Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20268
(518 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_1016 + 13228113-13228964 32 0.32
09_02_0057 - 3697255-3698116,3698191-3698351,3698442-3698636,369... 31 0.73
06_02_0203 + 12986685-12988691 30 0.97
07_03_1577 - 27869596-27869682,27869769-27869869,27869956-278699... 30 1.3
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 29 1.7
09_04_0329 + 16726501-16726750,16726843-16726930,16727280-167273... 29 1.7
05_07_0354 - 29507068-29507170,29507406-29507431,29508264-295083... 29 1.7
09_02_0479 - 9753161-9753171,9755260-9755547,9755883-9756222 29 2.2
04_04_1188 + 31579833-31579914,31580001-31580176,31580822-315809... 29 2.2
01_01_0829 + 6471032-6471870,6472490-6472685,6472772-6472956,647... 29 2.2
08_02_0733 + 20546072-20546325,20546924-20547017,20547441-205476... 29 3.0
01_06_0241 - 27813076-27813622,27813695-27814125 29 3.0
02_03_0172 + 15965342-15965711,15967757-15967849,15967976-159680... 28 3.9
11_06_0021 + 19314211-19314311,19315202-19315307,19317135-193174... 28 5.2
09_04_0087 + 14476539-14476675,14478876-14479635,14479720-144798... 28 5.2
08_01_0434 + 3809681-3810016,3810039-3811100 28 5.2
04_04_0057 + 22410167-22411330 28 5.2
03_05_0070 - 20478396-20478505,20478605-20478780,20481162-204812... 28 5.2
02_03_0171 + 15945591-15945681,15947068-15947138,15947715-159478... 28 5.2
12_01_0433 - 3402250-3402536,3402644-3403030,3403523-3403957,340... 27 9.0
12_01_0377 - 2939384-2939505,2939629-2939695,2940324-2940543,294... 27 9.0
08_02_0259 - 14974526-14974572,14974670-14974742,14974829-149748... 27 9.0
07_03_0697 + 20759176-20759817,20760592-20760708,20761422-207616... 27 9.0
06_03_0723 + 23875008-23875204,23875311-23875576,23877166-238772... 27 9.0
04_04_1085 - 30719921-30719960,30720206-30720351,30720469-307205... 27 9.0
01_05_0160 + 18751512-18751960,18752082-18752553 27 9.0
>03_02_1016 + 13228113-13228964
Length = 283
Score = 31.9 bits (69), Expect = 0.32
Identities = 18/45 (40%), Positives = 21/45 (46%)
Frame = +3
Query: 279 EPAEAHRDSGEEPASGQRRCRSGESPPEPLGRS*TLRQDSDEAHD 413
E A AH +G + A+ RRC SG P P RS T HD
Sbjct: 214 EAARAHASNGGKHAAA-RRCSSGNHQPVPRARSTTGMDSLGHGHD 257
>09_02_0057 -
3697255-3698116,3698191-3698351,3698442-3698636,
3698728-3699126,3699208-3699477,3700102-3700695
Length = 826
Score = 30.7 bits (66), Expect = 0.73
Identities = 24/83 (28%), Positives = 31/83 (37%), Gaps = 7/83 (8%)
Frame = +3
Query: 279 EPAEAHRDSGEEPASGQRRCRSGESPPEPLGR----S*TLRQDSDEAHDDGRKESTAPDR 446
E R G G+R ESPP P + S +DS E D +E+ P
Sbjct: 60 EEESRSRRHGHHRDGGRRSLSPSESPPPPAAKRERSSSRAPRDSVERRDSADREAPPPSS 119
Query: 447 SYRSGE---GKEQIPERHRELRS 506
R G G E PE + R+
Sbjct: 120 RKRKGHEGGGNESDPEGGKRARA 142
>06_02_0203 + 12986685-12988691
Length = 668
Score = 30.3 bits (65), Expect = 0.97
Identities = 14/34 (41%), Positives = 21/34 (61%)
Frame = +1
Query: 316 PLPDKDVVAAEKAHQNLLDGVEHFDKTQMKHTTT 417
P+P+ + +AA++AH N G EH K + TTT
Sbjct: 505 PVPNSNAIAADEAHGNATAG-EHDKKETAEQTTT 537
>07_03_1577 -
27869596-27869682,27869769-27869869,27869956-27869995,
27870879-27870953
Length = 100
Score = 29.9 bits (64), Expect = 1.3
Identities = 10/25 (40%), Positives = 19/25 (76%)
Frame = +2
Query: 134 DLKSQLEGFNTSCLRDVDTNEKIVL 208
DL+S+L+ NT CL + + N+K+++
Sbjct: 54 DLQSKLDAVNTECLAEKEKNKKLII 78
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 29.5 bits (63), Expect = 1.7
Identities = 21/63 (33%), Positives = 28/63 (44%)
Frame = +3
Query: 12 PTESLSARIFYPLPHQKYIDSEWPAP*VTLPP*KTSPRSPQT*RVSSKASTPAVSVTSTP 191
P SL R+ P P I +++PAP PP ++S R+P SSK P P
Sbjct: 641 PPPSLPNRLVPP-PPAPGIGNKFPAPPPPPPPPRSSSRTPTGAATSSKGPPPPPPPPLPP 699
Query: 192 MKR 200
R
Sbjct: 700 ANR 702
>09_04_0329 +
16726501-16726750,16726843-16726930,16727280-16727333,
16727590-16727739,16727884-16728015,16728279-16728423,
16728514-16728552,16728638-16728712,16728935-16728994,
16729120-16729184,16729519-16729609,16729806-16729820
Length = 387
Score = 29.5 bits (63), Expect = 1.7
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -2
Query: 373 RPRGSGGLSPLRQRLCPEAGSSPESRCASAG 281
R RG+ G+ LR L P A +SP ++ A+ G
Sbjct: 54 RRRGAHGVRALRPLLLPRASASPSAKTAAGG 84
>05_07_0354 -
29507068-29507170,29507406-29507431,29508264-29508301,
29508722-29508825,29509005-29509024,29509251-29509299,
29510319-29510406,29510463-29510562,29510660-29510737,
29512688-29512804,29513718-29513821,29514497-29514569,
29514904-29514981,29515091-29515215,29515278-29515341,
29515439-29515597,29515950-29516048,29516496-29516624,
29517010-29517075,29517160-29517304,29517379-29517500,
29517683-29517838,29517918-29518029,29518891-29519036,
29519148-29519252,29519391-29519540,29519703-29519776,
29519902-29520055,29520142-29520408
Length = 1016
Score = 29.5 bits (63), Expect = 1.7
Identities = 14/53 (26%), Positives = 25/53 (47%)
Frame = +1
Query: 268 KFDSSQLKHTETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDKTQMKHTTTEEK 426
K+D + ++ E QEK K + K ++ VE K +M HT+ ++
Sbjct: 262 KYDMKKKEYKEAQEKEKTEKKKMEEVAKIWEDSKGPVEELKKKKMSHTSNTKR 314
>09_02_0479 - 9753161-9753171,9755260-9755547,9755883-9756222
Length = 212
Score = 29.1 bits (62), Expect = 2.2
Identities = 11/24 (45%), Positives = 19/24 (79%)
Frame = +3
Query: 141 RVSSKASTPAVSVTSTPMKRLCFR 212
+VSS++S+P SVT+ ++ +CFR
Sbjct: 72 QVSSQSSSPVESVTTATLRPICFR 95
>04_04_1188 +
31579833-31579914,31580001-31580176,31580822-31580923,
31581015-31581245,31581821-31581922,31582092-31582184,
31582275-31582379,31582455-31582514,31582621-31582698,
31582778-31582924,31583011-31583109,31583178-31583267,
31583360-31583451,31583529-31583646,31583783-31583871,
31583998-31584088,31584203-31584294,31584442-31584749,
31584866-31584897
Length = 728
Score = 29.1 bits (62), Expect = 2.2
Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 2/64 (3%)
Frame = +3
Query: 288 EAHRDSGEEPASGQRR--CRSGESPPEPLGRS*TLRQDSDEAHDDGRKESTAPDRSYRSG 461
E+ +SG+EP + + SG + P P + D + DD ES+ D +
Sbjct: 328 ESSEESGDEPPQKKIKDSTTSGTTKPSPKATKKEISSDDESDEDDSSDESSDEDVKQKQT 387
Query: 462 EGKE 473
+ K+
Sbjct: 388 QAKK 391
>01_01_0829 +
6471032-6471870,6472490-6472685,6472772-6472956,
6473206-6473539,6473629-6473833,6474927-6475033,
6475117-6475269
Length = 672
Score = 29.1 bits (62), Expect = 2.2
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = +3
Query: 96 TLPP*KTSPRSPQT*RVSSKASTPAVSVTST 188
TLPP + SP SP T SSK TP+ S S+
Sbjct: 31 TLPPGRLSPVSPLTHSSSSKLPTPSSSSGSS 61
>08_02_0733 +
20546072-20546325,20546924-20547017,20547441-20547624,
20547722-20547831,20548328-20548423,20548525-20548679,
20548743-20548986,20549159-20549314,20549600-20549829,
20552213-20552316,20552420-20552505,20552776-20553066,
20553383-20553475,20553640-20553735,20553838-20553939,
20554196-20554266,20554784-20555035,20555786-20556529,
20557038-20557119,20557192-20557347,20557446-20557655,
20558282-20558665
Length = 1397
Score = 28.7 bits (61), Expect = 3.0
Identities = 17/57 (29%), Positives = 26/57 (45%)
Frame = +2
Query: 104 SLKDLPKVATDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATEKTQKSLSTVSRSL 274
+L D A + L F T L D + +KI LP+ D E+ + T+SR +
Sbjct: 153 TLLDRQPSAELARGHLRTFFTDYLSDFNAGKKIQLPTFRDCLKERGTVQMLTISREV 209
>01_06_0241 - 27813076-27813622,27813695-27814125
Length = 325
Score = 28.7 bits (61), Expect = 3.0
Identities = 11/41 (26%), Positives = 22/41 (53%)
Frame = +3
Query: 387 RQDSDEAHDDGRKESTAPDRSYRSGEGKEQIPERHRELRSH 509
R + + H+ ++S +RS+R+ ++ + HR RSH
Sbjct: 21 RVEPEANHESANQQSHHSNRSHRTASRNAEVEQPHRSNRSH 61
>02_03_0172 +
15965342-15965711,15967757-15967849,15967976-15968060,
15968749-15968824,15968992-15969120,15969473-15969571,
15969661-15969762,15970257-15970415,15970507-15970602,
15971497-15971647,15971782-15971893,15972004-15972074,
15972548-15972984,15973421-15973492,15973713-15973810,
15974350-15974425,15975512-15975634,15975776-15975844
Length = 805
Score = 28.3 bits (60), Expect = 3.9
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +3
Query: 354 PPEPLGRS*TLRQDSDEAHDDGRKESTAPDRSYRSGEGKEQIPER 488
PP P GR RQ + DG+ + D S RS +G P++
Sbjct: 89 PPPPRGRRRVTRQFWNAGDYDGKPDLLGGDPSLRSDDGGGMDPDK 133
>11_06_0021 +
19314211-19314311,19315202-19315307,19317135-19317412,
19318587-19318692,19318812-19319159,19319237-19319313,
19319392-19319516,19319884-19320135,19320314-19320336
Length = 471
Score = 27.9 bits (59), Expect = 5.2
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +3
Query: 288 EAHRDSGEEPASGQRRCRSGESPPEPLGRS*TLRQDSDE 404
E+H+DSG++ + +R R +S + S R DSDE
Sbjct: 213 ESHKDSGQKTSKNSKRARQ-DSDTSEINDSHCERGDSDE 250
>09_04_0087 +
14476539-14476675,14478876-14479635,14479720-14479871,
14479958-14480024,14480632-14480831,14480915-14481068,
14481585-14481669,14481766-14481857,14482575-14482766,
14482867-14482992,14483072-14483125,14483494-14483550,
14484509-14484606,14484703-14485038,14485116-14485203,
14486891-14487016,14487082-14487138,14488054-14488133,
14488228-14488270,14488948-14489034,14489331-14489420,
14489996-14490054,14490141-14490231,14490330-14490495,
14490662-14490755,14491787-14492909
Length = 1537
Score = 27.9 bits (59), Expect = 5.2
Identities = 16/73 (21%), Positives = 28/73 (38%)
Frame = +3
Query: 279 EPAEAHRDSGEEPASGQRRCRSGESPPEPLGRS*TLRQDSDEAHDDGRKESTAPDRSYRS 458
E E H ++GE+ +C P + + + A ++E T D +
Sbjct: 149 ENGEKHEENGEKQNENGEKCEENGGKPAQISDDQAVNGCNGSADKKDKEEETEKDNE-KE 207
Query: 459 GEGKEQIPERHRE 497
E KE+ E+ E
Sbjct: 208 KEDKEEETEKDNE 220
>08_01_0434 + 3809681-3810016,3810039-3811100
Length = 465
Score = 27.9 bits (59), Expect = 5.2
Identities = 14/28 (50%), Positives = 15/28 (53%)
Frame = +3
Query: 291 AHRDSGEEPASGQRRCRSGESPPEPLGR 374
A GE G+RR R G SPPEP R
Sbjct: 58 ASSGGGEAGERGRRRGRLGFSPPEPPAR 85
>04_04_0057 + 22410167-22411330
Length = 387
Score = 27.9 bits (59), Expect = 5.2
Identities = 17/70 (24%), Positives = 25/70 (35%)
Frame = +3
Query: 282 PAEAHRDSGEEPASGQRRCRSGESPPEPLGRS*TLRQDSDEAHDDGRKESTAPDRSYRSG 461
P A + P R S PP P + + D++ +D RKE RS
Sbjct: 187 PPPAAAAASPSPERSPRCQPSPPPPPPPHALVIPVEDEEDDSDEDDRKEEAVELEMLRSE 246
Query: 462 EGKEQIPERH 491
++P H
Sbjct: 247 RRAARLPRSH 256
>03_05_0070 -
20478396-20478505,20478605-20478780,20481162-20481265,
20481346-20481504,20481718-20481857,20482222-20482311,
20482902-20482970,20484295-20484516,20486175-20486293,
20486377-20486492,20488058-20488146,20488790-20488883
Length = 495
Score = 27.9 bits (59), Expect = 5.2
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +2
Query: 110 KDLPKVATDLKSQLEGFNTSCLRDVDTNEKI 202
K+L + DLKS+LEG+NT D++ + +
Sbjct: 266 KELDERRHDLKSELEGYNTGDSDDINKKKAL 296
>02_03_0171 +
15945591-15945681,15947068-15947138,15947715-15947817,
15948189-15948328,15948535-15948693,15948775-15948878,
15950373-15950548,15952643-15952832,15953704-15953803,
15954171-15954339,15954908-15954990,15955073-15955149,
15955386-15955557
Length = 544
Score = 27.9 bits (59), Expect = 5.2
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = +2
Query: 110 KDLPKVATDLKSQLEGFNTSCLRDVDTNEKI 202
K+L + DLKS+LEG+NT D++ + +
Sbjct: 88 KELDERMHDLKSELEGYNTGDSDDINKKKAL 118
>12_01_0433 -
3402250-3402536,3402644-3403030,3403523-3403957,
3404071-3404562,3404718-3404821,3404913-3404994,
3405085-3405441,3405532-3406089,3406376-3406479,
3406575-3406650,3406764-3406898,3407192-3407494,
3407581-3408345,3409459-3412591,3412763-3412882
Length = 2445
Score = 27.1 bits (57), Expect = 9.0
Identities = 17/61 (27%), Positives = 28/61 (45%)
Frame = +3
Query: 297 RDSGEEPASGQRRCRSGESPPEPLGRS*TLRQDSDEAHDDGRKESTAPDRSYRSGEGKEQ 476
R G+ A G+ + E+P R+ D+D A DG KE A D + + ++Q
Sbjct: 136 RVGGDAAAEGEP---AAEAPRRRSRRNAVNSSDADGAEGDGAKEGEAVDNKRKQRQKQKQ 192
Query: 477 I 479
+
Sbjct: 193 V 193
>12_01_0377 -
2939384-2939505,2939629-2939695,2940324-2940543,
2940655-2940731,2940813-2940878,2940970-2941018,
2941131-2941181,2941262-2941314,2941432-2941486,
2941563-2941651,2941742-2941827,2941933-2941989,
2942086-2942275,2943847-2944005
Length = 446
Score = 27.1 bits (57), Expect = 9.0
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +1
Query: 241 PEVFIDGIEKFDSSQLKHTETQEKNPLPDKDVV 339
PEV +GIEKF++ T + P D++
Sbjct: 407 PEVEWEGIEKFNAEDFLEVSTPRQQDKPSSDIM 439
>08_02_0259 -
14974526-14974572,14974670-14974742,14974829-14974891,
14975030-14975097,14975172-14975295,14976434-14976493,
14976744-14976806,14976902-14977942,14978027-14978093,
14978188-14978303,14978454-14978540,14978749-14978838,
14979128-14979214,14979366-14979428,14979509-14979566,
14980174-14980231,14980349-14980416,14980508-14980587,
14981084-14981147,14981321-14981392,14981517-14981576,
14982344-14982398,14982487-14982520,14983845-14983931,
14984036-14984122,14984211-14984408,14984509-14984639,
14984739-14984838
Length = 1066
Score = 27.1 bits (57), Expect = 9.0
Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Frame = +1
Query: 220 RRRH*EDPE-VFIDGIEKFDSSQLK---HTETQEKNPLPDKDVVAAEKAHQNL 366
R+R +D + VF DGI+ SS ++ H E ++ + +KD++ E H +L
Sbjct: 357 RKRSSDDYQYVFEDGIDFVKSSVIEGTQHEEDSDQEDIDEKDMLKRELQHVSL 409
>07_03_0697 +
20759176-20759817,20760592-20760708,20761422-20761696,
20761906-20762068,20762293-20762421,20762989-20763713,
20763853-20764081
Length = 759
Score = 27.1 bits (57), Expect = 9.0
Identities = 18/77 (23%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
Frame = +3
Query: 288 EAHRDSGEEPASGQRRCRSGESPPEPLGRS*TLRQDSDEAHDDGRKESTAPDRSYRS--- 458
E H++ +E ++R RS + + L + D D+ E P++ ++
Sbjct: 531 EKHQEKMKEKRKSRKR-RSKDDDDDGYSSEDGLDEHDDFFDDEMSDEEIKPNKKQKAKAK 589
Query: 459 ----GEGKEQIPERHRE 497
G+GK+++PE+H E
Sbjct: 590 DKGKGKGKDKLPEQHLE 606
>06_03_0723 + 23875008-23875204,23875311-23875576,23877166-23877274,
23877577-23878212,23878328-23878573,23878669-23878834,
23878863-23879076,23879580-23880097,23880617-23880683,
23882131-23882215,23882292-23882367,23882593-23882756,
23883088-23883217,23883314-23883430,23883505-23883600,
23883732-23884009,23886571-23886794,23886935-23887011,
23887103-23887145,23887231-23887288,23888371-23888410,
23888891-23889418
Length = 1444
Score = 27.1 bits (57), Expect = 9.0
Identities = 23/74 (31%), Positives = 33/74 (44%)
Frame = +3
Query: 282 PAEAHRDSGEEPASGQRRCRSGESPPEPLGRS*TLRQDSDEAHDDGRKESTAPDRSYRSG 461
P E ++DS + S + ESP S + S +HDD R+ T PD S R+G
Sbjct: 1312 PGEPYQDSNKTDPSTP--VPTSESPIRDKAGSGLFKTIS--SHDDCREPLT-PDSSCRAG 1366
Query: 462 EGKEQIPERHRELR 503
E P + +R
Sbjct: 1367 SPLESPPRASKRIR 1380
>04_04_1085 -
30719921-30719960,30720206-30720351,30720469-30720546,
30720649-30720715,30720948-30721090,30721504-30721535,
30721769-30722168,30722540-30722601,30722716-30722892,
30723078-30723201,30723590-30723760
Length = 479
Score = 27.1 bits (57), Expect = 9.0
Identities = 14/54 (25%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Frame = +2
Query: 83 CSVSDTPSLKDLPKVATDLKSQLEGFNTSCLRDVDTNEKIVL--PSAEDVATEK 238
C + DT +K PK+ +D+K Q+E + + + + + +V+ + +DV +E+
Sbjct: 355 CDIEDT-LIKSNPKLTSDVKVQVEAEDMAMMLQLKPEDFVVVLDENGKDVTSEQ 407
>01_05_0160 + 18751512-18751960,18752082-18752553
Length = 306
Score = 27.1 bits (57), Expect = 9.0
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = -3
Query: 483 QEFVLFLLRFDSFDRGQWILFFRRRVLHLSLVEVFNSVQEVLV 355
+E LFLL D F +G W R V+ + +V + Q+ +
Sbjct: 147 EEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKYFI 189
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,960,265
Number of Sequences: 37544
Number of extensions: 298471
Number of successful extensions: 1129
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1089
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1128
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1130733700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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