Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20255
(790 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_13936| Best HMM Match : ABC_tran (HMM E-Value=4.6e-14) 94 1e-19
SB_27093| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_30085| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_40345| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.003
SB_16851| Best HMM Match : ABC_tran (HMM E-Value=6.1e-05) 36 0.037
SB_59051| Best HMM Match : ABC_tran (HMM E-Value=2.4e-41) 36 0.049
SB_42212| Best HMM Match : ABC_tran (HMM E-Value=0) 35 0.086
SB_34187| Best HMM Match : ABC_tran (HMM E-Value=1.49995e-41) 34 0.15
SB_1653| Best HMM Match : ABC_tran (HMM E-Value=0) 34 0.15
SB_28063| Best HMM Match : ABC_tran (HMM E-Value=0) 33 0.20
SB_17925| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.26
SB_216| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.35
SB_40695| Best HMM Match : ABC_tran (HMM E-Value=7.79963e-42) 32 0.61
SB_33165| Best HMM Match : ABC_tran (HMM E-Value=0) 32 0.61
SB_59357| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_36385| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_11108| Best HMM Match : ABC_tran (HMM E-Value=0) 31 1.4
SB_53871| Best HMM Match : ABC_tran (HMM E-Value=1.49939e-42) 30 1.9
SB_22546| Best HMM Match : ABC_tran (HMM E-Value=0) 30 1.9
SB_8906| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_35301| Best HMM Match : ABC_tran (HMM E-Value=0) 30 2.5
SB_32252| Best HMM Match : RVT_1 (HMM E-Value=9.2e-21) 30 2.5
SB_40653| Best HMM Match : ABC_tran (HMM E-Value=0) 29 3.2
SB_30376| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_46433| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_36388| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_45078| Best HMM Match : ABC_tran (HMM E-Value=2.6e-36) 29 5.7
SB_52472| Best HMM Match : ABC_tran (HMM E-Value=4.62428e-44) 28 7.5
SB_49365| Best HMM Match : ABC_tran (HMM E-Value=3.5e-38) 28 9.9
SB_55280| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.9
SB_40375| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.9
>SB_13936| Best HMM Match : ABC_tran (HMM E-Value=4.6e-14)
Length = 441
Score = 94.3 bits (224), Expect = 1e-19
Identities = 41/61 (67%), Positives = 50/61 (81%)
Frame = +1
Query: 325 ARSCTGSLAVHPRSRDIKIANFSITFYGSELLQDTLLELNCGRRYGLVGLNGCGKSSLLA 504
+R+CTG L HP S+D+KI NFSITF+G ELL D LELN GR+YGL+GLNGCGKS++L
Sbjct: 40 SRACTGVLGSHPMSKDVKIDNFSITFHGVELLTDAKLELNTGRKYGLIGLNGCGKSTMLT 99
Query: 505 A 507
A
Sbjct: 100 A 100
Score = 82.6 bits (195), Expect = 3e-16
Identities = 38/62 (61%), Positives = 48/62 (77%)
Frame = +3
Query: 486 KIIIACCLGRREVPIPEHIDIFHLTREMPASDKTALQCVMEVDEERVKLEKLAEMLAHCE 665
K + +G+RE+PIPEH DIFHLT E+ ASDKTALQCVMEVD+ER +LE+ AE L+
Sbjct: 94 KSTMLTAIGKREIPIPEHFDIFHLTSEIEASDKTALQCVMEVDKERHRLEEEAEELSKMG 153
Query: 666 DD 671
D+
Sbjct: 154 DE 155
>SB_27093| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 683
Score = 50.0 bits (114), Expect = 2e-06
Identities = 23/47 (48%), Positives = 32/47 (68%)
Frame = +1
Query: 361 RSRDIKIANFSITFYGSELLQDTLLELNCGRRYGLVGLNGCGKSSLL 501
+S+DI+I NF + + LL+ L + GRRYGLVG NG GK++LL
Sbjct: 203 KSQDIRIENFDLAYGNRSLLKGANLAIAFGRRYGLVGRNGIGKTTLL 249
>SB_30085| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 472
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Frame = +1
Query: 358 PRSRDIKIANFSITFY--GSELLQDTLLELNCGRRYGLVGLNGCGKSSLLAA 507
P ++K N S+ +Y G ++L + +++ G R G+ G G GKSSL+AA
Sbjct: 227 PAHGNVKFENVSLRYYEGGPQVLHNLNIDIKGGERVGVAGRTGAGKSSLVAA 278
>SB_40345| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1250
Score = 39.5 bits (88), Expect = 0.003
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Frame = +1
Query: 358 PRSRDIKIANFSITFY--GSELLQDTLLELNCGRRYGLVGLNGCGKSSLLAA 507
P+ + + N S+ +Y E+L+D +N R G+ G G GKSSL++A
Sbjct: 1005 PKKGAVDLVNVSLAYYPGAPEVLKDVTFSINPAERVGIAGRTGAGKSSLVSA 1056
>SB_16851| Best HMM Match : ABC_tran (HMM E-Value=6.1e-05)
Length = 113
Score = 35.9 bits (79), Expect = 0.037
Identities = 16/27 (59%), Positives = 21/27 (77%)
Frame = +2
Query: 686 LMDVYDRLDDLSADTAEARAANILHGL 766
L +V++RL++L A AE RAA ILHGL
Sbjct: 29 LTEVFERLEELDAAHAEVRAAEILHGL 55
>SB_59051| Best HMM Match : ABC_tran (HMM E-Value=2.4e-41)
Length = 474
Score = 35.5 bits (78), Expect = 0.049
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Frame = +1
Query: 358 PRSRDIKIANFSITFY--GSELLQDTLLELNCGRRYGLVGLNGCGKSSLLAA 507
P + + N S+T+ G L+D ++ G + G+VG NG GKSS++ A
Sbjct: 61 PSAGHVVCDNVSLTYEKDGLRALKDLTFSVSAGEKIGIVGRNGSGKSSVIHA 112
>SB_42212| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 301
Score = 34.7 bits (76), Expect = 0.086
Identities = 17/52 (32%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Frame = +1
Query: 358 PRSRDIKIANFSITFY--GSELLQDTLLELNCGRRYGLVGLNGCGKSSLLAA 507
P ++++ + S+ +Y GS L++ + + + G+VG G GKSSL+AA
Sbjct: 56 PDRGELRLQDVSLAYYEGGSCALEEVNVRIQAKGKVGIVGRTGAGKSSLVAA 107
>SB_34187| Best HMM Match : ABC_tran (HMM E-Value=1.49995e-41)
Length = 1515
Score = 33.9 bits (74), Expect = 0.15
Identities = 15/31 (48%), Positives = 21/31 (67%)
Frame = +1
Query: 415 LLQDTLLELNCGRRYGLVGLNGCGKSSLLAA 507
+L+D L++ G R G+VG G GKSS+ AA
Sbjct: 1351 VLRDITLDVRPGERVGIVGKTGAGKSSVFAA 1381
>SB_1653| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1702
Score = 33.9 bits (74), Expect = 0.15
Identities = 15/52 (28%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Frame = +1
Query: 358 PRSRDIKIANFSITFY--GSELLQDTLLELNCGRRYGLVGLNGCGKSSLLAA 507
P + ++ S+ +Y G +L+D + +++G+VG G GKSS++A+
Sbjct: 1461 PHDGALTFSHVSLQYYSGGPRVLKDVSFSIEPRQKFGIVGRTGAGKSSIVAS 1512
>SB_28063| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1238
Score = 33.5 bits (73), Expect = 0.20
Identities = 16/47 (34%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Frame = +1
Query: 373 IKIANFSITFY--GSELLQDTLLELNCGRRYGLVGLNGCGKSSLLAA 507
+ + + S+ ++ G+ +L+ LE+ + G+VG G GKSSL+AA
Sbjct: 995 LSVQDMSLVYHEGGARVLEGISLEVQPKEKVGIVGRTGAGKSSLVAA 1041
>SB_17925| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1075
Score = 33.1 bits (72), Expect = 0.26
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +1
Query: 418 LQDTLLELNCGRRYGLVGLNGCGKSSLLAA 507
L D LE+ ++ G+ G G GKSSLLAA
Sbjct: 850 LDDITLEITAKQKVGIAGRTGAGKSSLLAA 879
>SB_216| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1315
Score = 32.7 bits (71), Expect = 0.35
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +1
Query: 406 GSELLQDTLLELNCGRRYGLVGLNGCGKSSLLAA 507
G+ +L+ LE++ + G+VG G GKSSL+AA
Sbjct: 1088 GTRVLEGVNLEVDPKEKIGIVGRTGAGKSSLVAA 1121
>SB_40695| Best HMM Match : ABC_tran (HMM E-Value=7.79963e-42)
Length = 355
Score = 31.9 bits (69), Expect = 0.61
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Frame = +1
Query: 358 PRSRDIKIANFSITFY--GSELLQDTLLELNCGRRYGLVGLNGCGKSSLLAA 507
PR + + S+ +Y G ++L+D + ++ G+ G G GKSS++A+
Sbjct: 114 PRHGALLFNHVSLRYYKDGPQVLKDVTFSIEPQQKIGIAGRTGAGKSSIVAS 165
>SB_33165| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1310
Score = 31.9 bits (69), Expect = 0.61
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +1
Query: 418 LQDTLLELNCGRRYGLVGLNGCGKSSLLAA 507
L D LE+ +R G+ G G GKS LLAA
Sbjct: 1085 LDDITLEITAKQRVGIAGRTGAGKSFLLAA 1114
>SB_59357| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1716
Score = 31.1 bits (67), Expect = 1.1
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +1
Query: 406 GSELLQDTLLELNCGRRYGLVGLNGCGKSSLLAA 507
G E+L+ + + G++ G+VG G GKSSL+ A
Sbjct: 1184 GHEVLKRISVHIKDGQKVGVVGRTGAGKSSLVRA 1217
>SB_36385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1308
Score = 31.1 bits (67), Expect = 1.1
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = +1
Query: 358 PRSRDIKIANFSITFYGSE--LLQDTLLELNCGRRYGLVGLNGCGKSSLLAA 507
P + +IKI + + + S L+D ++ G + G+VG G GKSSL A
Sbjct: 896 PNTGNIKIDSLDLRYRESLPLALKDISCDIQPGEKIGIVGRTGAGKSSLSLA 947
>SB_11108| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1266
Score = 30.7 bits (66), Expect = 1.4
Identities = 15/34 (44%), Positives = 21/34 (61%)
Frame = +1
Query: 406 GSELLQDTLLELNCGRRYGLVGLNGCGKSSLLAA 507
G+ +L LE+ + G+VG G GKSSL+AA
Sbjct: 1038 GTRVLDGVSLEVLPKEKVGIVGRTGAGKSSLVAA 1071
>SB_53871| Best HMM Match : ABC_tran (HMM E-Value=1.49939e-42)
Length = 347
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = +1
Query: 358 PRSRDIKIANFSITFY--GSELLQDTLLELNCGRRYGLVGLNGCGKSSLLAA 507
PR + + S+ +Y G ++L+ + ++ G+ G G GKSS++A+
Sbjct: 106 PRHGAVSFSYVSLRYYSDGPQVLKGVTFSIEPQQKIGIAGRTGAGKSSIVAS 157
>SB_22546| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 844
Score = 30.3 bits (65), Expect = 1.9
Identities = 13/31 (41%), Positives = 22/31 (70%)
Frame = +1
Query: 412 ELLQDTLLELNCGRRYGLVGLNGCGKSSLLA 504
++L+ LE+N G+ LVG +GCGKS+ ++
Sbjct: 683 KVLRGLSLEVNQGQTLALVGPSGCGKSTTVS 713
Score = 28.3 bits (60), Expect = 7.5
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +1
Query: 412 ELLQDTLLELNCGRRYGLVGLNGCGKSSLL 501
++L+ L + G+ LVG +GCGKS+L+
Sbjct: 133 KVLKGLHLTIRSGQTVALVGESGCGKSTLI 162
>SB_8906| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1116
Score = 30.3 bits (65), Expect = 1.9
Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Frame = +1
Query: 358 PRSRDIKIANFSITFY--GSELLQDTLLELNCGRRYGLVGLNGCGKSSLLAA 507
PR + + S+ +Y G ++L+ + ++ G+ G G GKSS++A+
Sbjct: 900 PRHGAVSFSYVSLRYYSDGPQVLKGVTFSIEPQQKIGIAGRTGAGKSSIVAS 951
>SB_35301| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 618
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +1
Query: 358 PRSRDIKIANFSITFYGS--ELLQDTLLELNCGRRYGLVGLNGCGKSSLLA 504
P I N S +++ S E+L + + + G+VG G GKSSLL+
Sbjct: 30 PDKGKITFDNMSFSYHQSLPEVLHNVTCVIKPSEKVGVVGRTGAGKSSLLS 80
>SB_32252| Best HMM Match : RVT_1 (HMM E-Value=9.2e-21)
Length = 1033
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 415 LLQDTLLELNCGRRYGLVGLNGCGKSSLLA 504
+L+D + + + G+VG G GKSSLLA
Sbjct: 891 VLKDVSVHIKPAEKVGIVGRTGAGKSSLLA 920
>SB_40653| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 672
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +1
Query: 415 LLQDTLLELNCGRRYGLVGLNGCGKSSLLAA 507
+++ E+N G + G+VG G GKS+L A
Sbjct: 437 VIKKLTFEINSGEKIGIVGRTGAGKSTLSLA 467
>SB_30376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1758
Score = 29.1 bits (62), Expect = 4.3
Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = +1
Query: 376 KIANFSITFYGSE--LLQDTLLELNCGRRYGLVGLNGCGKSSLL 501
K+ N S + G+E L+ D L G+ + G+ GCGK+SLL
Sbjct: 1546 KLINVSYSIPGTEEPLVADLDLVFARGQNVLITGMAGCGKTSLL 1589
>SB_46433| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 29.1 bits (62), Expect = 4.3
Identities = 18/38 (47%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
Frame = +1
Query: 403 YGS---ELLQDTLLELNCGRRYGLVGLNGCGKSSLLAA 507
YGS +L D L+L R G+ G G GKSSLL A
Sbjct: 256 YGSLAKSVLSDITLKLKGSRLIGITGPCGSGKSSLLLA 293
Score = 29.1 bits (62), Expect = 4.3
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = +1
Query: 373 IKIANFSITFY--GSELLQDTLLELNCGRRYGLVGLNGCGKSSLLAA 507
I N S+++ G + L + E+ R +VG G GKSSL+AA
Sbjct: 778 ITCKNLSLSYQKEGPKALHNLYFEVKPRERISIVGKAGAGKSSLVAA 824
>SB_36388| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1570
Score = 29.1 bits (62), Expect = 4.3
Identities = 16/41 (39%), Positives = 22/41 (53%)
Frame = +1
Query: 385 NFSITFYGSELLQDTLLELNCGRRYGLVGLNGCGKSSLLAA 507
+FS G L + L + G +VG GCGKS+LL+A
Sbjct: 553 SFSWDVTGQPTLHNINLNIPDGSLVAVVGQVGCGKSTLLSA 593
Score = 28.3 bits (60), Expect = 7.5
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Frame = +1
Query: 358 PRSRDIKIANFSITFYGSE--LLQDTLLELNCGRRYGLVGLNGCGKSSLLAA 507
P I+I +F + + + +L++ +++ G + G+VG G GKS+L A
Sbjct: 1327 PDKGRIQIEDFDLRYRANLPLVLKNISVDIQPGEKIGIVGRTGAGKSTLTLA 1378
>SB_45078| Best HMM Match : ABC_tran (HMM E-Value=2.6e-36)
Length = 972
Score = 28.7 bits (61), Expect = 5.7
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +1
Query: 448 GRRYGLVGLNGCGKSSLLAA 507
G + G+VG NG KSSLLAA
Sbjct: 830 GEKVGIVGRNGLEKSSLLAA 849
>SB_52472| Best HMM Match : ABC_tran (HMM E-Value=4.62428e-44)
Length = 322
Score = 28.3 bits (60), Expect = 7.5
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +1
Query: 394 ITFYGSELLQDTLLELNCGRRYGLVGLNGCGKSSL 498
IT G ++ E+ G + G NGCGKSSL
Sbjct: 75 ITPCGDVVVSSLAFEMQPGMHLLITGPNGCGKSSL 109
>SB_49365| Best HMM Match : ABC_tran (HMM E-Value=3.5e-38)
Length = 283
Score = 27.9 bits (59), Expect = 9.9
Identities = 12/47 (25%), Positives = 27/47 (57%), Gaps = 2/47 (4%)
Frame = +1
Query: 373 IKIANFSITFY--GSELLQDTLLELNCGRRYGLVGLNGCGKSSLLAA 507
+ ++ S+ +Y G ++L+ + ++ G+ G G GKSS++A+
Sbjct: 54 VSFSHVSLRYYSDGPQVLKGVTFSVEPQQKIGVAGRTGAGKSSIVAS 100
>SB_55280| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 371
Score = 27.9 bits (59), Expect = 9.9
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +1
Query: 391 SITFYGSELLQDTLLELNCGR-RYGLVGLNGCGKSSLLAA*DAVRF 525
S+T YG+ L + + LN YG + LNG S+ L++ + V F
Sbjct: 3 SLTGYGNVSLTNAPVTLNATETNYGNISLNGTNASAALSSMETVLF 48
>SB_40375| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 380
Score = 27.9 bits (59), Expect = 9.9
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = -3
Query: 392 EKLAILISLERGCTASDPVQERASEFIFASASSLRHNASSAVSS 261
EK A S G +S + +F ASS+RHN +SS
Sbjct: 87 EKSAARHSDNAGANSSADRRREEMNVVFCGASSVRHNGGPTISS 130
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,855,658
Number of Sequences: 59808
Number of extensions: 434737
Number of successful extensions: 890
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 826
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 890
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2167838629
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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