Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20265
         (764 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT022179-1|AAY51573.1|  360|Drosophila melanogaster IP01239p pro...    36   0.080
AE013599-2438|AAF57887.1|  338|Drosophila melanogaster CG17287-P...    36   0.080

>BT022179-1|AAY51573.1|  360|Drosophila melanogaster IP01239p
           protein.
          Length = 360

 Score = 35.5 bits (78), Expect = 0.080
 Identities = 18/47 (38%), Positives = 23/47 (48%)
 Frame = +2

Query: 614 CFWIPNFYSLHHFKDFFINFFYVLIISFNVIYTFILCVLTIYLKCIF 754
           C WI N    H+FK F +  FY  +  F   Y F + V  +YL C F
Sbjct: 177 CPWIVNCVHFHNFKYFILFLFYAEVYCF---YLFCVMVYDLYLICGF 220


>AE013599-2438|AAF57887.1|  338|Drosophila melanogaster CG17287-PA
           protein.
          Length = 338

 Score = 35.5 bits (78), Expect = 0.080
 Identities = 18/47 (38%), Positives = 23/47 (48%)
 Frame = +2

Query: 614 CFWIPNFYSLHHFKDFFINFFYVLIISFNVIYTFILCVLTIYLKCIF 754
           C WI N    H+FK F +  FY  +  F   Y F + V  +YL C F
Sbjct: 155 CPWIVNCVHFHNFKYFILFLFYAEVYCF---YLFCVMVYDLYLICGF 198


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,558,344
Number of Sequences: 53049
Number of extensions: 552007
Number of successful extensions: 1050
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1014
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1048
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3520086471
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)