Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20259
(633 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 132 3e-32
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 132 4e-32
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 114 1e-26
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 98 1e-21
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 95 7e-21
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 53 3e-08
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 46 5e-06
SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces pom... 31 0.10
SPAC1556.07 |pmm1||phosphomannomutase Pmm1|Schizosaccharomyces p... 30 0.24
SPBC3B9.02c |cwf28||splicing factor Cwf28|Schizosaccharomyces po... 27 1.7
SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3 ... 26 3.9
SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster ... 26 3.9
SPBC16C6.05 |||translation initiation factor |Schizosaccharomyce... 25 6.9
SPAC110.01 |ppk1|SPAC140.05|serine/threonine protein kinase Ppk1... 25 6.9
SPAC4H3.10c |pyk1||pyruvate kinase |Schizosaccharomyces pombe|ch... 25 9.1
SPBC18E5.01 ||SPBC29A3.19|cycloisomerase 2 family|Schizosaccharo... 25 9.1
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 132 bits (320), Expect = 3e-32
Identities = 66/85 (77%), Positives = 68/85 (80%)
Frame = +3
Query: 255 LLLDVTPLSLGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTK 434
LLLDV PLS+GIETAGGVMT LIKRN YSDNQPGVLIQVFEGERA TK
Sbjct: 390 LLLDVAPLSMGIETAGGVMTPLIKRNTTIPTKKSEIFSTYSDNQPGVLIQVFEGERARTK 449
Query: 435 DNNLLGKFELTGIPPAPRGVPQIEV 509
D NLLGKFEL+GIPPAPRGVPQIEV
Sbjct: 450 DCNLLGKFELSGIPPAPRGVPQIEV 474
Score = 109 bits (262), Expect = 3e-25
Identities = 53/85 (62%), Positives = 63/85 (74%)
Frame = +1
Query: 10 FRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXX 189
FR TMEPVE+ LRD+K+DKA +++IVLVGGSTRIP+VQKL+ DFFNGKE KSINPDE
Sbjct: 308 FRKTMEPVERVLRDSKVDKASVNEIVLVGGSTRIPRVQKLVSDFFNGKEPCKSINPDEAV 367
Query: 190 XXXXXXXXXILHGDKSEEVQDLCCL 264
+L GD SE+ QDL L
Sbjct: 368 AYGAAVQAAVLTGDTSEKTQDLLLL 392
Score = 70.5 bits (165), Expect = 2e-13
Identities = 33/41 (80%), Positives = 36/41 (87%)
Frame = +2
Query: 509 TFDIFANGILNVSAIEKSTNKENKITITNDKGRLSKEEIER 631
TFD+ ANGILNVSA+EK T K KITITNDKGRLSKEEI+R
Sbjct: 475 TFDVDANGILNVSALEKGTGKTQKITITNDKGRLSKEEIDR 515
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 132 bits (319), Expect = 4e-32
Identities = 66/85 (77%), Positives = 68/85 (80%)
Frame = +3
Query: 255 LLLDVTPLSLGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTK 434
LLLDV PLSLGIETAGGVMT LIKRN Y+DNQPGVLIQVFEGERA TK
Sbjct: 390 LLLDVAPLSLGIETAGGVMTPLIKRNTTIPTKKSEVFSTYADNQPGVLIQVFEGERARTK 449
Query: 435 DNNLLGKFELTGIPPAPRGVPQIEV 509
D NLLGKFEL+GIPPAPRGVPQIEV
Sbjct: 450 DCNLLGKFELSGIPPAPRGVPQIEV 474
Score = 109 bits (262), Expect = 3e-25
Identities = 53/85 (62%), Positives = 64/85 (75%)
Frame = +1
Query: 10 FRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXX 189
FR+TMEPVEK LRD+K+DK+ +++IVLVGGSTRIP++QKL+ DFFNGKE KSINPDE
Sbjct: 308 FRNTMEPVEKVLRDSKIDKSSVNEIVLVGGSTRIPRIQKLVSDFFNGKEPCKSINPDEAV 367
Query: 190 XXXXXXXXXILHGDKSEEVQDLCCL 264
IL GD SE+ QDL L
Sbjct: 368 AYGAAVQAAILVGDTSEKTQDLLLL 392
Score = 70.5 bits (165), Expect = 2e-13
Identities = 33/41 (80%), Positives = 36/41 (87%)
Frame = +2
Query: 509 TFDIFANGILNVSAIEKSTNKENKITITNDKGRLSKEEIER 631
TFD+ ANGILNVSA+EK T K KITITNDKGRLSKEEI+R
Sbjct: 475 TFDVDANGILNVSALEKGTGKTQKITITNDKGRLSKEEIDR 515
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 114 bits (274), Expect = 1e-26
Identities = 58/90 (64%), Positives = 63/90 (70%)
Frame = +3
Query: 240 GGAGSLLLDVTPLSLGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGE 419
G +LLDV PL+LGIET GGVMT LI RN DNQ VLIQV+EGE
Sbjct: 414 GSDNIVLLDVIPLTLGIETTGGVMTKLIGRNTPIPTRKSQIFSTAVDNQNTVLIQVYEGE 473
Query: 420 RAMTKDNNLLGKFELTGIPPAPRGVPQIEV 509
R +TKDNNLLGKF+L GIPPAPRGVPQIEV
Sbjct: 474 RTLTKDNNLLGKFDLRGIPPAPRGVPQIEV 503
Score = 81.4 bits (192), Expect = 1e-16
Identities = 38/78 (48%), Positives = 55/78 (70%)
Frame = +1
Query: 10 FRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXX 189
F+ T++PVE+ L+D+ + K++I DIVLVGGSTRIPKVQ+LL+ FF GK+ +K INPDE
Sbjct: 340 FKKTLKPVEQVLKDSNLKKSEIDDIVLVGGSTRIPKVQELLESFF-GKKASKGINPDEAV 398
Query: 190 XXXXXXXXXILHGDKSEE 243
+L G++ +
Sbjct: 399 AYGAAVQAGVLSGEEGSD 416
Score = 53.2 bits (122), Expect = 3e-08
Identities = 25/42 (59%), Positives = 33/42 (78%), Gaps = 1/42 (2%)
Frame = +2
Query: 509 TFDIFANGILNVSAIEKS-TNKENKITITNDKGRLSKEEIER 631
TF++ ANG+L VSA++KS K K+ I NDKGRLS+E+IER
Sbjct: 504 TFEVDANGVLTVSAVDKSGKGKPEKLVIKNDKGRLSEEDIER 545
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 97.9 bits (233), Expect = 1e-21
Identities = 48/85 (56%), Positives = 57/85 (67%)
Frame = +3
Query: 255 LLLDVTPLSLGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTK 434
+LLDVTPLSLGIET GGV T LI RN +D Q V I+VF+GER + +
Sbjct: 433 VLLDVTPLSLGIETLGGVFTRLINRNTTIPTRKSQVFSTAADGQTAVEIRVFQGERELVR 492
Query: 435 DNNLLGKFELTGIPPAPRGVPQIEV 509
DN L+G F+LTGI PAP+G PQIEV
Sbjct: 493 DNKLIGNFQLTGIAPAPKGQPQIEV 517
Score = 57.2 bits (132), Expect = 2e-09
Identities = 25/72 (34%), Positives = 46/72 (63%)
Frame = +1
Query: 13 RSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXX 192
R T++P +++L+DA + ++I++++LVGG TR+P+V + ++ F +E KS+NPDE
Sbjct: 357 RRTIDPCKRALKDANLQTSEINEVILVGGMTRMPRVVETVKSIFK-REPAKSVNPDEAVA 415
Query: 193 XXXXXXXXILHG 228
+L G
Sbjct: 416 IGAAIQGGVLSG 427
Score = 43.2 bits (97), Expect = 3e-05
Identities = 20/40 (50%), Positives = 30/40 (75%)
Frame = +2
Query: 509 TFDIFANGILNVSAIEKSTNKENKITITNDKGRLSKEEIE 628
+FD+ A+GI+NVSA +K+TNK++ IT+ G L+ EIE
Sbjct: 518 SFDVDADGIINVSARDKATNKDSSITVAGSSG-LTDSEIE 556
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 95.1 bits (226), Expect = 7e-21
Identities = 46/86 (53%), Positives = 62/86 (72%), Gaps = 1/86 (1%)
Frame = +1
Query: 10 FRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXX 189
F++T++PV K L+D+K+ KA +HDIVLVGGSTRIPKVQ+L+ DFF+G+ LNKSINPDE
Sbjct: 312 FKATIDPVAKVLKDSKVPKADVHDIVLVGGSTRIPKVQRLVSDFFDGRALNKSINPDEAV 371
Query: 190 XXXXXXXXXIL-HGDKSEEVQDLCCL 264
+L + S++ QDL L
Sbjct: 372 AYGAAVQAAVLTNKADSDKTQDLLLL 397
Score = 72.1 bits (169), Expect = 6e-14
Identities = 36/84 (42%), Positives = 46/84 (54%)
Frame = +3
Query: 255 LLLDVTPLSLGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTK 434
LLLDV PLSLG+ G V + RN +DNQ V V++GER
Sbjct: 395 LLLDVVPLSLGVAMEGNVFGVVCPRNTPIPTIKKRTFTTVADNQTTVTFPVYQGERVNCA 454
Query: 435 DNNLLGKFELTGIPPAPRGVPQIE 506
+N LG+F+LTGIPP PRG ++E
Sbjct: 455 ENEPLGEFQLTGIPPMPRGQAELE 478
Score = 44.0 bits (99), Expect = 2e-05
Identities = 20/40 (50%), Positives = 28/40 (70%)
Frame = +2
Query: 509 TFDIFANGILNVSAIEKSTNKENKITITNDKGRLSKEEIE 628
TF++ ANGIL V+A+EK+T + I ITN G LS +I+
Sbjct: 480 TFELDANGILKVTAVEKTTGRSAHIEITNSVGHLSSTKIQ 519
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 53.2 bits (122), Expect = 3e-08
Identities = 20/56 (35%), Positives = 40/56 (71%)
Frame = +1
Query: 16 STMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 183
+ +EP+ K+L+ A + ++I+ I+L GG++RIP +Q L D+ + +++K++N DE
Sbjct: 346 AAVEPINKALKKANLTFSEINSIILFGGASRIPFIQSTLADYVSSDKISKNVNADE 401
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 46.0 bits (104), Expect = 5e-06
Identities = 21/52 (40%), Positives = 37/52 (71%)
Frame = +1
Query: 28 PVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 183
P+EK+L A + K ++ I +VGG TR+P V++++ ++F GK L+ ++N DE
Sbjct: 322 PIEKALELAGIKKEDLYSIEMVGGCTRVPIVKEVIANYF-GKGLSFTLNQDE 372
>SPAC57A7.12 |||heat shock protein Pdr13 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 566
Score = 31.5 bits (68), Expect = 0.10
Identities = 12/46 (26%), Positives = 27/46 (58%)
Frame = +1
Query: 31 VEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKS 168
V +++ A M+ I +++L GG++ PK+ L++ F + + +S
Sbjct: 341 VTEAVEKANMEPFDISEVILAGGASNTPKLTSLMESIFPEQTIIRS 386
>SPAC1556.07 |pmm1||phosphomannomutase Pmm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 257
Score = 30.3 bits (65), Expect = 0.24
Identities = 14/35 (40%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = +2
Query: 506 GTFDIFANGILNVSAIEKSTNKENKITITN-DKGR 607
GTF F NG++N+S + ++ N E + DKGR
Sbjct: 127 GTFIEFRNGMINISPVGRNANTEERNEFERFDKGR 161
>SPBC3B9.02c |cwf28||splicing factor Cwf28|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 381
Score = 27.5 bits (58), Expect = 1.7
Identities = 13/36 (36%), Positives = 17/36 (47%), Gaps = 1/36 (2%)
Frame = +1
Query: 529 RYPQRFRYREVHQQGEQDHHYQRQRSS-LQGRDRAY 633
R P R +YRE H + + H R QGR +Y
Sbjct: 320 RDPDRTKYREYHSERRKQHRTDRYSDDYYQGRSYSY 355
>SPAC24B11.10c |chr3|cfh1|chitin synthase regulatory factor Chr3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 932
Score = 26.2 bits (55), Expect = 3.9
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -3
Query: 79 RGFEPYPSWHHGETSPLAP 23
+ +P P+ HG+TSPL+P
Sbjct: 420 KAIKPMPTSIHGQTSPLSP 438
>SPBC16G5.16 |||transcription factor zf-fungal binuclear cluster
type |Schizosaccharomyces pombe|chr 2|||Manual
Length = 827
Score = 26.2 bits (55), Expect = 3.9
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = +1
Query: 331 TLPSPLNRLRHSPPTLITNPEYSSKYLR 414
T P RLRH+P I E KYLR
Sbjct: 43 TYGQPFKRLRHAPEKYIEFLELRLKYLR 70
>SPBC16C6.05 |||translation initiation factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 190
Score = 25.4 bits (53), Expect = 6.9
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +2
Query: 536 LNVSAIEKSTNKENKITITNDKGRLSKEEIER 631
LNVS + S +E +T ++ R+ +EE +R
Sbjct: 63 LNVSGTKDSNAEEQPAKLTKEEKRVEREEAKR 94
>SPAC110.01 |ppk1|SPAC140.05|serine/threonine protein kinase Ppk1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1023
Score = 25.4 bits (53), Expect = 6.9
Identities = 23/88 (26%), Positives = 38/88 (43%), Gaps = 1/88 (1%)
Frame = +1
Query: 217 ILHGDKSEEVQDLCCLM*HPF-PSVLRLLEVS*PHSSSVTLPSPLNRLRHSPPTLITNPE 393
IL D ++ V+ + +M H + S + L E ++ PSP+ L +++
Sbjct: 754 ILVPDPAKRVR-MSAIMNHAYLRSHVSLFETYNDDEATSLRPSPIRLLSQKSLASVSSVS 812
Query: 394 YSSKYLRVSVL*PKITTCSVNSS*PGSH 477
S Y L P+IT S+N P H
Sbjct: 813 SISTYSSSIELTPQITKTSLNREKPALH 840
>SPAC4H3.10c |pyk1||pyruvate kinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 509
Score = 25.0 bits (52), Expect = 9.1
Identities = 11/32 (34%), Positives = 22/32 (68%)
Frame = +2
Query: 527 NGILNVSAIEKSTNKENKITITNDKGRLSKEE 622
+GIL+ + IEK +K K+ + N+ G++S ++
Sbjct: 154 DGILSFTVIEKVDDKNLKVRV-NNNGKISSKK 184
>SPBC18E5.01 ||SPBC29A3.19|cycloisomerase 2
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 342
Score = 25.0 bits (52), Expect = 9.1
Identities = 12/41 (29%), Positives = 18/41 (43%)
Frame = -2
Query: 476 WDPGQLEFTEQVVIFGHSTLTLKYLDEYSGLVIRVGGECLS 354
WD G+ ++ I GHS +L L+ S L +S
Sbjct: 61 WDNGKFSLVDRFTIDGHSPTSLCVLENGSVLTANYNSASIS 101
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,667,881
Number of Sequences: 5004
Number of extensions: 54853
Number of successful extensions: 240
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 212
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 237
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 281707720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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