Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20265
         (764 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    28   0.071
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    27   0.22 
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    23   2.0  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    23   2.0  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    22   4.7  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    21   8.2  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 28.3 bits (60), Expect = 0.071
 Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = +2

Query: 659 FFINFFYVLIISFNVIYTFIL-CVLTIYLKCIFYFI 763
           +F   F +L+  +   Y FI+  V  ++L CI+YF+
Sbjct: 102 YFYYAFIILLCVYYFYYAFIIFTVHLLFLLCIYYFV 137



 Score = 27.9 bits (59), Expect = 0.094
 Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 5/37 (13%)
 Frame = +2

Query: 665 INFFYVLIISFNVIYTFILCVL-----TIYLKCIFYF 760
           + +FY   I F V   F+LC+        +L CI+YF
Sbjct: 113 VYYFYYAFIIFTVHLLFLLCIYYFVVPLFFLLCIYYF 149



 Score = 27.1 bits (57), Expect = 0.16
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = +2

Query: 665 INFFYVLIISFNVIYTFILCVLTIYLKCIFY 757
           I +FY + I+FNV   F+LC     +  +FY
Sbjct: 56  IYYFYCVSITFNVHLLFLLCSGYFTVHLLFY 86



 Score = 24.2 bits (50), Expect = 1.2
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = +2

Query: 665 INFFYVLIISFNVIYTFILCVLTIYLKCIFY 757
           I +FY   I F V   F+LC+   +   I +
Sbjct: 146 IYYFYCAFIIFTVHLLFLLCIYHFFCAFIIF 176


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 26.6 bits (56), Expect = 0.22
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +2

Query: 668 NFFYVLIISFNVIYTFILCVLTIY 739
           N +Y+L+   NV+Y   LC    Y
Sbjct: 98  NLYYLLLFVINVLYVLTLCYAVYY 121


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = +2

Query: 647 HFKDFFINFFYVLIISFNVIYTFILCVLTI 736
           +F D F+    +L  +  ++ T  +C LTI
Sbjct: 275 NFHDIFLPLLCILTNTLEILITVTVCELTI 304


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = +2

Query: 647 HFKDFFINFFYVLIISFNVIYTFILCVLTI 736
           +F D F+    +L  +  ++ T  +C LTI
Sbjct: 100 NFHDIFLPLLCILTNTLEILITVTVCELTI 129


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -1

Query: 173 KNCPIYSSTSRLLS*KRIPNPHL 105
           K  PIYS  S+ +S + +PN  L
Sbjct: 39  KPAPIYSPVSKPVSFESLPNRRL 61


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +2

Query: 689 ISFNVIYTFILCVLTIY 739
           ++F  +Y F++  LTIY
Sbjct: 288 VTFLCLYLFLIITLTIY 304


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,358
Number of Sequences: 336
Number of extensions: 3266
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20546262
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)