Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20257
(799 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g25240.1 68415.m03020 serpin, putative / serine protease inhi... 60 2e-09
At3g45220.1 68416.m04880 serpin, putative / serine protease inhi... 58 5e-09
At2g26390.1 68415.m03167 serpin, putative / serine protease inhi... 57 2e-08
At2g14540.1 68415.m01628 serpin family protein / serine protease... 54 1e-07
At1g64030.1 68414.m07252 serpin family protein / serine protease... 53 3e-07
At1g51330.1 68414.m05772 serpin-related / serine protease inhibi... 53 3e-07
At1g63280.1 68414.m07154 serpin-related / serine protease inhibi... 51 8e-07
At1g47710.1 68414.m05302 serpin, putative / serine protease inhi... 50 1e-06
At1g62170.1 68414.m07013 serpin family protein / serine protease... 49 4e-06
At2g35580.1 68415.m04357 serpin family protein / serine protease... 46 3e-05
At1g33390.1 68414.m04133 helicase domain-containing protein simi... 30 1.5
At1g72410.1 68414.m08374 COP1-interacting protein-related simila... 30 2.0
At2g02750.1 68415.m00218 pentatricopeptide (PPR) repeat-containi... 29 2.7
At5g37490.1 68418.m04515 U-box domain-containing protein similar... 29 4.7
At1g51980.1 68414.m05863 mitochondrial processing peptidase alph... 29 4.7
At3g01420.1 68416.m00065 pathogen-responsive alpha-dioxygenase, ... 28 6.2
>At2g25240.1 68415.m03020 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 324
Score = 59.7 bits (138), Expect = 2e-09
Identities = 28/66 (42%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Frame = +2
Query: 512 IKDLVNPDSLSS--ATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMMYKR 685
IK +++ DS+ + ++ VL NA+YFKGAWSSKFD +T DF++ ++KVP M
Sbjct: 85 IKQILSRDSIDTIRSSTLVLANAVYFKGAWSSKFDANMTKKNDFHLLDGTSVKVPFMTNY 144
Query: 686 GDYIWR 703
D R
Sbjct: 145 EDQYLR 150
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/62 (24%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +3
Query: 336 VELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDF-SKNTVAAKSINDWVEENTNNA 512
+ L +AN V++ L +F + + + + +DF SK + +N W E +TN
Sbjct: 25 LRLSIANGVWIDKFFSLKLSFKDLLENSYKATCSQVDFASKPSEVIDEVNTWAEVHTNGL 84
Query: 513 LR 518
++
Sbjct: 85 IK 86
>At3g45220.1 68416.m04880 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 393
Score = 58.4 bits (135), Expect = 5e-09
Identities = 27/62 (43%), Positives = 42/62 (67%), Gaps = 4/62 (6%)
Frame = +2
Query: 512 IKDLVNPDSLSSATAAVLV--NAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMM--Y 679
IK++++ DS+ + ++L+ NA+YFKGAWS KFD +LT DF++ +KVP M Y
Sbjct: 150 IKEILSDDSIKTIRESMLILANAVYFKGAWSKKFDAKLTKSYDFHLLDGTMVKVPFMTNY 209
Query: 680 KR 685
K+
Sbjct: 210 KK 211
>At2g26390.1 68415.m03167 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 389
Score = 56.8 bits (131), Expect = 2e-08
Identities = 24/48 (50%), Positives = 30/48 (62%)
Frame = +2
Query: 560 VLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMMYKRGDYIWR 703
+L NA+YFK AWS KFD +LT D DF++ T+KVP M D R
Sbjct: 168 ILANAVYFKAAWSRKFDAKLTKDNDFHLLDGNTVKVPFMMSYKDQYLR 215
>At2g14540.1 68415.m01628 serpin family protein / serine protease
inhibitor family protein similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 407
Score = 53.6 bits (123), Expect = 1e-07
Identities = 22/55 (40%), Positives = 36/55 (65%)
Frame = +2
Query: 512 IKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMM 676
IK+++ S++S T + NA+YFKGAW FD+ +T D+ F++ K++ VP M
Sbjct: 179 IKEILPRGSVTSLTNWIYGNALYFKGAWEKAFDKSMTRDKPFHLLNGKSVSVPFM 233
>At1g64030.1 68414.m07252 serpin family protein / serine protease
inhibitor family protein similar to phloem serpin-1
[Cucurbita maxima] GI:9937311, serpin [Triticum
aestivum] GI:871551; contains Pfam profile PF00079:
Serpin (serine protease inhibitor)
Length = 385
Score = 52.8 bits (121), Expect = 3e-07
Identities = 23/55 (41%), Positives = 33/55 (60%)
Frame = +2
Query: 512 IKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMM 676
IKDL+ S++S T + NA+ FKGAW F++ T D DFY+ ++ VP M
Sbjct: 151 IKDLLPDGSVTSLTNKIYANALSFKGAWKRPFEKYYTRDNDFYLVNGTSVSVPFM 205
Score = 34.3 bits (75), Expect = 0.095
Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 1/69 (1%)
Frame = +3
Query: 315 DLRSIKGVELKMANKVYVHDGGKLDENFAVVSRDVFNSDVQNIDF-SKNTVAAKSINDWV 491
D + G ++ AN +++ D F + + F + +DF S+ K +N WV
Sbjct: 84 DRSATGGPKITAANGLWIDKSLPTDPKFKDLFENFFKAVYVPVDFRSEAEEVRKEVNSWV 143
Query: 492 EENTNNALR 518
E +TNN ++
Sbjct: 144 EHHTNNLIK 152
>At1g51330.1 68414.m05772 serpin-related / serine protease
inhibitor-related similar to serpin [Hordeum vulgare
subsp. vulgare] CAA64599.1 GI:1197577
Length = 193
Score = 52.8 bits (121), Expect = 3e-07
Identities = 22/55 (40%), Positives = 36/55 (65%)
Frame = +2
Query: 512 IKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMM 676
IK+L+ P S+++ T + NA+YFKGAW +KF + +T + F++ K + VP M
Sbjct: 51 IKNLLPPGSVTNQTIKIYGNALYFKGAWENKFGKSMTIHKPFHLVNGKQVLVPFM 105
>At1g63280.1 68414.m07154 serpin-related / serine protease
inhibitor-related similar to protein zx [Hordeum vulgare
subsp. vulgare] GI:19071, serpin [Triticum aestivum]
GI:1885346
Length = 120
Score = 51.2 bits (117), Expect = 8e-07
Identities = 25/55 (45%), Positives = 34/55 (61%)
Frame = +2
Query: 512 IKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMM 676
I DL+ S+ S T V NA+YFKGAW +KFD+ T D +F+ K+ + VP M
Sbjct: 28 IIDLLPRGSVKSETVQVYGNALYFKGAWENKFDKSSTKDNEFHQGKE--VHVPFM 80
>At1g47710.1 68414.m05302 serpin, putative / serine protease
inhibitor, putative similar to phloem serpin-1
[Cucurbita maxima] GI:9937311; contains Pfam profile
PF00079: Serpin (serine protease inhibitor)
Length = 391
Score = 50.4 bits (115), Expect = 1e-06
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Frame = +2
Query: 512 IKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMM-YKRG 688
I +++ S S T + NA+YFKG W+ KFDE LT + +F++ + P M K+
Sbjct: 150 ITEVLPEGSADSMTKLIFANALYFKGTWNEKFDESLTQEGEFHLLDGNKVTAPFMTSKKK 209
Query: 689 DYI 697
Y+
Sbjct: 210 QYV 212
>At1g62170.1 68414.m07013 serpin family protein / serine protease
inhibitor family protein similar to phloem serpin-1
GI:9937311 from [Cucurbita maxima]; contains Pfam
profile PF00079: Serpin (serine protease inhibitor)
Length = 433
Score = 48.8 bits (111), Expect = 4e-06
Identities = 21/55 (38%), Positives = 33/55 (60%)
Frame = +2
Query: 512 IKDLVNPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMM 676
IKDL+ S++S T V +A+YFKG W K+ + +T + FY+ ++ VP M
Sbjct: 215 IKDLLPRGSVTSLTDRVYGSALYFKGTWEEKYSKSMTKCKPFYLLNGTSVSVPFM 269
>At2g35580.1 68415.m04357 serpin family protein / serine protease
inhibitor family protein similar to protein zx [Hordeum
vulgare subsp. vulgare] GI:19071, serpin [Triticum
aestivum] GI:1885350; contains Pfam profile PF00079:
Serpin (serine protease inhibitor)
Length = 374
Score = 46.0 bits (104), Expect = 3e-05
Identities = 20/50 (40%), Positives = 29/50 (58%)
Frame = +2
Query: 527 NPDSLSSATAAVLVNAIYFKGAWSSKFDERLTSDRDFYVSKDKTIKVPMM 676
NP S + T + NA++F G W S+FD LT D DF++ ++VP M
Sbjct: 157 NPKS-APLTDHIFANALFFNGRWDSQFDPSLTKDSDFHLLDGTKVRVPFM 205
>At1g33390.1 68414.m04133 helicase domain-containing protein similar
to kurz protein [Drosophila melanogaster] GI:5869803;
contains Pfam profiles PF04408: Helicase associated
domain (HA2), PF00271: Helicase conserved C-terminal
domain
Length = 1237
Score = 30.3 bits (65), Expect = 1.5
Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
Frame = +1
Query: 142 EVVKN--NPGKSVVLSAFSVLPPLAQLALASDGETHEELLKLSASL 273
E VKN +PGK VL +++L P AQL + + E E L+ ++ ++
Sbjct: 636 EQVKNKFSPGKLRVLPLYAMLSPAAQLRVFEEVEKEERLVVVATNV 681
>At1g72410.1 68414.m08374 COP1-interacting protein-related similar
to COP1-Interacting ProteinI 7 (CIP7) [Arabidopsis
thaliana] GI:3327870
Length = 1163
Score = 29.9 bits (64), Expect = 2.0
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = -2
Query: 183 REDNAFPWIIFHYFGKHSGCEVIVSIFEYIREICDG 76
R D +++F KHS CE+ VS E ++ G
Sbjct: 2 RSDTVLDYVVFELSPKHSKCELFVSSNEQTEKLASG 37
>At2g02750.1 68415.m00218 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 613
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = -2
Query: 180 EDNAFPWIIFHYFGKHSGCEVIVSIFEYIRE 88
+D F ++ +GKH CE + IFE +RE
Sbjct: 434 KDPVFWNVMISGYGKHGECESAIEIFELLRE 464
>At5g37490.1 68418.m04515 U-box domain-containing protein similar to
immediate-early fungal elicitor protein CMPG1
[Petroselinum crispum] GI:14582200; contains Pfam
profile PF04564: U-box domain
Length = 435
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = -2
Query: 207 ERRQHRKCREDNAFPWIIFHYFGKHSGCEVIVSIFEYI 94
E ++RKC +N+ W++ F K SG E + + I
Sbjct: 153 ESEKNRKCVNENSVGWVLCDCFDKFSGDEKLTFMLNEI 190
>At1g51980.1 68414.m05863 mitochondrial processing peptidase alpha
subunit, putative similar to mitochondrial processing
peptidase alpha subunit, mitochondrial precursor,
Alpha-MPP (Ubiquinol-cytochrome C reductase subunit II)
[Potato] SWISS-PROT:P29677
Length = 503
Score = 28.7 bits (61), Expect = 4.7
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = +1
Query: 208 AQLALASDGETHEELLKLSASLTTML 285
A++ LA+ G HEELLK++ LT+ L
Sbjct: 256 ARMVLAASGVEHEELLKVAEPLTSDL 281
>At3g01420.1 68416.m00065 pathogen-responsive alpha-dioxygenase,
putative similar to pathogen-inducible alpha-dioxygenase
[Nicotiana attenuata] GI:12539609; contains Pfam profile
PF03098: Animal haem peroxidase
Length = 639
Score = 28.3 bits (60), Expect = 6.2
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = +3
Query: 387 DENFAVVSRDVFNSDVQNIDFSKNTVAAKSINDWVEENTNNALRI*LIRTRSAQPQRLFS 566
DE V DV++ DV+ +D +A K I + T + + ++ TR + R F+
Sbjct: 516 DEEAIEVLDDVYDGDVEELDLLVGLMAEKKIKGFAISETAFYIFL-IMATRRLEADRFFT 574
Query: 567 S 569
S
Sbjct: 575 S 575
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,492,686
Number of Sequences: 28952
Number of extensions: 331866
Number of successful extensions: 1030
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1000
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1030
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1804564000
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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