BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS20259 (633 letters) Database: nematostella 59,808 sequences; 16,821,457 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) 132 2e-31 SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) 125 3e-29 SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) 120 1e-27 SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) 111 5e-25 SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) 102 2e-22 SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) 73 2e-13 SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) 65 4e-11 SB_47390| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 4e-07 SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 8e-06 SB_24074| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004 SB_51336| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1 SB_7408| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.1 SB_54041| Best HMM Match : Peptidase_A17 (HMM E-Value=4.5e-11) 28 5.5 SB_37567| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.5 SB_55904| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2 SB_48878| Best HMM Match : Fibrinogen_C (HMM E-Value=0) 28 7.2 SB_42043| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2 SB_38590| Best HMM Match : 7tm_1 (HMM E-Value=0.0022) 28 7.2 SB_25894| Best HMM Match : Coatomer_WDAD (HMM E-Value=0) 28 7.2 SB_21529| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6 SB_17020| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6 SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.6 SB_12405| Best HMM Match : I-set (HMM E-Value=8.8e-21) 27 9.6 >SB_45540| Best HMM Match : HSP70 (HMM E-Value=0) Length = 1097 Score = 132 bits (320), Expect = 2e-31 Identities = 65/85 (76%), Positives = 68/85 (80%) Frame = +3 Query: 255 LLLDVTPLSLGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTK 434 LLLDV PLS+GIETAGGVM+ LIKRN YSDNQPGVLIQVFEGER+MT Sbjct: 394 LLLDVAPLSMGIETAGGVMSVLIKRNSTIPTKQTQTFTTYSDNQPGVLIQVFEGERSMTA 453 Query: 435 DNNLLGKFELTGIPPAPRGVPQIEV 509 NNLLGKFELTGIPPAPRGVPQIEV Sbjct: 454 HNNLLGKFELTGIPPAPRGVPQIEV 478 Score = 107 bits (256), Expect = 1e-23 Identities = 52/87 (59%), Positives = 63/87 (72%), Gaps = 2/87 (2%) Frame = +1 Query: 10 FRSTMEPVEKSLRDAKMD--KAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 183 F+ T EPVE+++RD+K+ K IHDIVLVGGSTRIPK+QK+LQ+ F GKELNKSINPDE Sbjct: 310 FKKTTEPVEQAIRDSKIPGGKESIHDIVLVGGSTRIPKIQKMLQELFGGKELNKSINPDE 369 Query: 184 XXXXXXXXXXXILHGDKSEEVQDLCCL 264 ILHGDK + V+DL L Sbjct: 370 AVAYGAAVQAAILHGDKDDTVKDLLLL 396 Score = 76.6 bits (180), Expect = 2e-14 Identities = 36/41 (87%), Positives = 39/41 (95%) Frame = +2 Query: 509 TFDIFANGILNVSAIEKSTNKENKITITNDKGRLSKEEIER 631 TFDI ANGILNVSA++KST KENKITITNDKGRLSKE+IER Sbjct: 479 TFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKEDIER 519 >SB_56180| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 746 Score = 125 bits (302), Expect = 3e-29 Identities = 60/85 (70%), Positives = 67/85 (78%) Frame = +3 Query: 255 LLLDVTPLSLGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTK 434 LLLDV PL+LG+ETAGGVMT IKRN YSDNQ VLIQV+EGER++TK Sbjct: 486 LLLDVAPLTLGLETAGGVMTAAIKRNTTIPTKQTQTFTTYSDNQTSVLIQVYEGERSLTK 545 Query: 435 DNNLLGKFELTGIPPAPRGVPQIEV 509 DNNLLGKFEL+GIPPAPRGVPQI+V Sbjct: 546 DNNLLGKFELSGIPPAPRGVPQIDV 570 Score = 113 bits (272), Expect = 1e-25 Identities = 54/88 (61%), Positives = 67/88 (76%), Gaps = 1/88 (1%) Frame = +1 Query: 4 HEFRSTMEPVEKSLRDAKMD-KAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPD 180 H F+ T+EPVEK+++D+K++ K +I +IV+VGGSTRIPK+Q LLQ+FFNGKELNKSINPD Sbjct: 401 HLFKKTLEPVEKAIKDSKLESKEKIDEIVMVGGSTRIPKIQSLLQNFFNGKELNKSINPD 460 Query: 181 EXXXXXXXXXXXILHGDKSEEVQDLCCL 264 E ILHGDKSE QDL L Sbjct: 461 EAVAYGAAVQAAILHGDKSEATQDLLLL 488 Score = 74.9 bits (176), Expect = 5e-14 Identities = 34/41 (82%), Positives = 39/41 (95%) Frame = +2 Query: 509 TFDIFANGILNVSAIEKSTNKENKITITNDKGRLSKEEIER 631 TFD+ +NGILNVSA++KST KENKITITNDKGRLSKE+IER Sbjct: 571 TFDVDSNGILNVSAVDKSTGKENKITITNDKGRLSKEDIER 611 >SB_8490| Best HMM Match : HSP70 (HMM E-Value=0) Length = 640 Score = 120 bits (289), Expect = 1e-27 Identities = 59/85 (69%), Positives = 65/85 (76%) Frame = +3 Query: 255 LLLDVTPLSLGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTK 434 LL+DV PLSLGIETAG VMT LI+RN YSDNQP V I+VFEGER +TK Sbjct: 393 LLVDVAPLSLGIETAGEVMTKLIERNARIPTKATQTFTTYSDNQPAVTIRVFEGERPLTK 452 Query: 435 DNNLLGKFELTGIPPAPRGVPQIEV 509 NNLLGKF+L+GIPPAPRGVPQIEV Sbjct: 453 HNNLLGKFDLSGIPPAPRGVPQIEV 477 Score = 104 bits (249), Expect = 7e-23 Identities = 46/82 (56%), Positives = 62/82 (75%) Frame = +1 Query: 10 FRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXX 189 F S ++PV K+L DAK K+ IH++VLVGGSTR+PK+QK+L+++F+GK LNKSINPDE Sbjct: 311 FLSCLDPVNKALSDAKFSKSDIHEVVLVGGSTRVPKIQKMLEEYFSGKSLNKSINPDEAV 370 Query: 190 XXXXXXXXXILHGDKSEEVQDL 255 IL GDKS+EV+D+ Sbjct: 371 AYGAAVQAAILSGDKSDEVKDV 392 Score = 67.3 bits (157), Expect = 1e-11 Identities = 33/41 (80%), Positives = 35/41 (85%) Frame = +2 Query: 509 TFDIFANGILNVSAIEKSTNKENKITITNDKGRLSKEEIER 631 TFDI ANGILNVSA +KST K ITITNDKGRLSKEEI+R Sbjct: 478 TFDIDANGILNVSAKDKSTGKTGSITITNDKGRLSKEEIDR 518 >SB_45647| Best HMM Match : HSP70 (HMM E-Value=0) Length = 1327 Score = 111 bits (267), Expect = 5e-25 Identities = 56/85 (65%), Positives = 61/85 (71%) Frame = +3 Query: 255 LLLDVTPLSLGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTK 434 +LLDV PL+LGIET GGVMT LI RN +DNQ V IQVFEGER MTK Sbjct: 1087 VLLDVNPLTLGIETVGGVMTKLISRNTVIPTKKSQVFSTAADNQNTVTIQVFEGERPMTK 1146 Query: 435 DNNLLGKFELTGIPPAPRGVPQIEV 509 DN+ LGKF+L GIPPAPRGVPQIEV Sbjct: 1147 DNHPLGKFDLNGIPPAPRGVPQIEV 1171 Score = 89.0 bits (211), Expect = 3e-18 Identities = 40/75 (53%), Positives = 56/75 (74%) Frame = +1 Query: 10 FRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXX 189 F+ST++PV+K L DA + K++IH+IVLVGGSTRIPKVQ+L++DFF GKE ++ INPDE Sbjct: 1007 FKSTLKPVQKVLEDADLKKSEIHEIVLVGGSTRIPKVQQLVKDFFEGKEPSRGINPDEAV 1066 Query: 190 XXXXXXXXXILHGDK 234 +L G++ Sbjct: 1067 AYGAAVQAGVLGGEE 1081 Score = 53.2 bits (122), Expect = 2e-07 Identities = 25/41 (60%), Positives = 31/41 (75%) Frame = +2 Query: 509 TFDIFANGILNVSAIEKSTNKENKITITNDKGRLSKEEIER 631 TF+I NGIL VSA +K T + KITITND+ RL+ E+IER Sbjct: 1172 TFEIDVNGILRVSAEDKGTGNKEKITITNDQNRLTPEDIER 1212 >SB_38725| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 766 Score = 102 bits (245), Expect = 2e-22 Identities = 52/85 (61%), Positives = 58/85 (68%) Frame = +3 Query: 255 LLLDVTPLSLGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTK 434 LLLDVTPLSLGIET GGV T LI RN +D Q V I+VF+GER M Sbjct: 198 LLLDVTPLSLGIETLGGVFTKLITRNTTIPTKKSQVFSTAADGQTQVEIKVFQGEREMAI 257 Query: 435 DNNLLGKFELTGIPPAPRGVPQIEV 509 DN LLG+F+L GIPPAPRGVPQ+EV Sbjct: 258 DNKLLGQFQLVGIPPAPRGVPQVEV 282 Score = 65.7 bits (153), Expect = 3e-11 Identities = 31/71 (43%), Positives = 48/71 (67%) Frame = +1 Query: 19 TMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXX 198 T+ P +K L+DA+++K +I D++LVGG TR+PKVQ+ +QD F G+ +K++NPDE Sbjct: 124 TVGPCKKCLQDAEINKGEIGDVLLVGGMTRMPKVQQTVQDIF-GRVPSKAVNPDEAVAIG 182 Query: 199 XXXXXXILHGD 231 +L GD Sbjct: 183 AAIQGGVLAGD 193 Score = 43.6 bits (98), Expect = 1e-04 Identities = 23/40 (57%), Positives = 28/40 (70%) Frame = +2 Query: 509 TFDIFANGILNVSAIEKSTNKENKITITNDKGRLSKEEIE 628 TFDI ANGI+NVSA +K T +E +I I G LSK+ IE Sbjct: 283 TFDIDANGIVNVSARDKGTGREQQIVI-QSSGGLSKDAIE 321 >SB_37014| Best HMM Match : HSP70 (HMM E-Value=5.9e-16) Length = 212 Score = 72.9 bits (171), Expect = 2e-13 Identities = 39/70 (55%), Positives = 44/70 (62%) Frame = +3 Query: 255 LLLDVTPLSLGIETAGGVMTTLIKRNXXXXXXXXXXXXXYSDNQPGVLIQVFEGERAMTK 434 LLLDVTPLSLGIET GGV T LI RN +D Q V I+VF+GER M Sbjct: 143 LLLDVTPLSLGIETLGGVFTKLITRNTTIPTKKSQVFSTAADGQTQVEIKVFQGEREMAI 202 Query: 435 DNNLLGKFEL 464 DN LLG+F+L Sbjct: 203 DNKLLGQFQL 212 Score = 65.7 bits (153), Expect = 3e-11 Identities = 31/71 (43%), Positives = 48/71 (67%) Frame = +1 Query: 19 TMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXX 198 T+ P +K L+DA+++K +I D++LVGG TR+PKVQ+ +QD F G+ +K++NPDE Sbjct: 69 TVGPCKKCLQDAEINKGEIGDVLLVGGMTRMPKVQQTVQDIF-GRVPSKAVNPDEAVAIG 127 Query: 199 XXXXXXILHGD 231 +L GD Sbjct: 128 AAIQGGVLAGD 138 >SB_51590| Best HMM Match : HSP70 (HMM E-Value=4.4e-36) Length = 437 Score = 65.3 bits (152), Expect = 4e-11 Identities = 23/57 (40%), Positives = 45/57 (78%) Frame = +1 Query: 10 FRSTMEPVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPD 180 F+ ++P+ + L + ++ K ++ ++VLVGGSTR+PK+++L+Q+FF+GK N +I+P+ Sbjct: 343 FKKVLQPIRRVLAEVELPKEEVDEVVLVGGSTRVPKIRQLIQEFFDGKPPNVAIDPE 399 >SB_47390| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 168 Score = 52.0 bits (119), Expect = 4e-07 Identities = 23/63 (36%), Positives = 40/63 (63%) Frame = +1 Query: 58 MDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEXXXXXXXXXXXILHGDKS 237 + ++ + ++LVGG+TR PK+Q+LL+++F GKE+ + I+PDE IL G K Sbjct: 35 LKQSSMIQVILVGGATRTPKIQQLLKNYFVGKEICRRISPDEVVAYGAAVQASILMGRKE 94 Query: 238 EEV 246 ++ Sbjct: 95 ADM 97 >SB_31398| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 1019 Score = 47.6 bits (108), Expect = 8e-06 Identities = 24/52 (46%), Positives = 30/52 (57%) Frame = +1 Query: 28 PVEKSLRDAKMDKAQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 183 PV ++L+ A M I +VLVGG R+PKVQ L EL K+IN DE Sbjct: 300 PVNRALKSASMTMNDIDSVVLVGGGIRVPKVQDALLRAVKKPELAKNINADE 351 >SB_24074| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 87 Score = 38.7 bits (86), Expect = 0.004 Identities = 17/38 (44%), Positives = 28/38 (73%) Frame = +1 Query: 70 QIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDE 183 +I + +VGGSTRIP ++ ++++ F GKEL ++N DE Sbjct: 6 EIDSVEIVGGSTRIPAIKDIIKNVF-GKELMTTMNADE 42 >SB_51336| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 257 Score = 28.7 bits (61), Expect = 4.1 Identities = 15/31 (48%), Positives = 18/31 (58%) Frame = -1 Query: 555 SIAETLRIPLANMSKVPQFEARHAAPVGSRS 463 +I ETL + VP+ ARHA PVGS S Sbjct: 136 TITETLIKECKEEASVPEHIARHAVPVGSVS 166 >SB_7408| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 156 Score = 28.7 bits (61), Expect = 4.1 Identities = 14/34 (41%), Positives = 19/34 (55%) Frame = +1 Query: 526 QRYPQRFRYREVHQQGEQDHHYQRQRSSLQGRDR 627 QR QR R R+ H+Q ++ QRQR + R R Sbjct: 36 QRQRQRQRQRQRHRQRQRQRQRQRQRQRQRQRQR 69 >SB_54041| Best HMM Match : Peptidase_A17 (HMM E-Value=4.5e-11) Length = 1461 Score = 28.3 bits (60), Expect = 5.5 Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 4/51 (7%) Frame = +1 Query: 478 RRRVACLKLRYLRHICQRYPQRFRYRE---VHQ-QGEQDHHYQRQRSSLQG 618 R R K+R H C+R+ RF+ R+ VH+ GE H RQR+++ G Sbjct: 1149 RLRQLVRKVRKKCHGCKRFQARFQGRKSEAVHRTPGEARSHLLRQRTNVCG 1199 >SB_37567| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 278 Score = 28.3 bits (60), Expect = 5.5 Identities = 14/29 (48%), Positives = 20/29 (68%) Frame = -3 Query: 484 GAGGIPVSSNLPSKLLSLVIARSPSNTWM 398 G GG PV+S SKL++ VIA SN+++ Sbjct: 21 GRGGSPVTSRPGSKLINHVIASFQSNSFI 49 >SB_55904| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 94 Score = 27.9 bits (59), Expect = 7.2 Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 1/28 (3%) Frame = -3 Query: 304 PPAVSIPRERGVTSSNRDPAPPQT-CHR 224 PP S P + G+ S + P PPQT HR Sbjct: 45 PPIESSPPKTGIYSRHLQPTPPQTNTHR 72 >SB_48878| Best HMM Match : Fibrinogen_C (HMM E-Value=0) Length = 1213 Score = 27.9 bits (59), Expect = 7.2 Identities = 13/40 (32%), Positives = 19/40 (47%) Frame = -2 Query: 365 ECLSLFSGDGSVTLDECGHDTSSSLNTEGKGCYIKQQRSC 246 +C+ + S DG CGH T+ + G C+ Q SC Sbjct: 728 DCVYMSSSDGKWRFKNCGHTTAGYICKRGLMCH---QASC 764 >SB_42043| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 259 Score = 27.9 bits (59), Expect = 7.2 Identities = 14/33 (42%), Positives = 18/33 (54%) Frame = +1 Query: 526 QRYPQRFRYREVHQQGEQDHHYQRQRSSLQGRD 624 QRY + + RE HQ+G HH R S + RD Sbjct: 136 QRY-RDYEDRERHQRGRDRHHRDRDDSGCRFRD 167 >SB_38590| Best HMM Match : 7tm_1 (HMM E-Value=0.0022) Length = 284 Score = 27.9 bits (59), Expect = 7.2 Identities = 19/58 (32%), Positives = 26/58 (44%) Frame = -2 Query: 467 GQLEFTEQVVIFGHSTLTLKYLDEYSGLVIRVGGECLSLFSGDGSVTLDECGHDTSSS 294 GQL T VI+G T + DEY ++ + C G+ S D+ HDT S Sbjct: 224 GQLSTTINPVIYGVMNKTFR--DEYKRMLCSLSCWCGCGRRGEASFESDDSQHDTRLS 279 >SB_25894| Best HMM Match : Coatomer_WDAD (HMM E-Value=0) Length = 1066 Score = 27.9 bits (59), Expect = 7.2 Identities = 9/19 (47%), Positives = 12/19 (63%) Frame = +1 Query: 334 LPSPLNRLRHSPPTLITNP 390 LP N + H+PPT + NP Sbjct: 760 LPDTANEIEHAPPTTVINP 778 >SB_21529| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 367 Score = 27.5 bits (58), Expect = 9.6 Identities = 10/34 (29%), Positives = 19/34 (55%) Frame = +1 Query: 514 RHICQRYPQRFRYREVHQQGEQDHHYQRQRSSLQ 615 +H ++ Q+ +Y++ HQ Q H Q+Q+ Q Sbjct: 293 QHQLHQHQQQHQYQQQHQHQHQHQHQQQQQQQQQ 326 >SB_17020| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 957 Score = 27.5 bits (58), Expect = 9.6 Identities = 19/52 (36%), Positives = 27/52 (51%) Frame = -1 Query: 243 LLRLVTVQDSSLDSCTISYGLVRVNRFVELLSIKEILQELLHLGDTSGATHQ 88 L ++ VQ +S D C +YG+V + L S +E L+ LHL T T Q Sbjct: 481 LSAILAVQVASFD-CAKNYGVVSWLNCLALQSGRESLETTLHLLQTMWETMQ 531 >SB_13398| Best HMM Match : No HMM Matches (HMM E-Value=.) Length = 2149 Score = 27.5 bits (58), Expect = 9.6 Identities = 21/78 (26%), Positives = 39/78 (50%), Gaps = 1/78 (1%) Frame = -1 Query: 264 QATEILHLLRLVTVQDSSLDSCTISYGLVRVN-RFVELLSIKEILQELLHLGDTSGATHQ 88 QA +I +L +L T + + S +++ + ++ R ELL +K+ L+ + SG Sbjct: 1154 QAFKISYLTKLNTTKTTDNKSTLLNFLVQKIEERCPELLDVKDDLRTVPIAAKVSGQLLA 1213 Query: 87 YNIVDLSLIHLGITERLL 34 + DLS GI + L+ Sbjct: 1214 TEVQDLSRRMKGIKDDLI 1231 >SB_12405| Best HMM Match : I-set (HMM E-Value=8.8e-21) Length = 198 Score = 27.5 bits (58), Expect = 9.6 Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 3/43 (6%) Frame = -2 Query: 335 SVTLDECGHDTSSSLNTEGKGC---YIKQQRSCTSSDLSPCKI 216 +VTLD+ G ++NT G G I QR + DL CK+ Sbjct: 147 NVTLDDSGLYRCKAVNTAGTGSKQFNINVQRGSSRVDLQACKL 189 Database: nematostella Posted date: Oct 22, 2007 1:22 PM Number of letters in database: 16,821,457 Number of sequences in database: 59,808 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 20,687,549 Number of Sequences: 59808 Number of extensions: 454524 Number of successful extensions: 1509 Number of sequences better than 10.0: 23 Number of HSP's better than 10.0 without gapping: 1299 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1498 length of database: 16,821,457 effective HSP length: 79 effective length of database: 12,096,625 effective search space used: 1584657875 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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