Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20263
         (756 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.      26   1.4  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    26   1.4  
AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containi...    25   1.9  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    25   2.5  
M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles ...    25   3.3  
AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.        24   4.4  

>AY578811-1|AAT07316.1|  565|Anopheles gambiae thickveins protein.
          Length = 565

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +3

Query: 393 KHTETCEKNSLPTKDVIEQEKS 458
           K+T TCE  +LP +DV+  + S
Sbjct: 477 KNTTTCEDYALPYQDVVPSDPS 498


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 25.8 bits (54), Expect = 1.4
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -3

Query: 625 RGCCTPPLPRQCCH 584
           +G C  P PR+CCH
Sbjct: 190 QGRCFGPKPRECCH 203


>AF291654-1|AAG00600.1| 1340|Anopheles gambiae thioester-containing
            protein I protein.
          Length = 1340

 Score = 25.4 bits (53), Expect = 1.9
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +1

Query: 496  YLASTPYFNIDVSQIDLRRPLQV 564
            Y  +T YFNI+  QID++  L++
Sbjct: 1139 YKKNTKYFNINSEQIDVQNFLEI 1161


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 15/26 (57%), Positives = 17/26 (65%)
 Frame = -2

Query: 614 YAAIAQAVLPLYKNKNKTCNGRRKSI 537
           Y  + QAVLPL KN N  CN  R+SI
Sbjct: 536 YIVLVQAVLPLDKNLN-DCN--RQSI 558


>M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 442

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 15/51 (29%), Positives = 20/51 (39%), Gaps = 2/51 (3%)
 Frame = -1

Query: 399 CASA*WDRSSRCRSGICSFPSPLR*RLCPEAGSSPES-RCAS-AGSNQTSH 253
           C    W RS  C S +C+    ++   C     S  S  CA   GS   +H
Sbjct: 13  CRDIVWLRSCSCHSSVCAVSFVMQCSTCNAPTDSANSVSCAGVCGSKHHTH 63


>AJ439353-11|CAD27933.1|  615|Anopheles gambiae 30E5.11 protein.
          Length = 615

 Score = 24.2 bits (50), Expect = 4.4
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -3

Query: 205 QTEAQSFHWCRRHGD 161
           QT +Q+ HW + HGD
Sbjct: 222 QTLSQANHWLKSHGD 236


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 768,029
Number of Sequences: 2352
Number of extensions: 16106
Number of successful extensions: 24
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 78170964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)