Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20254
         (711 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    23   1.9  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    22   4.3  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   5.7  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    21   9.9  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    21   9.9  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    21   9.9  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    21   9.9  

>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -1

Query: 675 HQNLLN**CQKITYFNSIYGI 613
           HQNL N  C  I  FN  +G+
Sbjct: 212 HQNLHNKICNLIDEFNECFGL 232


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 22.2 bits (45), Expect = 4.3
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -3

Query: 604 LISHCVFVIFYSFLNKNKCYSYIVNSYNNII 512
           LI +CV VIF  +   + C +       NI+
Sbjct: 254 LIKNCVIVIFELYYLSHVCQNVSTEVIGNIL 284


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.8 bits (44), Expect = 5.7
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = -1

Query: 261 TLNHNNNDDSFKYLSV 214
           TLN  N+D+  K++S+
Sbjct: 712 TLNFRNSDELIKFISI 727


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +3

Query: 54  NIWETLGRDKSKLV 95
           N+W  LG  K KLV
Sbjct: 315 NLWVKLGTPKEKLV 328


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = -3

Query: 589 VFVIFYSFLNKNKCYSYIVNSYNNIILKAI 500
           VFV  Y F  +N+   Y++ SY  I+   I
Sbjct: 140 VFVPDYVFFVENEPILYLIFSYCPIVTTGI 169


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -1

Query: 303 TLS*LYQSWSLHFRTLNHN 247
           TL+   + W+L F+TL H+
Sbjct: 154 TLTLKRKKWNLLFKTLTHD 172


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 21.0 bits (42), Expect = 9.9
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -1

Query: 303 TLS*LYQSWSLHFRTLNHN 247
           TL+   + W+L F+TL H+
Sbjct: 80  TLTLKRKKWNLLFKTLTHD 98


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,528
Number of Sequences: 336
Number of extensions: 3556
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18843005
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)