Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20245
         (728 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A6QW93 Cluster: Putative uncharacterized protein; n=1; ...    33   7.2  
UniRef50_Q8EVP0 Cluster: Putative nucleotidyl transferase; n=1; ...    33   9.5  
UniRef50_Q41FH0 Cluster: Amine oxidase precursor; n=1; Exiguobac...    33   9.5  
UniRef50_Q57738 Cluster: Uncharacterized protein MJ0290; n=1; Me...    33   9.5  

>UniRef50_A6QW93 Cluster: Putative uncharacterized protein; n=1;
           Ajellomyces capsulatus NAm1|Rep: Putative
           uncharacterized protein - Ajellomyces capsulatus NAm1
          Length = 744

 Score = 33.1 bits (72), Expect = 7.2
 Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 3/76 (3%)
 Frame = +3

Query: 144 KQLNSFNHCTIRRDYRSTPWLAPSVFMHLFCSPAASRIRSVHFAGRFAGRRCAWLVRYIS 323
           +QL+  +H T+R D R  P + P +   +  SP++  I S   +GR AG    W  R I 
Sbjct: 341 EQLSKEDHVTVR-DVRLYPGMCPRMLNEILLSPSSGGISSGSVSGR-AGAGGTW-PRDIG 397

Query: 324 MR---LF*SLDASPFA 362
           M+   L   +D SP A
Sbjct: 398 MKVWGLLHGIDPSPVA 413


>UniRef50_Q8EVP0 Cluster: Putative nucleotidyl transferase; n=1;
           Mycoplasma penetrans|Rep: Putative nucleotidyl
           transferase - Mycoplasma penetrans
          Length = 349

 Score = 32.7 bits (71), Expect = 9.5
 Identities = 16/38 (42%), Positives = 26/38 (68%), Gaps = 3/38 (7%)
 Frame = -3

Query: 726 FMDKYILL--FEIIRAIKNHKI*TGLKKI-KIVFVANK 622
           +M+KY L+  ++II AIKNH +      + KI+F+A+K
Sbjct: 268 YMEKYFLIDDYQIITAIKNHTVPQDFSTLTKIIFIADK 305


>UniRef50_Q41FH0 Cluster: Amine oxidase precursor; n=1;
           Exiguobacterium sibiricum 255-15|Rep: Amine oxidase
           precursor - Exiguobacterium sibiricum 255-15
          Length = 490

 Score = 32.7 bits (71), Expect = 9.5
 Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
 Frame = +2

Query: 452 LLHIPYLH*NFIQFYG-MVWQYPKFVSNYILQRFKNPMASEL 574
           L H+ YL  +FI   G ++ QYP+ +S  +   FKNP  +++
Sbjct: 259 LNHVDYLSVDFIVLNGDLLTQYPRLISETVRPDFKNPTPAQM 300


>UniRef50_Q57738 Cluster: Uncharacterized protein MJ0290; n=1;
           Methanocaldococcus jannaschii|Rep: Uncharacterized
           protein MJ0290 - Methanococcus jannaschii
          Length = 211

 Score = 32.7 bits (71), Expect = 9.5
 Identities = 15/32 (46%), Positives = 24/32 (75%)
 Frame = -3

Query: 720 DKYILLFEIIRAIKNHKI*TGLKKIKIVFVAN 625
           DK +++FEI++A+KN +    LKK KI++ AN
Sbjct: 134 DKIMIIFEILKAVKNKE----LKKTKIMYAAN 161


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 627,755,913
Number of Sequences: 1657284
Number of extensions: 11400467
Number of successful extensions: 28298
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 27333
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28281
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 58853922985
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)