BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS20247 (811 letters) Database: mosquito 2352 sequences; 563,979 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign... 25 2.1 AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript... 25 3.7 AY705401-1|AAU12510.1| 490|Anopheles gambiae nicotinic acetylch... 23 8.4 AY705400-1|AAU12509.1| 490|Anopheles gambiae nicotinic acetylch... 23 8.4 AY534996-1|AAT07394.1| 471|Anopheles gambiae XK-related b protein. 23 8.4 >AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-signaling promoter protein. Length = 1197 Score = 25.4 bits (53), Expect = 2.1 Identities = 11/25 (44%), Positives = 16/25 (64%) Frame = -3 Query: 356 PTPHARTDSYTY*PRPNPAGRRSAA 282 PTP R S+ +P+PAG ++AA Sbjct: 924 PTPFERMRSFFSRTKPSPAGGKAAA 948 >AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase protein. Length = 1222 Score = 24.6 bits (51), Expect = 3.7 Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 1/33 (3%) Frame = +1 Query: 217 SLVRMREPVFNICTDVSRCVRQ-AALRRPAGFG 312 S++R PV++ TD+ C R+ A ++RP G Sbjct: 792 SIIRYAAPVWSEATDLQWCQRKLAQVQRPLARG 824 >AY705401-1|AAU12510.1| 490|Anopheles gambiae nicotinic acetylcholine receptor subunitalpha 6 protein. Length = 490 Score = 23.4 bits (48), Expect = 8.4 Identities = 10/31 (32%), Positives = 13/31 (41%) Frame = -3 Query: 437 FIVMISFRICAQTLILYTCTTRATRILPTPH 345 F M+ R C L+T T +L PH Sbjct: 456 FAAMVVDRFCLFVFTLFTIIATVTVLLSAPH 486 >AY705400-1|AAU12509.1| 490|Anopheles gambiae nicotinic acetylcholine receptor subunitalpha 6 protein. Length = 490 Score = 23.4 bits (48), Expect = 8.4 Identities = 10/31 (32%), Positives = 13/31 (41%) Frame = -3 Query: 437 FIVMISFRICAQTLILYTCTTRATRILPTPH 345 F M+ R C L+T T +L PH Sbjct: 456 FAAMVVDRFCLFVFTLFTIIATVTVLLSAPH 486 >AY534996-1|AAT07394.1| 471|Anopheles gambiae XK-related b protein. Length = 471 Score = 23.4 bits (48), Expect = 8.4 Identities = 10/26 (38%), Positives = 15/26 (57%) Frame = +2 Query: 326 YKSPFSHAAWAVFVLLWSYMCIILVS 403 Y S +SH + V +L W M + L+S Sbjct: 372 YASVYSHWVFLVIILHWFSMFLWLIS 397 Database: mosquito Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 563,979 Number of sequences in database: 2352 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 807,551 Number of Sequences: 2352 Number of extensions: 16289 Number of successful extensions: 43 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 42 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 43 length of database: 563,979 effective HSP length: 63 effective length of database: 415,803 effective search space used: 85655418 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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