Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20264
         (657 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC090868-1|AAH90868.1|  247|Homo sapiens family with sequence si...    37   0.055
BC057771-1|AAH57771.1|  237|Homo sapiens family with sequence si...    37   0.055
BC032461-1|AAH32461.1|  237|Homo sapiens family with sequence si...    37   0.055
AK123855-1|BAC85711.1|  676|Homo sapiens protein ( Homo sapiens ...    30   8.3  

>BC090868-1|AAH90868.1|  247|Homo sapiens family with sequence
           similarity 133, member B protein.
          Length = 247

 Score = 37.1 bits (82), Expect = 0.055
 Identities = 18/58 (31%), Positives = 32/58 (55%)
 Frame = +3

Query: 96  LNPNSETEEDYKRSVQTLPRKLHDRKEKATEKPSSNKYWHRLTPNKRAASAANSPITP 269
           L+  S +E +Y   V+   +K  + +EKATEK    K   + +  K+  +A++SP +P
Sbjct: 190 LSSESLSESEYIEEVRAKKKKSSEEREKATEKTKKKKKHKKHSKKKKKKAASSSPDSP 247


>BC057771-1|AAH57771.1|  237|Homo sapiens family with sequence
           similarity 133, member B protein.
          Length = 237

 Score = 37.1 bits (82), Expect = 0.055
 Identities = 18/58 (31%), Positives = 32/58 (55%)
 Frame = +3

Query: 96  LNPNSETEEDYKRSVQTLPRKLHDRKEKATEKPSSNKYWHRLTPNKRAASAANSPITP 269
           L+  S +E +Y   V+   +K  + +EKATEK    K   + +  K+  +A++SP +P
Sbjct: 180 LSSESLSESEYIEEVRAKKKKSSEEREKATEKTKKKKKHKKHSKKKKKKAASSSPDSP 237


>BC032461-1|AAH32461.1|  237|Homo sapiens family with sequence
           similarity 133, member B protein.
          Length = 237

 Score = 37.1 bits (82), Expect = 0.055
 Identities = 18/58 (31%), Positives = 32/58 (55%)
 Frame = +3

Query: 96  LNPNSETEEDYKRSVQTLPRKLHDRKEKATEKPSSNKYWHRLTPNKRAASAANSPITP 269
           L+  S +E +Y   V+   +K  + +EKATEK    K   + +  K+  +A++SP +P
Sbjct: 180 LSSESLSESEYIEEVRAKKKKSSEEREKATEKTKKKKKHKKHSKKKKKKAASSSPDSP 237


>AK123855-1|BAC85711.1|  676|Homo sapiens protein ( Homo sapiens
           cDNA FLJ41861 fis, clone NTONG2008672. ).
          Length = 676

 Score = 29.9 bits (64), Expect = 8.3
 Identities = 33/101 (32%), Positives = 44/101 (43%), Gaps = 1/101 (0%)
 Frame = -1

Query: 603 GTVFPYRAPNRPSLLLSVSRETASASLVGYDFYRHDSWALQLLWCFIKFA*VGLDLYIVE 424
           G V      + P +  +V R T S+ LV     R D  A  L W   + A  G D  +VE
Sbjct: 304 GPVAKLEVASSPPVSEAVPRMTESSGLVSTPVPRAD--AAGLAWPPTRRA--GPD--VVE 357

Query: 423 *FRFIDDM*RGWV-CCSGAPIAKLLLLFKALYVRAGLAGPG 304
               + +   G   CCSGAP   L  + +   VR  +AGPG
Sbjct: 358 MEAVVSEPSAGAPGCCSGAPALGLTQVPRKKKVRFSVAGPG 398


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,699,831
Number of Sequences: 237096
Number of extensions: 2217918
Number of successful extensions: 5593
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5337
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5593
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7366354010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)