Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20272
         (786 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    23   2.1  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    23   2.1  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    23   2.1  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    23   2.1  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    22   6.4  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    22   6.4  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    22   6.4  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    21   8.4  

>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = -2

Query: 356 FFIRHITVIQYCYFLKKIRI 297
           +FI  +  +QYC++L  +R+
Sbjct: 188 YFINLLMELQYCHYLNILRV 207


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +2

Query: 362 TFSLLLLCEVAVWLTEVFGRFKRT 433
           TF+L  LC    WL  +   F RT
Sbjct: 318 TFNLFYLCFCFYWLLVMVAMFSRT 341


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = -2

Query: 356 FFIRHITVIQYCYFLKKIRI 297
           +FI  +  +QYC++L  +R+
Sbjct: 188 YFINLLMELQYCHYLNILRV 207


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +2

Query: 362 TFSLLLLCEVAVWLTEVFGRFKRT 433
           TF+L  LC    WL  +   F RT
Sbjct: 274 TFNLFYLCFCFYWLLVMVAMFSRT 297


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 14/66 (21%), Positives = 28/66 (42%)
 Frame = -1

Query: 558 FDYVFNKLRLHFYVNLC*IKYT*KMFNNFIVYSHTNL*RYINVLLNLPNTSVNQTATSHS 379
           FDY F K+      +L        +   FI   HT +  + +V + L +T++    T  +
Sbjct: 190 FDYFFGKMSYSHIFSLMDYNIVMALVLQFITLQHTFIWVFNDVFVMLLSTALAYRFTQVT 249

Query: 378 NNNEKV 361
           +  + +
Sbjct: 250 DRTQSM 255


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 14/66 (21%), Positives = 28/66 (42%)
 Frame = -1

Query: 558 FDYVFNKLRLHFYVNLC*IKYT*KMFNNFIVYSHTNL*RYINVLLNLPNTSVNQTATSHS 379
           FDY F K+      +L        +   FI   HT +  + +V + L +T++    T  +
Sbjct: 190 FDYFFGKMSYSHIFSLMDYNIVMALVLQFITLQHTFIWVFNDVFVMLLSTALAYRFTQVT 249

Query: 378 NNNEKV 361
           +  + +
Sbjct: 250 DRTQSM 255


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 14/66 (21%), Positives = 28/66 (42%)
 Frame = -1

Query: 558 FDYVFNKLRLHFYVNLC*IKYT*KMFNNFIVYSHTNL*RYINVLLNLPNTSVNQTATSHS 379
           FDY F K+      +L        +   FI   HT +  + +V + L +T++    T  +
Sbjct: 190 FDYFFGKMSYSHIFSLMDYNIVMALVLQFITLQHTFIWVFNDVFVMLLSTALAYRFTQVT 249

Query: 378 NNNEKV 361
           +  + +
Sbjct: 250 DRTQSM 255


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = -1

Query: 417 PNTSVNQTATSHSNNNEKVFFLYQTYHGNSILLFLEK 307
           P+  +N + TS  N N++    Y+T      L  LEK
Sbjct: 52  PSDKLNTSTTSSVNVNDQNIRRYRTAFTREQLARLEK 88


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,321
Number of Sequences: 336
Number of extensions: 4107
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21272645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)