Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20254
         (711 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7PW44 Cluster: ENSANGP00000016605; n=4; Diptera|Rep: E...    63   6e-09
UniRef50_Q9VQG1 Cluster: CG3077-PA; n=1; Drosophila melanogaster...    57   4e-07
UniRef50_UPI0000D5619C Cluster: PREDICTED: similar to CG3077-PA;...    56   9e-07
UniRef50_A3LPZ0 Cluster: Putative uncharacterized protein; n=1; ...    35   2.3  
UniRef50_Q4YVB9 Cluster: Putative uncharacterized protein; n=1; ...    33   5.2  
UniRef50_A6AK39 Cluster: Manganese transport protein MntH; n=3; ...    33   9.2  
UniRef50_Q8ID78 Cluster: Putative uncharacterized protein MAL13P...    33   9.2  
UniRef50_Q08014 Cluster: Median body protein; n=2; Giardia intes...    33   9.2  

>UniRef50_Q7PW44 Cluster: ENSANGP00000016605; n=4; Diptera|Rep:
           ENSANGP00000016605 - Anopheles gambiae str. PEST
          Length = 329

 Score = 63.3 bits (147), Expect = 6e-09
 Identities = 26/55 (47%), Positives = 41/55 (74%)
 Frame = +3

Query: 12  DLLLIYIPLLHTCINIWETLGRDKSKLVEELNDLRKRGMKVDSVPTLMEAVDTLD 176
           +LL++YIPLL TC+++W   GRD++ L E L+++ K+G+KV   PTL +A+  LD
Sbjct: 269 ELLVLYIPLLQTCLHLWWQRGRDRTLLEERLSEMGKKGIKVKGGPTLAQAIHALD 323


>UniRef50_Q9VQG1 Cluster: CG3077-PA; n=1; Drosophila
           melanogaster|Rep: CG3077-PA - Drosophila melanogaster
           (Fruit fly)
          Length = 326

 Score = 57.2 bits (132), Expect = 4e-07
 Identities = 22/55 (40%), Positives = 37/55 (67%)
 Frame = +3

Query: 12  DLLLIYIPLLHTCINIWETLGRDKSKLVEELNDLRKRGMKVDSVPTLMEAVDTLD 176
           DLL +YIPLLHTC ++W   G+D+  + + L D+ K+G+   +  +LM+A+  +D
Sbjct: 266 DLLPLYIPLLHTCAHLWWQRGQDQKPITDRLTDMSKQGINTANTESLMQAIHKID 320


>UniRef50_UPI0000D5619C Cluster: PREDICTED: similar to CG3077-PA;
           n=1; Tribolium castaneum|Rep: PREDICTED: similar to
           CG3077-PA - Tribolium castaneum
          Length = 262

 Score = 56.0 bits (129), Expect = 9e-07
 Identities = 23/56 (41%), Positives = 39/56 (69%)
 Frame = +3

Query: 9   ADLLLIYIPLLHTCINIWETLGRDKSKLVEELNDLRKRGMKVDSVPTLMEAVDTLD 176
           +DLL +Y+PLL+ CI IW   GR+K  L + L DL+++G+K++   TL++ V  ++
Sbjct: 201 SDLLELYVPLLNACITIWWQNGRNKDLLEQRLQDLKRQGVKINPQSTLLDEVKAVE 256


>UniRef50_A3LPZ0 Cluster: Putative uncharacterized protein; n=1;
           Pichia stipitis|Rep: Putative uncharacterized protein -
           Pichia stipitis (Yeast)
          Length = 845

 Score = 34.7 bits (76), Expect = 2.3
 Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
 Frame = -2

Query: 437 QPLEINLYAEDNRERG---RRFKHTLQRGY*SPYKIRLPHLNTKNNKGHFHN 291
           QPL   L A+ N+      R   H LQ+ Y SPY++    +N KN+ G  H+
Sbjct: 765 QPLNSPLVADGNKMSQISKRNLNHNLQKEYSSPYEMSPIKINLKNSSGRKHS 816


>UniRef50_Q4YVB9 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium berghei|Rep: Putative uncharacterized protein
           - Plasmodium berghei
          Length = 134

 Score = 33.5 bits (73), Expect = 5.2
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = -3

Query: 592 CVFVIFYSFLNKNKCYSYIVNSYNNIILK 506
           C+F+ FYSF N N C  +I  S N+ I++
Sbjct: 19  CIFIQFYSFCNINSCVLFIKCSLNHTIIQ 47


>UniRef50_A6AK39 Cluster: Manganese transport protein MntH; n=3;
           Vibrio|Rep: Manganese transport protein MntH - Vibrio
           harveyi HY01
          Length = 423

 Score = 32.7 bits (71), Expect = 9.2
 Identities = 18/43 (41%), Positives = 24/43 (55%)
 Frame = -2

Query: 515 YTKSNTIYLCIVILKATVR*YYIYINQPLEINLYAEDNRERGR 387
           +T S+ IYL   IL ATV  + IY++  L  N Y E  + R R
Sbjct: 204 FTDSHQIYLAAGILGATVMPHVIYLHSALFKNSYGESTKTRLR 246


>UniRef50_Q8ID78 Cluster: Putative uncharacterized protein
           MAL13P1.315; n=1; Plasmodium falciparum 3D7|Rep:
           Putative uncharacterized protein MAL13P1.315 -
           Plasmodium falciparum (isolate 3D7)
          Length = 1384

 Score = 32.7 bits (71), Expect = 9.2
 Identities = 18/37 (48%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = -3

Query: 601 ISHCVFVIFYSFL-NKNKCYSYIVNSYNNIILKAIQF 494
           I+HCVF  F  FL NKN C+S   N  N++I K   F
Sbjct: 433 INHCVFNNFLEFLYNKNNCFS--DNFINDVICKNFYF 467


>UniRef50_Q08014 Cluster: Median body protein; n=2; Giardia
           intestinalis|Rep: Median body protein - Giardia lamblia
           (Giardia intestinalis)
          Length = 857

 Score = 32.7 bits (71), Expect = 9.2
 Identities = 23/63 (36%), Positives = 32/63 (50%), Gaps = 7/63 (11%)
 Frame = +3

Query: 3   ARADLLLIYIPLLHTCINIWETLGRD-------KSKLVEELNDLRKRGMKVDSVPTLMEA 161
           A  D LL    LL T +N +     D       K +LVEELNDLR++ +K D +     A
Sbjct: 417 AEVDQLLYEKQLLKTELNSYRGTNEDIDKLTFEKRQLVEELNDLREKTIKYDQLAREKAA 476

Query: 162 VDT 170
           ++T
Sbjct: 477 LET 479


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 624,821,629
Number of Sequences: 1657284
Number of extensions: 11645502
Number of successful extensions: 28260
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 26979
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28254
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 57024798702
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)