674990
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)