Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20271
(690 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_02_0700 + 13058446-13058790,13059352-13059582,13060083-130602... 110 9e-25
02_05_1126 - 34284733-34284810,34285151-34285291,34285424-342855... 45 7e-05
02_01_0754 - 5595813-5595887,5595973-5596071,5596136-5596327,559... 44 9e-05
06_03_0711 + 23798998-23799106,23799838-23799957,23800181-238003... 44 1e-04
06_01_0511 + 3688788-3688880,3689050-3689166,3689959-3690066,369... 43 2e-04
09_06_0271 + 21959213-21960559 42 6e-04
02_04_0562 - 23886272-23886357,23886456-23886571,23887045-238871... 36 0.030
04_04_0378 - 24822436-24822521,24822623-24822738,24823010-248230... 34 0.093
06_03_0668 + 23301578-23301791,23302102-23302199,23302233-233023... 33 0.16
03_02_0568 + 9514715-9514944,9515174-9515300,9515529-9515684,951... 33 0.16
06_01_0646 + 4678422-4678508,4679042-4679123,4679236-4679327,467... 33 0.21
02_05_0986 - 33334205-33334362,33334487-33334662,33334774-333349... 33 0.21
02_01_0789 - 5919271-5919411,5920105-5920215,5920303-5920401,592... 33 0.28
06_01_0801 - 5993726-5994160,5994811-5994969,5995071-5995211,599... 31 0.65
12_02_1062 - 25763269-25764141 29 2.6
12_01_0468 + 3661177-3661626 29 3.5
03_01_0555 + 4132630-4132923,4133514-4133771,4134125-4134249,413... 29 3.5
01_06_1535 + 38057802-38057999,38058338-38058437,38058730-380588... 29 3.5
01_05_0199 - 19174971-19175105,19176302-19176628,19176813-191769... 29 3.5
05_01_0553 + 4849535-4849553,4850727-4851913 28 6.1
08_02_1102 + 24319569-24319917,24320120-24321496,24321819-243220... 28 8.0
06_03_0902 - 25806912-25807190,25807876-25808094,25809469-258097... 28 8.0
04_01_0256 + 3402982-3402984,3403077-3403158,3403307-3403449,340... 28 8.0
03_05_0175 + 21513767-21513903,21534361-21535385,21537375-215375... 28 8.0
03_03_0168 - 15047383-15047847,15048085-15048192,15048313-150484... 28 8.0
>02_02_0700 +
13058446-13058790,13059352-13059582,13060083-13060241,
13060483-13060635,13061619-13061702,13061847-13061915,
13062374-13062421,13062487-13062621
Length = 407
Score = 110 bits (265), Expect = 9e-25
Identities = 50/62 (80%), Positives = 57/62 (91%)
Frame = +2
Query: 323 LEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPLVIGQFLEAVDQNTGIVGSTTGSN 502
+EF+E+QEEY+KDEQ+NLK+E L AQEEVKRIQSVPLVIGQF+E VD N GIVGSTTGSN
Sbjct: 1 MEFVEIQEEYVKDEQKNLKRELLRAQEEVKRIQSVPLVIGQFMEMVDGNNGIVGSTTGSN 60
Query: 503 YY 508
YY
Sbjct: 61 YY 62
Score = 89.8 bits (213), Expect = 2e-18
Identities = 43/51 (84%), Positives = 48/51 (94%)
Frame = +1
Query: 511 RILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSISMLQADEKPDVQY 663
RILSTI+RELLKPSASVALH+HSNALVDVLPPEADSSIS+L + EKP+V Y
Sbjct: 64 RILSTINRELLKPSASVALHRHSNALVDVLPPEADSSISLLGSSEKPNVTY 114
>02_05_1126 -
34284733-34284810,34285151-34285291,34285424-34285543,
34285787-34285874,34285962-34286080,34286437-34286628,
34286802-34286993,34287309-34287416,34287983-34288099,
34288214-34288315
Length = 418
Score = 44.8 bits (101), Expect = 7e-05
Identities = 19/50 (38%), Positives = 29/50 (58%)
Frame = +1
Query: 514 ILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSISMLQADEKPDVQY 663
++ +D E LKP V ++K S ++D LP E DS + ++ DEKP Y
Sbjct: 115 VIGLVDPEKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDY 164
>02_01_0754 -
5595813-5595887,5595973-5596071,5596136-5596327,
5596992-5597129,5597415-5597501,5597583-5597669,
5597795-5597956,5598089-5598225,5598483-5598602,
5600668-5600773
Length = 400
Score = 44.4 bits (100), Expect = 9e-05
Identities = 20/70 (28%), Positives = 40/70 (57%)
Frame = +2
Query: 296 TKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPLVIGQFLEAVDQNTG 475
T+Y+K LE + +++ +N KK++ ++++K +QSV +IG+ L +D
Sbjct: 17 TEYRKKLLNCRELESRVSTVRENLKNAKKDFTKTEDDLKSLQSVGQIIGEVLRPLDNERF 76
Query: 476 IVGSTTGSNY 505
IV +++G Y
Sbjct: 77 IVKASSGPRY 86
>06_03_0711 +
23798998-23799106,23799838-23799957,23800181-23800317,
23800418-23800579,23800707-23800793,23800872-23800958,
23801317-23801454,23802023-23802214,23802287-23802385,
23802490-23802564
Length = 401
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/70 (30%), Positives = 38/70 (54%)
Frame = +2
Query: 296 TKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPLVIGQFLEAVDQNTG 475
T Y+K LE + +D +N KK++ ++++K +QSV +IG+ L +D
Sbjct: 18 TDYRKKLLTCRELEARARTARDNLKNAKKDFGKTEDDLKSLQSVGQIIGEVLRPLDSERF 77
Query: 476 IVGSTTGSNY 505
IV +++G Y
Sbjct: 78 IVKASSGPRY 87
>06_01_0511 +
3688788-3688880,3689050-3689166,3689959-3690066,
3690634-3690825,3691010-3691201,3691484-3691602,
3691740-3691827,3692155-3692274,3692378-3692518,
3693065-3693142
Length = 415
Score = 43.2 bits (97), Expect = 2e-04
Identities = 18/50 (36%), Positives = 29/50 (58%)
Frame = +1
Query: 514 ILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSISMLQADEKPDVQY 663
++ +D + LKP V ++K S ++D LP E DS + ++ DEKP Y
Sbjct: 112 VVGLVDPDKLKPGDLVGVNKDSYLILDTLPSEYDSRVKAMEVDEKPTEDY 161
>09_06_0271 + 21959213-21960559
Length = 448
Score = 41.5 bits (93), Expect = 6e-04
Identities = 27/58 (46%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
Frame = +1
Query: 499 KLLFRILSTIDRELLKPSASVALHKHSNALVDVLPPE--ADSSISMLQAD-EKPDVQY 663
K+ + ++DR LLKPSA+VAL+ S ALV V P + A S+ L AD +KP V Y
Sbjct: 132 KMCVGVAGSLDRGLLKPSANVALNGRSLALVGVPPSDVAACSAARFLVADADKPGVAY 189
Score = 33.1 bits (72), Expect = 0.21
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = +2
Query: 269 DELESEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSV-PLVIGQ 445
D+ E L K + L+R L+ Q + + L++ +E V+R+ +V PLV+ Q
Sbjct: 52 DDEEGRQLREKLESLEREFCLLDEQRDNALFQIHVLEETVRFREELVRRLTAVTPLVVAQ 111
Query: 446 FLEAVDQNTGIV 481
E VD++ +V
Sbjct: 112 LDEVVDEHHAVV 123
>02_04_0562 -
23886272-23886357,23886456-23886571,23887045-23887127,
23887683-23887829,23887946-23887993,23888166-23888384,
23889370-23889541,23889636-23889700,23890386-23890512,
23891358-23891450,23891520-23891629,23891722-23891868,
23892161-23892473,23892580-23893178
Length = 774
Score = 35.9 bits (79), Expect = 0.030
Identities = 20/47 (42%), Positives = 31/47 (65%)
Frame = +2
Query: 275 LESEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKR 415
L SED ++ + R LEFLE+QEE IK+E++ +KE QE+ ++
Sbjct: 518 LPSEDSVSERR---RKLEFLEMQEELIKEEEKKKEKEEKAKQEKEEK 561
>04_04_0378 -
24822436-24822521,24822623-24822738,24823010-24823092,
24823772-24823918,24824004-24824051,24824153-24824353,
24824981-24825152,24825235-24825299,24825813-24825939,
24826436-24826528,24826608-24826696,24826804-24826950,
24827047-24827359,24827474-24828048
Length = 753
Score = 34.3 bits (75), Expect = 0.093
Identities = 19/37 (51%), Positives = 25/37 (67%)
Frame = +2
Query: 275 LESEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKE 385
L SED + K R LEFLE+QEE IK+E++ +KE
Sbjct: 503 LPSEDSVSDRK---RKLEFLEMQEELIKEEEKRQEKE 536
>06_03_0668 +
23301578-23301791,23302102-23302199,23302233-23302301,
23302674-23302961,23303045-23303208,23303344-23303599,
23303706-23303816,23304109-23304195,23305916-23305985,
23306093-23306149,23306309-23306426,23307314-23307403,
23307492-23307671,23307816-23307893,23308016-23308088
Length = 650
Score = 33.5 bits (73), Expect = 0.16
Identities = 17/55 (30%), Positives = 29/55 (52%)
Frame = +1
Query: 499 KLLFRILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSISMLQADEKPDVQY 663
K + + +ID L PS VAL S L +LP + D +++++ ++ PD Y
Sbjct: 133 KYVVDVDKSIDITKLSPSTRVALRNDSYMLHLILPSKVDPLVNLMKVEKVPDSTY 187
>03_02_0568 +
9514715-9514944,9515174-9515300,9515529-9515684,
9515765-9516102,9516191-9516329,9517083-9517152,
9517201-9517307,9517387-9517437,9517549-9517660,
9517783-9517869,9517958-9518133,9518479-9518586,
9518654-9518812,9518888-9518971,9519053-9519258,
9519565-9519666,9519768-9519877,9519963-9520114,
9520380-9520548,9520841-9520878,9521963-9522571,
9523314-9523784,9523786-9523871,9524396-9524906,
9525388-9525412,9526001-9526051,9526228-9526301,
9526412-9526534,9526667-9526738,9526924-9527020,
9527174-9527283
Length = 1649
Score = 33.5 bits (73), Expect = 0.16
Identities = 23/67 (34%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +2
Query: 218 MTKSQTQKAWRLRSSIFDELESEDLYTKYKKLQR-MLEFLEVQEEYIKDEQRNLKKEYLH 394
+TK KA R ++ I+ E L KK R +E+LE Q + +K + KKEYL
Sbjct: 359 ITKLSDVKAAREKNGIYIPQERFALEEAEKKTMRDKIEYLETQNKELKMNIESCKKEYLD 418
Query: 395 AQEEVKR 415
+E R
Sbjct: 419 LEEAHSR 425
>06_01_0646 +
4678422-4678508,4679042-4679123,4679236-4679327,
4679441-4679518,4679635-4679696,4680272-4680993,
4681115-4681272
Length = 426
Score = 33.1 bits (72), Expect = 0.21
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +1
Query: 598 LPPEADSSISMLQADEKPDVQY 663
LPP+ D S++M+ +EKPDV Y
Sbjct: 146 LPPKIDPSVTMMTVEEKPDVTY 167
>02_05_0986 -
33334205-33334362,33334487-33334662,33334774-33334955,
33335064-33335282,33335407-33335551,33336127-33336188,
33336282-33336359,33336517-33336608,33337086-33337167,
33337519-33337605
Length = 426
Score = 33.1 bits (72), Expect = 0.21
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +1
Query: 598 LPPEADSSISMLQADEKPDVQY 663
LPP+ D S++M+ +EKPDV Y
Sbjct: 146 LPPKIDPSVTMMTVEEKPDVTY 167
>02_01_0789 -
5919271-5919411,5920105-5920215,5920303-5920401,
5920486-5920642,5920774-5920937,5921017-5921079,
5921153-5921377,5922038-5922135,5923283-5923499
Length = 424
Score = 32.7 bits (71), Expect = 0.28
Identities = 17/55 (30%), Positives = 29/55 (52%)
Frame = +1
Query: 499 KLLFRILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSISMLQADEKPDVQY 663
K + I +ID + PS VAL S L +LP + D +++++ ++ PD Y
Sbjct: 111 KYVVDIDKSIDITKITPSTRVALRNDSYMLHLILPSKVDPLVNLMKVEKVPDSTY 165
>06_01_0801 -
5993726-5994160,5994811-5994969,5995071-5995211,
5995999-5996097,5996180-5996542,5996929-5997150,
5997257-5997448,5997997-5998056,5998162-5998378,
5998471-5998523,5999013-5999084,5999928-6000113,
6000986-6001132,6002902-6003075,6003149-6003300,
6004269-6004360,6004549-6004710,6004875-6005053,
6005173-6005304,6005454-6005507,6006082-6006191,
6006317-6006487,6006577-6006663,6008488-6008611,
6009355-6009564
Length = 1330
Score = 31.5 bits (68), Expect = 0.65
Identities = 37/109 (33%), Positives = 58/109 (53%), Gaps = 11/109 (10%)
Frame = +2
Query: 227 SQTQKAWRLRSSIFDELESEDLYT----KYKKLQ------RMLEFLEV-QEEYIKDEQRN 373
++ QKAWR+ S++ +L+SE+L + +K Q ++ LEV QE+ IK +R+
Sbjct: 532 NEVQKAWRVSSTLQADLKSENLMLAEKHRIEKEQNNQLRDQISRLLEVEQEQKIKMHERD 591
Query: 374 LKKEYLHAQEEVKRIQSVPLVIGQFLEAVDQNTGIVGSTTGSNYYSVFS 520
L + L Q ++K I+S Q EA+ N+ ST GS SV S
Sbjct: 592 LTIQSL--QAKLKSIES------QLNEAL--NSSDARSTIGSESASVIS 630
>12_02_1062 - 25763269-25764141
Length = 290
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/52 (30%), Positives = 27/52 (51%)
Frame = -2
Query: 650 GFSSACNIEIELSASGGKTSTRALECLCRATEADGFNNSLSIVERIRNNNLS 495
GFS +C I + + GG ST AL + + +A + S ++V+ N+ S
Sbjct: 39 GFSGSCPIMLSCNVDGGSNSTAAL--ILQGNDATTTDRSYTVVDGSFNSTAS 88
>12_01_0468 + 3661177-3661626
Length = 149
Score = 29.1 bits (62), Expect = 3.5
Identities = 19/69 (27%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Frame = +2
Query: 269 DELESEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEV-KRIQSVPLVIGQ 445
+E+E E+ + + ++ E E++EE +K+E+ L+++ A EEV + Q V+
Sbjct: 72 EEVEEEEDIEEEEVVEEEEE--EIEEEEVKEEEEELREQVQEAGEEVNEEQQGADGVVQS 129
Query: 446 FLEAVDQNT 472
L D N+
Sbjct: 130 MLMPTDINS 138
>03_01_0555 +
4132630-4132923,4133514-4133771,4134125-4134249,
4134789-4134990,4135172-4135297,4135404-4135660,
4135968-4136075,4136142-4136310,4136378-4136543,
4136967-4136998,4137256-4137579,4137683-4137757,
4138093-4138162,4138228-4138385,4138872-4139021
Length = 837
Score = 29.1 bits (62), Expect = 3.5
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = -2
Query: 653 SGFSSACNIEIELSASGGKTSTRALECLCRATEADGFNNSLSIVE 519
SGF+ +E+++ S G ++ LECL + +G N + SI+E
Sbjct: 326 SGFTQLQELEVDIPGSLGNSAISILECLPNLSLLNGINVA-SIIE 369
>01_06_1535 +
38057802-38057999,38058338-38058437,38058730-38058890,
38059166-38059363,38059442-38059534,38059732-38059854,
38060637-38060884,38061004-38061175,38061407-38061493,
38061523-38061786,38062415-38062577,38062839-38062926,
38063010-38063079,38063566-38063694,38063773-38063811,
38065539-38065760,38065935-38065999,38066095-38066288,
38066539-38066805,38066908-38066995,38067091-38067216,
38067291-38067400,38067523-38067671
Length = 1117
Score = 29.1 bits (62), Expect = 3.5
Identities = 18/84 (21%), Positives = 42/84 (50%)
Frame = +2
Query: 287 DLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPLVIGQFLEAVDQ 466
++ ++ K+L+ LEF ++ ++ + E K+ A E+KR++ + I + + + +
Sbjct: 385 EVTSQLKELKVALEFADLSKQRAEGEATLAKERAESATREIKRLELLLAAISEERDRLRK 444
Query: 467 NTGIVGSTTGSNYYSVFSQQLIEN 538
+ + S G + S F +I N
Sbjct: 445 DHAVSKSRDGDDASSKFCAFIILN 468
>01_05_0199 -
19174971-19175105,19176302-19176628,19176813-19176915,
19178852-19178916,19179941-19180048,19180213-19180305,
19180395-19180442,19180801-19180899,19180980-19181096,
19181186-19181239,19181312-19181404,19181776-19181881,
19182050-19182084,19182173-19182259,19182385-19182462,
19182528-19182596,19182682-19182780,19183644-19183685,
19184498-19184570,19184654-19184982,19185070-19185127,
19185217-19185269,19186075-19186144,19186276-19186337,
19186452-19186540,19186906-19187011,19187110-19187178,
19187295-19187330
Length = 900
Score = 29.1 bits (62), Expect = 3.5
Identities = 22/85 (25%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Frame = +2
Query: 164 FS*L*KQWKRLELFYPRKMT-KSQTQKAWRLRSSIFDELESEDLYTKYKKLQRMLEFLEV 340
FS + + +R +LF M + +T WR + + LE ++ ++ +K+ R LE+
Sbjct: 464 FSAVERPREREDLFESYLMELQKKTSTQWR---KVQERLEDDERCSRLEKIDR----LEI 516
Query: 341 QEEYIKDEQRNLKKEYLHAQEEVKR 415
+EYI+D ++ ++ +E+V+R
Sbjct: 517 FQEYIRDLEKEEEEHKRIHKEQVRR 541
>05_01_0553 + 4849535-4849553,4850727-4851913
Length = 401
Score = 28.3 bits (60), Expect = 6.1
Identities = 17/66 (25%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = +2
Query: 230 QTQKAWRLRSSIFDELE-SEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEE 406
+ +++ L+S + E E +E L YK+ + LEV +++ L K YL +E+
Sbjct: 306 EKERSHELKSELAKEREKNEALVQLYKQTKESHANLEVANAQLQERVDGLDKAYLTLEEK 365
Query: 407 VKRIQS 424
K +++
Sbjct: 366 FKTLKN 371
>08_02_1102 +
24319569-24319917,24320120-24321496,24321819-24322001,
24322147-24322460,24322515-24322631,24323057-24323313,
24323504-24323684,24323802-24324074,24324535-24324729
Length = 1081
Score = 27.9 bits (59), Expect = 8.0
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = -2
Query: 317 FGVSCTLCINLQIRVHQRLRTANA 246
FGV C+L + + I VH +LR++ A
Sbjct: 507 FGVLCSLFVTIYIAVHVQLRSSGA 530
>06_03_0902 -
25806912-25807190,25807876-25808094,25809469-25809711,
25809810-25809974,25810141-25810721,25810940-25811048,
25811158-25811250,25811474-25811535,25811895-25811967,
25812879-25813007,25814107-25814229
Length = 691
Score = 27.9 bits (59), Expect = 8.0
Identities = 16/61 (26%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
Frame = +2
Query: 278 ESEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNL--KKEYLHAQEEVKR--IQSVPLVIGQ 445
+ ++LY KY +++ L+ + ++ ++ E+ +KE L + E KR ++S+ IG+
Sbjct: 426 DKDELYRKYSEMESNLKIEQNEKTRVQSEKTTASGEKEMLLEELETKRKEVESLQQHIGE 485
Query: 446 F 448
F
Sbjct: 486 F 486
>04_01_0256 +
3402982-3402984,3403077-3403158,3403307-3403449,
3403557-3403832,3404136-3404315
Length = 227
Score = 27.9 bits (59), Expect = 8.0
Identities = 16/60 (26%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Frame = +2
Query: 248 RLRSSIFDELESE-DLYTK-YKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQ 421
++ S I D+++ E + Y K ++++R E L+++ ++E++ L+ + A+EE KR++
Sbjct: 70 KIESVIPDDVKEEIERYKKDLERMKRQKEDLDIKLREKREEKKVLQADKTAAEEEQKRLK 129
>03_05_0175 +
21513767-21513903,21534361-21535385,21537375-21537547,
21537849-21538679
Length = 721
Score = 27.9 bits (59), Expect = 8.0
Identities = 15/52 (28%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Frame = +2
Query: 269 DELESEDLYTKYK-KLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQ 421
+E+E E++ + + + + + E +E +EE I++E+ +++E A EEV Q
Sbjct: 56 EEVEEEEVEEEEEIEEEEVEEEIEEEEEEIEEEEEEVREEVQEAGEEVDEEQ 107
>03_03_0168 -
15047383-15047847,15048085-15048192,15048313-15048464,
15048555-15048752,15049553-15050856,15051281-15051354,
15051458-15051492,15052853-15053015
Length = 832
Score = 27.9 bits (59), Expect = 8.0
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Frame = +2
Query: 245 WRLRSSIFDELESEDLYTKYKK---LQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKR 415
WR+ + + DEL L K K ++R+ E ++ ++E ++EQ N E A +
Sbjct: 96 WRV-TDLKDELRKRRLPVKGLKDELVRRLFESIQSEKEEEEEEQDNETVEVNPAANQASE 154
Query: 416 IQSV 427
IQSV
Sbjct: 155 IQSV 158
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,852,275
Number of Sequences: 37544
Number of extensions: 292712
Number of successful extensions: 852
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 819
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 850
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1756684372
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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