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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20247
         (811 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    25   2.1  
AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcript...    25   3.7  
AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic acetylch...    23   8.4  
AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic acetylch...    23   8.4  
AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.    23   8.4  

>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 25.4 bits (53), Expect = 2.1
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -3

Query: 356 PTPHARTDSYTY*PRPNPAGRRSAA 282
           PTP  R  S+    +P+PAG ++AA
Sbjct: 924 PTPFERMRSFFSRTKPSPAGGKAAA 948


>AB090820-2|BAC57916.1| 1222|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1222

 Score = 24.6 bits (51), Expect = 3.7
 Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
 Frame = +1

Query: 217 SLVRMREPVFNICTDVSRCVRQ-AALRRPAGFG 312
           S++R   PV++  TD+  C R+ A ++RP   G
Sbjct: 792 SIIRYAAPVWSEATDLQWCQRKLAQVQRPLARG 824


>AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 23.4 bits (48), Expect = 8.4
 Identities = 10/31 (32%), Positives = 13/31 (41%)
 Frame = -3

Query: 437 FIVMISFRICAQTLILYTCTTRATRILPTPH 345
           F  M+  R C     L+T     T +L  PH
Sbjct: 456 FAAMVVDRFCLFVFTLFTIIATVTVLLSAPH 486


>AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 23.4 bits (48), Expect = 8.4
 Identities = 10/31 (32%), Positives = 13/31 (41%)
 Frame = -3

Query: 437 FIVMISFRICAQTLILYTCTTRATRILPTPH 345
           F  M+  R C     L+T     T +L  PH
Sbjct: 456 FAAMVVDRFCLFVFTLFTIIATVTVLLSAPH 486


>AY534996-1|AAT07394.1|  471|Anopheles gambiae XK-related b protein.
          Length = 471

 Score = 23.4 bits (48), Expect = 8.4
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +2

Query: 326 YKSPFSHAAWAVFVLLWSYMCIILVS 403
           Y S +SH  + V +L W  M + L+S
Sbjct: 372 YASVYSHWVFLVIILHWFSMFLWLIS 397


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 807,551
Number of Sequences: 2352
Number of extensions: 16289
Number of successful extensions: 43
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 43
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 85655418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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