Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20259
         (633 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    88   7e-20
AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cogna...    84   1e-18
AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock prote...    84   1e-18
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    25   0.53 
DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory pro...    22   3.7  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   6.5  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    21   8.6  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    21   8.6  

>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 87.8 bits (208), Expect = 7e-20
 Identities = 39/59 (66%), Positives = 50/59 (84%)
 Frame = +1

Query: 7   EFRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 183
           +F  T++PV+K L DA M K QI +IVLVGGSTRIPK+Q+L++DFF+GKELN+ INPDE
Sbjct: 136 QFLKTLKPVKKVLEDADMTKDQIDEIVLVGGSTRIPKIQQLIKDFFDGKELNRGINPDE 194


>AY769607-1|AAV40983.1|  196|Tribolium castaneum heat shock cognate
           70 protein.
          Length = 196

 Score = 83.8 bits (198), Expect = 1e-18
 Identities = 36/58 (62%), Positives = 50/58 (86%)
 Frame = +1

Query: 10  FRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 183
           F+  ++PV+K L+DAK+ K+ +H+IVLVGGSTRIPKVQ+L+ ++FNGKE  +SINPDE
Sbjct: 138 FKKCIDPVDKVLQDAKIGKSAVHEIVLVGGSTRIPKVQQLITEYFNGKEPCRSINPDE 195


>AY769606-1|AAV40982.1|  196|Tribolium castaneum heat shock protein
           70 protein.
          Length = 196

 Score = 83.8 bits (198), Expect = 1e-18
 Identities = 36/58 (62%), Positives = 50/58 (86%)
 Frame = +1

Query: 10  FRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 183
           F+  ++PV+K L+DAK+ K+ +H+IVLVGGSTRIPKVQ+L+ ++FNGKE  +SINPDE
Sbjct: 138 FKKCIDPVDKVLQDAKIGKSAVHEIVLVGGSTRIPKVQQLITEYFNGKEPCRSINPDE 195


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 25.0 bits (52), Expect = 0.53
 Identities = 11/22 (50%), Positives = 12/22 (54%), Gaps = 1/22 (4%)
 Frame = -3

Query: 76  GFEPY-PSWHHGETSPLAPW*T 14
           GF P+ PS H G   P  PW T
Sbjct: 468 GFGPWKPSMHGGVCDPYTPWHT 489


>DQ855491-1|ABH88178.1|  144|Tribolium castaneum chemosensory
           protein 5 protein.
          Length = 144

 Score = 22.2 bits (45), Expect = 3.7
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 127 LLQDFFNGKELNKSINPDE 183
           +  DF NGK L++S   D+
Sbjct: 15  IFSDFVNGKTLHRSTRDDK 33


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -2

Query: 464 QLEFTEQVVIFGHSTLTLKYLDEYSGLV 381
           Q    +QV  F HS  ++ +L E  GLV
Sbjct: 362 QYVMQQQVKNFRHSVRSVFFLSEIFGLV 389


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = -1

Query: 117 LGDTSGATHQYNIVDLSLIHLGITE 43
           LG+T  +   Y++V++S IH  + +
Sbjct: 194 LGETWTSLSVYHLVEISEIHFDLCQ 218


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 8/25 (32%), Positives = 16/25 (64%)
 Frame = -1

Query: 117 LGDTSGATHQYNIVDLSLIHLGITE 43
           LG+T  +   Y++V++S IH  + +
Sbjct: 190 LGETWTSLSVYHLVEISEIHFDLCQ 214


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,189
Number of Sequences: 336
Number of extensions: 3303
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16292796
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)