Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20271
(690 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_33442| Best HMM Match : AAA (HMM E-Value=0) 141 4e-34
SB_33584| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 1e-06
SB_35973| Best HMM Match : zf-CCHC (HMM E-Value=0.0026) 39 0.003
SB_19407| Best HMM Match : SURF6 (HMM E-Value=0.43) 34 0.094
SB_9909| Best HMM Match : AAA (HMM E-Value=0) 34 0.094
SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30) 31 0.88
SB_32179| Best HMM Match : DUF1409 (HMM E-Value=0.071) 31 0.88
SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0) 31 1.2
SB_17310| Best HMM Match : Filament (HMM E-Value=0.31) 30 2.0
SB_17390| Best HMM Match : Exo_endo_phos (HMM E-Value=3.1e-13) 29 2.7
SB_55825| Best HMM Match : Arch_fla_DE (HMM E-Value=2.9) 29 2.7
SB_29903| Best HMM Match : SAP (HMM E-Value=2.2e-11) 29 2.7
SB_8000| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_7001| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_31987| Best HMM Match : Troponin (HMM E-Value=7.1) 29 3.6
SB_14841| Best HMM Match : RVT_1 (HMM E-Value=0) 29 3.6
SB_33753| Best HMM Match : bZIP_Maf (HMM E-Value=2.3) 29 4.7
SB_1305| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.8e-11) 29 4.7
SB_30701| Best HMM Match : Lipase_GDSL (HMM E-Value=0.022) 29 4.7
SB_50799| Best HMM Match : I-set (HMM E-Value=0) 28 6.2
SB_59689| Best HMM Match : Pkinase (HMM E-Value=0.007) 28 8.2
SB_29470| Best HMM Match : Glyco_transf_10 (HMM E-Value=9.1e-39) 28 8.2
>SB_33442| Best HMM Match : AAA (HMM E-Value=0)
Length = 369
Score = 141 bits (342), Expect = 4e-34
Identities = 67/77 (87%), Positives = 71/77 (92%)
Frame = +2
Query: 278 ESEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPLVIGQFLEA 457
E +DLY YKKL++ LEFLEVQEEYIKDEQ+NLKKE LHAQEEVKRIQSVPLVIGQFLEA
Sbjct: 35 EMDDLYITYKKLEKQLEFLEVQEEYIKDEQKNLKKELLHAQEEVKRIQSVPLVIGQFLEA 94
Query: 458 VDQNTGIVGSTTGSNYY 508
VDQNTGIV STTGSNYY
Sbjct: 95 VDQNTGIVASTTGSNYY 111
Score = 91.9 bits (218), Expect = 4e-19
Identities = 43/51 (84%), Positives = 48/51 (94%)
Frame = +1
Query: 511 RILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSISMLQADEKPDVQY 663
RILSTID+ELLKPSASVALHKHSNALVD+LPPEADSSI+ML +EKP+V Y
Sbjct: 113 RILSTIDKELLKPSASVALHKHSNALVDILPPEADSSIAMLTNEEKPNVSY 163
>SB_33584| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 455
Score = 50.8 bits (116), Expect = 1e-06
Identities = 24/72 (33%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Frame = +2
Query: 299 KYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQE--EVKRIQSVPLVIGQFLEAVDQNT 472
K KL R+ +FL ++EE+I++++R +E H +E +V ++ P+ +G E +D N
Sbjct: 256 KLLKLDRIKDFLLMEEEFIQNQERLKPQEEKHEEERSKVDDLRGTPMSVGNLEEIIDDNH 315
Query: 473 GIVGSTTGSNYY 508
IV ++ GS +Y
Sbjct: 316 AIVSTSVGSEHY 327
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/50 (34%), Positives = 33/50 (66%)
Frame = +1
Query: 514 ILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSISMLQADEKPDVQY 663
ILS +D++LL+P +V L+ +A+V VL +AD +++++ ++ P Y
Sbjct: 330 ILSFVDKDLLEPGCTVLLNHKVHAVVGVLSDDADPMVTVMKLEKAPQESY 379
>SB_35973| Best HMM Match : zf-CCHC (HMM E-Value=0.0026)
Length = 779
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/74 (25%), Positives = 41/74 (55%)
Frame = +2
Query: 284 EDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPLVIGQFLEAVD 463
E +YKK L+ + + ++++ ++ KEY ++ ++K +QSV ++G+ L+ +
Sbjct: 8 EKALLEYKKKLLEHRELDARLKEMREQLKDFTKEYDKSENDLKALQSVGQIVGEVLKQLT 67
Query: 464 QNTGIVGSTTGSNY 505
+ IV +T G Y
Sbjct: 68 EEKFIVKATNGPRY 81
>SB_19407| Best HMM Match : SURF6 (HMM E-Value=0.43)
Length = 443
Score = 34.3 bits (75), Expect = 0.094
Identities = 17/57 (29%), Positives = 32/57 (56%)
Frame = +2
Query: 209 PRKMTKSQTQKAWRLRSSIFDELESEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLK 379
P++ K + QK WRLR+ + L++ ++ K +K Q + E ++++E K R K
Sbjct: 366 PKRSQKRRVQKIWRLRAGV---LQAAEMKKKRQKAQSLAERKKIKKEKKKSNPRRSK 419
>SB_9909| Best HMM Match : AAA (HMM E-Value=0)
Length = 400
Score = 34.3 bits (75), Expect = 0.094
Identities = 12/22 (54%), Positives = 18/22 (81%)
Frame = +1
Query: 598 LPPEADSSISMLQADEKPDVQY 663
LPP+ D +++M+Q +EKPDV Y
Sbjct: 62 LPPKIDPTVTMMQVEEKPDVTY 83
>SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30)
Length = 3071
Score = 31.1 bits (67), Expect = 0.88
Identities = 12/49 (24%), Positives = 30/49 (61%)
Frame = +2
Query: 278 ESEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQS 424
E++ L + + R L +LE + E ++ E+ LKK++ ++++E +++
Sbjct: 1867 ENDRLQNEISAINRKLVYLETRNENLESEKDRLKKDFANSKKESAELRA 1915
>SB_32179| Best HMM Match : DUF1409 (HMM E-Value=0.071)
Length = 429
Score = 31.1 bits (67), Expect = 0.88
Identities = 15/45 (33%), Positives = 27/45 (60%)
Frame = +2
Query: 299 KYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPL 433
+Y+ Q ++F +V+EE K +Q N+K A+EE +R +S +
Sbjct: 148 EYENKQLRMDFEKVEEEVEKWKQNNMKLTATRAREEQQRAKSTAM 192
>SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0)
Length = 2858
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 281 SEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQS 424
+++L + ++ LE L+ Q IKDE NLK+ Q+E+ +++
Sbjct: 1347 TDNLQASKEYIEGQLESLKAQMSKIKDENENLKESDARRQQEILDLEN 1394
>SB_17310| Best HMM Match : Filament (HMM E-Value=0.31)
Length = 458
Score = 29.9 bits (64), Expect = 2.0
Identities = 21/84 (25%), Positives = 45/84 (53%), Gaps = 6/84 (7%)
Frame = +2
Query: 191 RLELFYPRKMTKSQTQKAWRLRS------SIFDELESEDLYTKYKKLQRMLEFLEVQEEY 352
++EL + R+ T+ Q+ WRL + ++ + LE+E T + + + ++EE+
Sbjct: 211 KMEL-HLREQTRQLDQEKWRLSAEEARVKTLQNSLETERRMTMEQLAEERADVQRLREEF 269
Query: 353 IKDEQRNLKKEYLHAQEEVKRIQS 424
++++QR LH QEE + + +
Sbjct: 270 MREQQR----VTLHLQEEKRALST 289
>SB_17390| Best HMM Match : Exo_endo_phos (HMM E-Value=3.1e-13)
Length = 851
Score = 29.5 bits (63), Expect = 2.7
Identities = 19/81 (23%), Positives = 39/81 (48%)
Frame = +2
Query: 209 PRKMTKSQTQKAWRLRSSIFDELESEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEY 388
P ++T + + D LE +DLY ++ QR+ E + Y+++E R +K +
Sbjct: 17 PEELTSTNYVSLKKFNDLERDVLELKDLYKSFQSAQRLKE----ENGYLREELRLIKSDM 72
Query: 389 LHAQEEVKRIQSVPLVIGQFL 451
+EE ++ V ++ + L
Sbjct: 73 DKIREERDSLKLVVSMLSKDL 93
>SB_55825| Best HMM Match : Arch_fla_DE (HMM E-Value=2.9)
Length = 208
Score = 29.5 bits (63), Expect = 2.7
Identities = 14/58 (24%), Positives = 32/58 (55%)
Frame = +2
Query: 311 LQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPLVIGQFLEAVDQNTGIVG 484
+Q + E ++ E+ + + + KE+ + V+ + V+GQ +++VD+ G+VG
Sbjct: 2 VQSIDEKVQDAEQKVTKGFQEVGKEFQVVGQHVQSVDEKVGVVGQHVQSVDEKVGVVG 59
>SB_29903| Best HMM Match : SAP (HMM E-Value=2.2e-11)
Length = 510
Score = 29.5 bits (63), Expect = 2.7
Identities = 19/81 (23%), Positives = 39/81 (48%)
Frame = +2
Query: 209 PRKMTKSQTQKAWRLRSSIFDELESEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEY 388
P ++T + + D LE +DLY ++ QR+ E + Y+++E R +K +
Sbjct: 151 PEELTSTNYVSLKKFNDLERDVLELKDLYKSFQSAQRLKE----ENGYLREELRLIKSDM 206
Query: 389 LHAQEEVKRIQSVPLVIGQFL 451
+EE ++ V ++ + L
Sbjct: 207 DKIREERDSLKLVVSMLSKDL 227
>SB_8000| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 937
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/64 (26%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +2
Query: 305 KKLQRMLEFLEVQEEYIKDEQRNLKKEYLH--AQEEVKRIQSVPLVIGQFLEAVDQNTGI 478
KK+ +LE + + + I +E + +KK H + K++ + +E+V++N G+
Sbjct: 188 KKMAEILEEIGISPDRIHEESQQIKKPSFHDCTNKPAKKMTPRSVSSPSMMESVNEN-GL 246
Query: 479 VGST 490
GST
Sbjct: 247 PGST 250
>SB_7001| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 139
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Frame = -2
Query: 635 CNIEIELSASGGKTSTRALECLCRATEA--DGFNNSLSIVERIRN 507
CNI+IE GG TS+RA A + + NSL++V + R+
Sbjct: 22 CNIQIEFLQPGGSTSSRASATAVELQFALYESYYNSLAVVLQRRD 66
>SB_31987| Best HMM Match : Troponin (HMM E-Value=7.1)
Length = 235
Score = 29.1 bits (62), Expect = 3.6
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +2
Query: 356 KDEQRNLKKEYLHAQEEVKRIQSVPLVIGQFLEAVDQNTGIV 481
+DE+R+ KE + +V+R++S V FL QN GIV
Sbjct: 41 QDEERDSVKEKNRQRSDVERLRSTYHVSESFLAMDKQNEGIV 82
>SB_14841| Best HMM Match : RVT_1 (HMM E-Value=0)
Length = 1821
Score = 29.1 bits (62), Expect = 3.6
Identities = 19/81 (23%), Positives = 39/81 (48%)
Frame = +2
Query: 209 PRKMTKSQTQKAWRLRSSIFDELESEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEY 388
P ++T + + D LE +DLY ++ QR+ E + Y+++E R +K +
Sbjct: 151 PEELTSTNYVPLKKFNDLERDVLELKDLYKSFQSAQRLKE----ENGYLREELRLIKSDM 206
Query: 389 LHAQEEVKRIQSVPLVIGQFL 451
+EE ++ V ++ + L
Sbjct: 207 DKIREERDSLKLVVSMLSKDL 227
>SB_33753| Best HMM Match : bZIP_Maf (HMM E-Value=2.3)
Length = 223
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +2
Query: 269 DELESEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEE 406
D LE +DLY ++ QR+ E + Y+++E R +K + +EE
Sbjct: 8 DVLELKDLYKSFQSAQRLKE----ENGYLREELRLIKSDMDQIREE 49
>SB_1305| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.8e-11)
Length = 1491
Score = 28.7 bits (61), Expect = 4.7
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Frame = +2
Query: 218 MTKSQTQKAWRLRSSIFDELESE--DLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYL 391
M K +T++ L I +EL+ E D+ T+ +LQ+ E + + + + D LKKE
Sbjct: 563 MAKEKTRRR-ELEKKI-EELQDELDDVSTRRNELQKKQEKIIKENDELNDRINELKKEND 620
Query: 392 HAQEEVK 412
+ +E+K
Sbjct: 621 YLAKEIK 627
>SB_30701| Best HMM Match : Lipase_GDSL (HMM E-Value=0.022)
Length = 297
Score = 28.7 bits (61), Expect = 4.7
Identities = 17/61 (27%), Positives = 33/61 (54%)
Frame = +2
Query: 269 DELESEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPLVIGQF 448
D LE +DLY ++ QR+ E + Y+++E R +K + +EE ++ V ++ +
Sbjct: 8 DVLELKDLYKSFQSAQRLKE----ENGYLREELRLIKSDMDKIREERDSLKLVVSMLSKD 63
Query: 449 L 451
L
Sbjct: 64 L 64
>SB_50799| Best HMM Match : I-set (HMM E-Value=0)
Length = 1195
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = -2
Query: 251 NAKPFESVTWSSFSGKIIPISSIVSIAKRIRVL 153
N KP VTWS G IP +S+ RV+
Sbjct: 266 NGKPPPRVTWSKVGGASIPFVQSLSVNDNFRVV 298
>SB_59689| Best HMM Match : Pkinase (HMM E-Value=0.007)
Length = 881
Score = 27.9 bits (59), Expect = 8.2
Identities = 18/66 (27%), Positives = 32/66 (48%)
Frame = +2
Query: 209 PRKMTKSQTQKAWRLRSSIFDELESEDLYTKYKKLQRMLEFLEVQEEYIKDEQRNLKKEY 388
P+K+T + ++ R R +E+E K +KLQ+ E + + E +DE +K
Sbjct: 629 PQKITSEEQKQKERNRQKHREEMER-----KREKLQKERELKKAKREKERDENEKARKTL 683
Query: 389 LHAQEE 406
L +E
Sbjct: 684 LELAKE 689
>SB_29470| Best HMM Match : Glyco_transf_10 (HMM E-Value=9.1e-39)
Length = 426
Score = 27.9 bits (59), Expect = 8.2
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = -1
Query: 471 VF*STASRNCPMTRGTDCMRFTSSCACKYSFFKFRCS 361
VF SR + GT C RFT C +KFR S
Sbjct: 260 VFGGCRSRFPKHSEGTSCRRFTKECDNLMRRYKFRLS 296
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,076,419
Number of Sequences: 59808
Number of extensions: 370482
Number of successful extensions: 1227
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1094
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1221
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1793485733
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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