Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20265
         (764 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4XCU2 Cluster: Putative uncharacterized protein; n=1; ...    36   1.1  
UniRef50_Q4V6X7 Cluster: IP01239p; n=2; Drosophila melanogaster|...    36   1.5  
UniRef50_Q4Y889 Cluster: Putative uncharacterized protein; n=1; ...    35   2.5  
UniRef50_A3J2F1 Cluster: Putative uncharacterized protein; n=1; ...    34   3.4  
UniRef50_Q6CB32 Cluster: Similarity; n=2; root|Rep: Similarity -...    34   4.4  
UniRef50_Q4Z5U0 Cluster: Putative uncharacterized protein; n=1; ...    33   7.8  

>UniRef50_Q4XCU2 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium chabaudi|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 91

 Score = 35.9 bits (79), Expect = 1.1
 Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
 Frame = +2

Query: 632 FYSLHHFKDFFINFF--YVLIISFNVIYTFILCVLTIY 739
           FY  H F +FF+NFF  Y L   F ++Y+ I   L IY
Sbjct: 34  FYLFHTFINFFLNFFMIYYLFFHFLLLYSLIFIFLQIY 71


>UniRef50_Q4V6X7 Cluster: IP01239p; n=2; Drosophila
           melanogaster|Rep: IP01239p - Drosophila melanogaster
           (Fruit fly)
          Length = 360

 Score = 35.5 bits (78), Expect = 1.5
 Identities = 18/47 (38%), Positives = 23/47 (48%)
 Frame = +2

Query: 614 CFWIPNFYSLHHFKDFFINFFYVLIISFNVIYTFILCVLTIYLKCIF 754
           C WI N    H+FK F +  FY  +  F   Y F + V  +YL C F
Sbjct: 177 CPWIVNCVHFHNFKYFILFLFYAEVYCF---YLFCVMVYDLYLICGF 220


>UniRef50_Q4Y889 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium chabaudi|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 104

 Score = 34.7 bits (76), Expect = 2.5
 Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
 Frame = +2

Query: 608 SCCFWIPNFYSLHHFKDF-FINFFYVLIISFNVIYTFILCVLTIYLKCIFYFI 763
           +CCF   N Y L +  DF FI   Y+   +F    TFI+ ++ I L   F+FI
Sbjct: 15  NCCF---NMYMLFYSFDFRFILSSYINTFTFVTFVTFIMLIMLIMLIIFFHFI 64


>UniRef50_A3J2F1 Cluster: Putative uncharacterized protein; n=1;
           Flavobacteria bacterium BAL38|Rep: Putative
           uncharacterized protein - Flavobacteria bacterium BAL38
          Length = 109

 Score = 34.3 bits (75), Expect = 3.4
 Identities = 17/41 (41%), Positives = 27/41 (65%), Gaps = 7/41 (17%)
 Frame = +2

Query: 641 LHHFKDFFINFF-YVLIIS------FNVIYTFILCVLTIYL 742
           +HHF  FF  +F + LII+      F+ ++TF++C+L IYL
Sbjct: 63  IHHFILFFFEYFRFDLIITILSRTLFSTLFTFVICLLIIYL 103


>UniRef50_Q6CB32 Cluster: Similarity; n=2; root|Rep: Similarity -
           Yarrowia lipolytica (Candida lipolytica)
          Length = 281

 Score = 33.9 bits (74), Expect = 4.4
 Identities = 18/49 (36%), Positives = 27/49 (55%)
 Frame = +2

Query: 617 FWIPNFYSLHHFKDFFINFFYVLIISFNVIYTFILCVLTIYLKCIFYFI 763
           ++I   +S  +F  FF  FFY+ I  F  I+ FI   + I++  IF FI
Sbjct: 22  YFIYFIFSFSYFFFFFFFFFYIFIFIFIFIFIFIFIFIFIFI-FIFIFI 69


>UniRef50_Q4Z5U0 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium berghei|Rep: Putative uncharacterized protein
           - Plasmodium berghei
          Length = 86

 Score = 33.1 bits (72), Expect = 7.8
 Identities = 15/42 (35%), Positives = 24/42 (57%)
 Frame = +2

Query: 632 FYSLHHFKDFFINFFYVLIISFNVIYTFILCVLTIYLKCIFY 757
           F  L++F   FI F+Y L+  F ++Y F+LC +  Y+    Y
Sbjct: 34  FIMLYYFLLCFIIFYYALLF-FIMLYYFLLCFIIFYVLLFIY 74


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 659,116,844
Number of Sequences: 1657284
Number of extensions: 11910058
Number of successful extensions: 22447
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 21596
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22399
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 63792713725
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)