Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20249
         (813 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    26   1.6  
X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.             24   4.8  
AF395079-1|AAK97461.1|  371|Anopheles gambiae basic helix-loop-h...    23   8.5  

>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = +2

Query: 236 PGQQSSLEKLLPHIKGNVGFVFTRGD 313
           PG+     K  P +KGNVG+   +GD
Sbjct: 723 PGRHGQTVKGEPGLKGNVGYSGDKGD 748


>X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.
          Length = 1231

 Score = 24.2 bits (50), Expect = 4.8
 Identities = 15/69 (21%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
 Frame = +1

Query: 529 VGASEATLLNMLNISPFS-YGLVVKQVYDSGT--IFAPEILDIKPEDLRAKFQAGVANVA 699
           VG +E+   +++N+  F+ Y + +  +Y +G   +     + +KPED+    +A   +  
Sbjct: 261 VGVTESA--DLINLEKFAQYAVAIAAMYKTGLGKLSEKATVKVKPEDVPLNLRAHDVSTH 318

Query: 700 ALSLAIGYP 726
           +++L+   P
Sbjct: 319 SMTLSWAPP 327


>AF395079-1|AAK97461.1|  371|Anopheles gambiae basic
           helix-loop-helix transcriptionfactor ASH protein.
          Length = 371

 Score = 23.4 bits (48), Expect = 8.5
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = +2

Query: 137 GLATDAADPYLATWLQYRAHGKKHYDAQSHQR 232
           G ATD  +  LA   Q + H  +H   Q HQ+
Sbjct: 293 GSATDNNNYILAQQQQQQHHHHQHQPQQQHQQ 324


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 934,638
Number of Sequences: 2352
Number of extensions: 19715
Number of successful extensions: 31
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 86071221
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)