Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20272
         (786 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0266 - 16582912-16584918,16585041-16585229                       28   9.7  
09_02_0607 - 11183382-11183387,11183481-11183637,11184220-111842...    28   9.7  

>12_02_0266 - 16582912-16584918,16585041-16585229
          Length = 731

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 9/25 (36%), Positives = 17/25 (68%)
 Frame = -2

Query: 743 MKLIFTFTREPLVLCSRRLEDIILF 669
           MK++    REP ++C+ R E +++F
Sbjct: 1   MKMLNLHNREPFLICNGRYESVLIF 25


>09_02_0607 -
           11183382-11183387,11183481-11183637,11184220-11184284,
           11184397-11184469,11184759-11184905,11185515-11185562,
           11185637-11185716,11186112-11186439,11186525-11186576,
           11187397-11187523,11187613-11187990
          Length = 486

 Score = 27.9 bits (59), Expect = 9.7
 Identities = 14/48 (29%), Positives = 26/48 (54%)
 Frame = +3

Query: 603 YQRHWLLVCKCKRNCRARCERPKEDNIFQPSTAKYQRFPCESKDQLHS 746
           +Q+H+L+  + +R  R  C R ++D I +      Q+F  + K + HS
Sbjct: 406 HQKHYLVTPEIRRELRMSCNRGEKDTIMRNG----QQFAVDLKIRSHS 449


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,880,344
Number of Sequences: 37544
Number of extensions: 334718
Number of successful extensions: 543
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 535
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 543
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2115411120
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)