Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20253
         (742 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q17P66 Cluster: Putative uncharacterized protein; n=1; ...   101   1e-20
UniRef50_Q29J94 Cluster: GA18158-PA; n=1; Drosophila pseudoobscu...    97   4e-19
UniRef50_O46048 Cluster: EG:133E12.4 protein; n=1; Drosophila me...    97   4e-19

>UniRef50_Q17P66 Cluster: Putative uncharacterized protein; n=1;
           Aedes aegypti|Rep: Putative uncharacterized protein -
           Aedes aegypti (Yellowfever mosquito)
          Length = 1087

 Score =  101 bits (243), Expect = 1e-20
 Identities = 45/78 (57%), Positives = 55/78 (70%)
 Frame = +3

Query: 12  TPEGWEKCNTTIQYDVETKKLWTELQRPYGNQSSFLRHLILLEKYFRSGDLVLXXXXXXX 191
           TPEGW K NTT+QYD  T+ LW +LQ+PYGNQSSFLRHL+LLEKYFR+GDL+L       
Sbjct: 490 TPEGWTKVNTTLQYDDSTRALWEDLQQPYGNQSSFLRHLVLLEKYFRNGDLILSPQAKNN 549

Query: 192 XXXXXXXXXXRLRAYDHV 245
                     RLR++D+V
Sbjct: 550 AATYSEAVQNRLRSFDNV 567



 Score = 34.7 bits (76), Expect = 2.4
 Identities = 15/30 (50%), Positives = 18/30 (60%)
 Frame = +1

Query: 646 SKPWRPTLMPITPENLARIAREPTQWRSTG 735
           SKPWRPTL+PITP +   I   P    + G
Sbjct: 754 SKPWRPTLIPITPGSAETIKAGPLYQTADG 783


>UniRef50_Q29J94 Cluster: GA18158-PA; n=1; Drosophila
            pseudoobscura|Rep: GA18158-PA - Drosophila pseudoobscura
            (Fruit fly)
          Length = 2309

 Score = 97.1 bits (231), Expect = 4e-19
 Identities = 43/77 (55%), Positives = 52/77 (67%)
 Frame = +3

Query: 12   TPEGWEKCNTTIQYDVETKKLWTELQRPYGNQSSFLRHLILLEKYFRSGDLVLXXXXXXX 191
            TPEGW +  T +QYD  T++LW ELQ+PYGNQSSFLRHLILLEKY+R+GDLVL       
Sbjct: 1641 TPEGWTRVQTFLQYDEPTRRLWEELQKPYGNQSSFLRHLILLEKYYRNGDLVLGAHASSN 1700

Query: 192  XXXXXXXXXXRLRAYDH 242
                      RL ++DH
Sbjct: 1701 ASVYTATVRQRLNSFDH 1717


>UniRef50_O46048 Cluster: EG:133E12.4 protein; n=1; Drosophila
            melanogaster|Rep: EG:133E12.4 protein - Drosophila
            melanogaster (Fruit fly)
          Length = 2342

 Score = 97.1 bits (231), Expect = 4e-19
 Identities = 43/77 (55%), Positives = 52/77 (67%)
 Frame = +3

Query: 12   TPEGWEKCNTTIQYDVETKKLWTELQRPYGNQSSFLRHLILLEKYFRSGDLVLXXXXXXX 191
            TPEGW +  T +QYD  T++LW ELQ+PYGNQSSFLRHLILLEKY+R+GDLVL       
Sbjct: 1633 TPEGWTRVQTFLQYDEPTRRLWEELQKPYGNQSSFLRHLILLEKYYRNGDLVLAPHASSN 1692

Query: 192  XXXXXXXXXXRLRAYDH 242
                      RL ++DH
Sbjct: 1693 ATVYTETVRQRLNSFDH 1709


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 694,064,195
Number of Sequences: 1657284
Number of extensions: 12605920
Number of successful extensions: 32329
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 31061
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32323
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60500186565
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)