Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20268
         (518 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory pro...    25   0.53 
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    24   0.70 
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    21   6.5  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    21   6.5  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           21   6.5  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   8.7  
AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein p...    21   8.7  
AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein p...    21   8.7  

>DQ855488-1|ABH88175.1|  112|Tribolium castaneum chemosensory
           protein 1 protein.
          Length = 112

 Score = 24.6 bits (51), Expect = 0.53
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +3

Query: 327 QRRCRSGESPPEPLGR 374
           Q +C +GE+P +P+GR
Sbjct: 48  QLKCATGEAPCDPVGR 63


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 24.2 bits (50), Expect = 0.70
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = -1

Query: 284 WLESNFSIPSIKTSGSSQWRRLQQTEAQSFHW 189
           WL+SN S+   + + S Q      T+  SF++
Sbjct: 13  WLKSNSSLAGFEVNSSEQLTTPTPTDINSFYF 44


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 7/24 (29%), Positives = 13/24 (54%)
 Frame = -1

Query: 239 SSQWRRLQQTEAQSFHWCRRHGDS 168
           S++   + +  A  + W + HGDS
Sbjct: 155 SAEENSVSEPPANFYPWMKAHGDS 178


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 7/24 (29%), Positives = 13/24 (54%)
 Frame = -1

Query: 239 SSQWRRLQQTEAQSFHWCRRHGDS 168
           S++   + +  A  + W + HGDS
Sbjct: 155 SAEENSVSEPPANFYPWMKAHGDS 178


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 7/24 (29%), Positives = 13/24 (54%)
 Frame = -1

Query: 239 SSQWRRLQQTEAQSFHWCRRHGDS 168
           S++   + +  A  + W + HGDS
Sbjct: 155 SAEENSVSEPPANFYPWMKAHGDS 178


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +3

Query: 327 QRRCRSGESPPEPLGRS 377
           ++R + G  PPEP+  S
Sbjct: 309 KKRMKEGLIPPEPISAS 325


>AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +3

Query: 327 QRRCRSGESPPEPLGRS 377
           ++R + G  PPEP+  S
Sbjct: 98  KKRMKEGLIPPEPISAS 114


>AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +3

Query: 327 QRRCRSGESPPEPLGRS 377
           ++R + G  PPEP+  S
Sbjct: 98  KKRMKEGLIPPEPISAS 114


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,362
Number of Sequences: 336
Number of extensions: 2153
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12468463
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)