Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20249
(813 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_01_0211 - 1601129-1601272,1601670-1602062,1602142-1602240,160... 112 4e-25
11_01_0210 - 1647922-1648065,1648459-1648851,1648930-1649028,164... 112 4e-25
08_01_0215 - 1714224-1714364,1714795-1715187,1715279-1715377,171... 111 8e-25
11_01_0676 - 5511755-5511831,5512857-5513052,5513462-5513577,551... 33 0.36
12_01_0032 - 266954-267079,267204-267245,267290-267366,267450-26... 32 0.62
11_01_0033 - 251730-251855,252068-252144,252228-252318,252644-25... 32 0.62
01_06_1014 - 33810112-33811995 31 1.1
06_01_0080 + 644021-645463 30 2.5
06_01_0349 + 2529279-2530446,2532232-2533036,2533066-2533106,253... 29 3.3
02_01_0561 + 4120268-4120339,4121462-4121588,4121715-4121770,412... 29 3.3
01_01_0703 - 5425713-5425862,5426302-5426451,5426853-5426964,542... 29 3.3
11_06_0269 - 21800104-21800655,21800824-21801370,21801398-21801513 29 5.8
11_01_0355 + 2679561-2680985,2681183-2682295 29 5.8
06_03_1442 - 30172595-30172606,30172607-30172684,30173034-301734... 29 5.8
06_03_1439 - 30157110-30157121,30157122-30157199,30157549-301579... 29 5.8
06_03_1427 - 30090464-30090475,30090476-30090553,30090903-300913... 29 5.8
06_03_1422 + 30058936-30058975,30059057-30059233,30060848-300610... 29 5.8
06_01_0486 - 3455030-3455770 29 5.8
12_02_0090 + 13493311-13494180 28 7.7
11_06_0266 - 21791757-21792982,21793154-21793178 28 7.7
03_04_0243 + 19298293-19299117 28 7.7
>12_01_0211 -
1601129-1601272,1601670-1602062,1602142-1602240,
1602920-1602988,1603071-1603328
Length = 320
Score = 112 bits (269), Expect = 4e-25
Identities = 51/80 (63%), Positives = 65/80 (81%)
Frame = +1
Query: 508 LLKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGV 687
L+K GDKVG+SE+ LL L I PFSYGLV+ VYDSG++F+PE+LD+ EDL KF +GV
Sbjct: 163 LIKKGDKVGSSESALLAKLGIRPFSYGLVITNVYDSGSVFSPEVLDLTEEDLMEKFASGV 222
Query: 688 ANVAALSLAIGYPTIASAPH 747
+ VA++SLAI YPTIA+APH
Sbjct: 223 SMVASVSLAISYPTIAAAPH 242
Score = 109 bits (263), Expect = 2e-24
Identities = 53/94 (56%), Positives = 69/94 (73%)
Frame = +2
Query: 224 HQRPPGQQSSLEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIP 403
H G + LE L+P + GNVG +FT+GDL EVR+++ + KV APAR G +AP+ VV+P
Sbjct: 69 HADNTGNKDFLE-LMPLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVAPVDVVVP 127
Query: 404 AHNTGLGPEKTSFFQALSIPTKISKGTIEIINDV 505
NTGL P +TSFFQ L+IPTKI+KGT+EII V
Sbjct: 128 PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPV 161
Score = 81.8 bits (193), Expect = 6e-16
Identities = 41/69 (59%), Positives = 48/69 (69%)
Frame = +3
Query: 39 REDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMR 218
+ KA K Y K+ QLLDEY K I ADNVGS Q+Q+IR LRG SIVLMGKNT++R
Sbjct: 4 KRTKAEKKVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGKNTLIR 63
Query: 219 KAIKDHLDN 245
+ IK H DN
Sbjct: 64 RCIKVHADN 72
>11_01_0210 -
1647922-1648065,1648459-1648851,1648930-1649028,
1649706-1649774,1649877-1650134
Length = 320
Score = 112 bits (269), Expect = 4e-25
Identities = 51/80 (63%), Positives = 65/80 (81%)
Frame = +1
Query: 508 LLKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGV 687
L+K GDKVG+SE+ LL L I PFSYGLV+ VYDSG++F+PE+LD+ EDL KF +GV
Sbjct: 163 LIKKGDKVGSSESALLAKLGIRPFSYGLVITNVYDSGSVFSPEVLDLTEEDLMEKFASGV 222
Query: 688 ANVAALSLAIGYPTIASAPH 747
+ VA++SLAI YPTIA+APH
Sbjct: 223 SMVASVSLAISYPTIAAAPH 242
Score = 109 bits (263), Expect = 2e-24
Identities = 53/94 (56%), Positives = 69/94 (73%)
Frame = +2
Query: 224 HQRPPGQQSSLEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIP 403
H G + LE L+P + GNVG +FT+GDL EVR+++ + KV APAR G +AP+ VV+P
Sbjct: 69 HADNTGNKDFLE-LMPLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVAPVDVVVP 127
Query: 404 AHNTGLGPEKTSFFQALSIPTKISKGTIEIINDV 505
NTGL P +TSFFQ L+IPTKI+KGT+EII V
Sbjct: 128 PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPV 161
Score = 81.8 bits (193), Expect = 6e-16
Identities = 41/69 (59%), Positives = 48/69 (69%)
Frame = +3
Query: 39 REDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMR 218
+ KA K Y K+ QLLDEY K I ADNVGS Q+Q+IR LRG SIVLMGKNT++R
Sbjct: 4 KRTKAEKKVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGKNTLIR 63
Query: 219 KAIKDHLDN 245
+ IK H DN
Sbjct: 64 RCIKVHADN 72
>08_01_0215 -
1714224-1714364,1714795-1715187,1715279-1715377,
1716248-1716316,1716408-1716665
Length = 319
Score = 111 bits (266), Expect = 8e-25
Identities = 50/80 (62%), Positives = 65/80 (81%)
Frame = +1
Query: 508 LLKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGV 687
L+K GDKVG+SE+ LL L I PFSYGLV+ VYDSG++F+PE+LD+ +DL KF +GV
Sbjct: 163 LIKKGDKVGSSESALLAKLGIRPFSYGLVITNVYDSGSVFSPEVLDLTEDDLMEKFASGV 222
Query: 688 ANVAALSLAIGYPTIASAPH 747
+ VA++SLAI YPTIA+APH
Sbjct: 223 SMVASVSLAISYPTIAAAPH 242
Score = 109 bits (263), Expect = 2e-24
Identities = 53/94 (56%), Positives = 69/94 (73%)
Frame = +2
Query: 224 HQRPPGQQSSLEKLLPHIKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSVVIP 403
H G + LE L+P + GNVG +FT+GDL EVR+++ + KV APAR G +AP+ VV+P
Sbjct: 69 HADNTGNKEFLE-LMPLLVGNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVAPVDVVVP 127
Query: 404 AHNTGLGPEKTSFFQALSIPTKISKGTIEIINDV 505
NTGL P +TSFFQ L+IPTKI+KGT+EII V
Sbjct: 128 PGNTGLDPSQTSFFQVLNIPTKINKGTVEIITPV 161
Score = 81.8 bits (193), Expect = 6e-16
Identities = 41/69 (59%), Positives = 48/69 (69%)
Frame = +3
Query: 39 REDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSSIVLMGKNTMMR 218
+ KA K Y K+ QLLDEY K I ADNVGS Q+Q+IR LRG SIVLMGKNT++R
Sbjct: 4 KRTKAEKKVAYDKKLCQLLDEYTKVLIAVADNVGSNQLQEIRKGLRGDSIVLMGKNTLIR 63
Query: 219 KAIKDHLDN 245
+ IK H DN
Sbjct: 64 RCIKVHADN 72
>11_01_0676 -
5511755-5511831,5512857-5513052,5513462-5513577,
5513752-5514597,5515515-5515766,5522344-5525206
Length = 1449
Score = 32.7 bits (71), Expect = 0.36
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 9/86 (10%)
Frame = +2
Query: 230 RPPGQQSSLEKL-LPH--IKGNVGFVFTRGDLVEVRDKLLENKVQAPARPGAIAPLSV-- 394
R G ++L+KL LPH ++GN+GF+ + + ++ D +L++ A P + LS
Sbjct: 394 RTLGNIAALQKLVLPHNNLEGNMGFLSSLSECRQLEDLILDHNSFVGALPDHLGNLSARL 453
Query: 395 --VIPAHN--TGLGPEKTSFFQALSI 460
I HN G PEK S +L +
Sbjct: 454 ISFIADHNKLAGSLPEKMSNLSSLEL 479
>12_01_0032 -
266954-267079,267204-267245,267290-267366,267450-267540,
267864-267924,268021-268079,268176-268266,268481-268698,
268818-268824,269013-269148,270064-270307
Length = 383
Score = 31.9 bits (69), Expect = 0.62
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +3
Query: 21 TLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSS-IVLM 197
TLS+ ++ K I ++ Y ++ DN+ +Q+++ +R L+ SS I L
Sbjct: 147 TLSKTKKKPGLERKGKVVTDIKDAVEHYANAYVFTYDNMRNQKLKDLREQLKSSSRIFLA 206
Query: 198 GKNTM 212
GK M
Sbjct: 207 GKKVM 211
>11_01_0033 -
251730-251855,252068-252144,252228-252318,252644-252704,
252800-252858,252955-253045,253238-253406,253760-253787
Length = 233
Score = 31.9 bits (69), Expect = 0.62
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Frame = +3
Query: 21 TLSRMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGSS-IVLM 197
TLS+ ++ K I ++ Y ++ DN+ +Q+++ +R L+ SS I L
Sbjct: 11 TLSKTKKKPGLERKGKVVTDIKDAVEHYANAYVFTYDNMRNQKLKDLREQLKSSSRIFLA 70
Query: 198 GKNTM 212
GK M
Sbjct: 71 GKKVM 75
>01_06_1014 - 33810112-33811995
Length = 627
Score = 31.1 bits (67), Expect = 1.1
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Frame = +3
Query: 348 KSRLQLVPVPLPHCQSSFPPTTPASVQRKPLSSKLFPSLPK--FQRVLLKSSTMYTLE 515
K R++L P+ +P + S PP PAS K L + + + +R +L++STM TL+
Sbjct: 104 KDRMKL-PLHVPVIKPSVPPLLPASSPAKLLPANVSEEWRRLEIERKILENSTMSTLQ 160
>06_01_0080 + 644021-645463
Length = 480
Score = 29.9 bits (64), Expect = 2.5
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = -3
Query: 502 IVDDFNSTL*NFGRDGKSLEERGFLWTEAGVVGGND 395
I+D N N R K++EERG L+ GV GG +
Sbjct: 100 IIDGGNEWYENTERREKAMEERGLLYLGMGVSGGEE 135
>06_01_0349 +
2529279-2530446,2532232-2533036,2533066-2533106,
2533219-2533424
Length = 739
Score = 29.5 bits (63), Expect = 3.3
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +3
Query: 318 LRSVTNCWRTKSRLQLVPVPLP 383
LR+V WR+ +RLQ +P PLP
Sbjct: 428 LRAVCRPWRSNARLQPLPPPLP 449
>02_01_0561 +
4120268-4120339,4121462-4121588,4121715-4121770,
4121841-4121912,4122017-4122128,4122247-4122284,
4122412-4122513,4122619-4122675,4122755-4122826,
4122992-4123093,4123210-4123405,4123988-4124094,
4124497-4124691,4124771-4124857,4124905-4124913,
4125599-4125703,4126067-4126164,4126250-4126328,
4126912-4127000,4127086-4127200
Length = 629
Score = 29.5 bits (63), Expect = 3.3
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +2
Query: 278 KGNVGFVFTRGDLVEV--RDKLLENKVQAPARPGAIAPLSVVIPA 406
K VG + T GDL + + L+++KV P PGA+ +S + PA
Sbjct: 145 KLGVGDIITGGDLYAIVNENTLMQHKVALP--PGAMGKISYIAPA 187
>01_01_0703 -
5425713-5425862,5426302-5426451,5426853-5426964,
5427120-5427481,5427578-5427712,5427812-5427889,
5427989-5428174,5428266-5428452,5428552-5428658,
5428732-5428806,5428885-5429040,5429165-5429437,
5429548-5429643,5429724-5429814,5429883-5430385
Length = 886
Score = 29.5 bits (63), Expect = 3.3
Identities = 14/44 (31%), Positives = 28/44 (63%)
Frame = +1
Query: 508 LLKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEI 639
L++P D VG S +++ +++ P+S VV+ +Y+S + A +I
Sbjct: 353 LIRPSD-VGGSVIHIVDHMDLEPWSVPEVVRPLYESSAMVAQKI 395
>11_06_0269 - 21800104-21800655,21800824-21801370,21801398-21801513
Length = 404
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +3
Query: 297 CSPAETSLRSVTNCWRTKSRLQLVPVPLP 383
C+ +RSV + WR + +Q P PLP
Sbjct: 82 CAAGRARVRSVCSSWRNAAAIQRPPRPLP 110
>11_01_0355 + 2679561-2680985,2681183-2682295
Length = 845
Score = 28.7 bits (61), Expect = 5.8
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +3
Query: 270 HTSRATLASCSPAETSLRSVTNCWRTKSRLQLVP 371
HTS TL+ SP+ +S+ T+C+ + + P
Sbjct: 491 HTSELTLSFSSPSPSSISGYTSCYNNNNMMSSKP 524
>06_03_1442 -
30172595-30172606,30172607-30172684,30173034-30173435,
30173503-30173577,30173667-30173822,30173952-30174143,
30174202-30174208,30175866-30175918
Length = 324
Score = 28.7 bits (61), Expect = 5.8
Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Frame = +1
Query: 508 LLKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEI--LDIKPEDLRAKFQA 681
L++P D G S +++ +++ P+S VV+ +Y+S + A +I K + LR Q
Sbjct: 116 LIRPSDG-GGSVIHIVDHMDLEPWSVPEVVRPLYESSALVAQKISMASCKIQSLRCLRQ- 173
Query: 682 GVANVAALSLAIGYPTIASAPHSIA 756
VA S+ G+ +A H+++
Sbjct: 174 -VAYKDTRSVITGWGRKLAALHALS 197
>06_03_1439 -
30157110-30157121,30157122-30157199,30157549-30157950,
30158018-30158092,30158182-30158337,30158467-30158658,
30158717-30158723,30160381-30160433
Length = 324
Score = 28.7 bits (61), Expect = 5.8
Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Frame = +1
Query: 508 LLKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEI--LDIKPEDLRAKFQA 681
L++P D G S +++ +++ P+S VV+ +Y+S + A +I K + LR Q
Sbjct: 116 LIRPSDG-GGSVIHIVDHMDLEPWSVPEVVRPLYESSALVAQKISMASCKIQSLRCLRQ- 173
Query: 682 GVANVAALSLAIGYPTIASAPHSIA 756
VA S+ G+ +A H+++
Sbjct: 174 -VAYKDTRSVITGWGRKLAALHALS 197
>06_03_1427 -
30090464-30090475,30090476-30090553,30090903-30091304,
30091372-30091446,30091536-30091691,30091821-30092012,
30093735-30093908,30094966-30095123,30096738-30096914,
30096996-30097035
Length = 487
Score = 28.7 bits (61), Expect = 5.8
Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Frame = +1
Query: 508 LLKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEI--LDIKPEDLRAKFQA 681
L++P D G S +++ +++ P+S VV+ +Y+S + A +I K + LR Q
Sbjct: 279 LIRPSDG-GGSVIHIVDHMDLEPWSVPEVVRPLYESSALVAQKISMASCKIQSLRCLRQ- 336
Query: 682 GVANVAALSLAIGYPTIASAPHSIA 756
VA S+ G+ +A H+++
Sbjct: 337 -VAYKDTRSVITGWGRKLAALHALS 360
>06_03_1422 +
30058936-30058975,30059057-30059233,30060848-30061005,
30062063-30062236,30063959-30064150,30064280-30064435,
30064525-30064599,30064667-30065068,30065418-30065495,
30065840-30066173,30066275-30066339
Length = 616
Score = 28.7 bits (61), Expect = 5.8
Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 2/85 (2%)
Frame = +1
Query: 508 LLKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEI--LDIKPEDLRAKFQA 681
L++P D G S +++ +++ P+S VV+ +Y+S + A +I K + LR Q
Sbjct: 279 LIRPSDG-GGSVIHIVDHMDLEPWSVPEVVRPLYESSALVAQKISMASCKIQSLRCLRQ- 336
Query: 682 GVANVAALSLAIGYPTIASAPHSIA 756
VA S+ G+ +A H+++
Sbjct: 337 -VAYKDTRSVITGWGRKLAALHALS 360
>06_01_0486 - 3455030-3455770
Length = 246
Score = 28.7 bits (61), Expect = 5.8
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +3
Query: 369 PVPLPHCQSSFPPTTPASVQRKPLSSKLFPSLPKF 473
P P P C S PP TP + R P + PS P +
Sbjct: 66 PPPSPRCPSCHPPYTPPT-PRPPPTPPYVPSPPPY 99
>12_02_0090 + 13493311-13494180
Length = 289
Score = 28.3 bits (60), Expect = 7.7
Identities = 24/82 (29%), Positives = 33/82 (40%), Gaps = 5/82 (6%)
Frame = +3
Query: 282 ATLASCSPAETSLRSVTNCWRTKSRLQLVPVPLPHCQSSFPPTTPASVQRKPLSSKLFPS 461
AT ++ PA S + L ++ VP P SS TT ++ P S+ S
Sbjct: 106 ATTSAPKPATASSPTKVPALSVNPILSIIGVPSPTTTSSLATTTTSTAVLFPRSTLSSAS 165
Query: 462 LPKFQR-----VLLKSSTMYTL 512
P F KSST YT+
Sbjct: 166 TPSFTTTSSPVTAPKSSTKYTV 187
>11_06_0266 - 21791757-21792982,21793154-21793178
Length = 416
Score = 28.3 bits (60), Expect = 7.7
Identities = 12/22 (54%), Positives = 13/22 (59%)
Frame = +3
Query: 318 LRSVTNCWRTKSRLQLVPVPLP 383
LRSV WR +RL P PLP
Sbjct: 41 LRSVCQAWRAAARLHRPPPPLP 62
>03_04_0243 + 19298293-19299117
Length = 274
Score = 28.3 bits (60), Expect = 7.7
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = -1
Query: 399 MTTDNGAMAPGRAGAWTLFSNSLSRTSTRSPRVNTKPTLPLMCGNSFS 256
+ TD+ + APG A A + S SRTS +P ++ PT P +S +
Sbjct: 172 VVTDSLSRAPGAAWAAAMAPTSWSRTS--APPASSSPTSPRRARSSLT 217
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,364,324
Number of Sequences: 37544
Number of extensions: 587380
Number of successful extensions: 1792
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1720
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1791
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2221181676
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -