Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20244
(797 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_03_0216 + 13870364-13870472,13871406-13871477,13871603-138716... 88 7e-18
05_01_0400 - 3159370-3159385,3159599-3159703,3159972-3160006,316... 85 8e-17
05_04_0012 + 17145112-17145205,17145681-17145752,17145832-171459... 84 1e-16
02_02_0418 + 10000744-10000840,10000952-10001023,10001786-100018... 83 2e-16
02_05_0163 + 26400486-26400621,26401477-26401646,26402623-264027... 69 3e-12
02_05_0164 + 26405052-26405208,26405304-26405473,26406278-264063... 59 4e-09
01_06_0153 - 27044553-27044669,27044842-27044964,27045066-270451... 39 0.005
06_03_0633 + 22960514-22960619,22961402-22961503,22961850-22961908 38 0.007
12_01_0945 + 9351915-9351929,9352221-9352386,9352903-9353024,935... 34 0.15
10_08_1007 - 22210263-22210400,22210506-22210547,22210626-222107... 33 0.35
07_03_1765 - 29329350-29331290,29331705-29331827,29332205-29333026 33 0.35
02_05_0679 + 30817768-30818001 31 1.1
05_03_0622 - 16293341-16293350,16293783-16294063,16294343-162944... 31 1.4
03_05_0489 - 24858483-24858637,24858811-24858921,24859013-248594... 30 2.5
01_03_0096 + 12492502-12492708,12500878-12501294,12501397-12501816 30 2.5
12_02_0391 - 18533427-18533620,18534120-18534405,18534967-185350... 29 3.2
09_04_0183 + 15389691-15390197,15391259-15391582 29 3.2
05_04_0148 - 18426903-18427106,18430516-18430594,18430752-184309... 29 3.2
02_05_0916 - 32706039-32706332,32707483-32708103,32708450-327090... 29 3.2
01_06_0695 - 31292622-31293317 29 3.2
12_02_0046 + 12830974-12832386 29 4.3
05_01_0235 - 1768049-1769634,1770695-1770815,1770965-1771033,177... 29 4.3
10_08_0760 + 20381117-20381350,20381451-20381639,20382317-20382910 29 5.7
06_03_0080 - 16320459-16320839,16321405-16321524,16321929-163220... 29 5.7
03_06_0658 - 35335639-35335731,35335814-35335871,35336213-353363... 29 5.7
03_02_0770 + 11038971-11039392,11040071-11040353,11040697-11040798 29 5.7
02_01_0072 - 502785-504038 29 5.7
04_04_1100 + 30894575-30895012,30896082-30897044 28 7.5
10_01_0112 - 1386762-1386953,1387228-1387309,1387399-1387509,138... 28 9.9
08_02_0980 + 23255992-23256408,23256480-23256517,23256606-232566... 28 9.9
06_01_0415 + 2958746-2959110,2960468-2960593,2961314-2961998 28 9.9
03_01_0515 - 3864796-3865425 28 9.9
01_06_1670 - 39007402-39008229,39008320-39008567,39009159-390093... 28 9.9
01_01_0715 - 5542648-5543219,5543352-5543544 28 9.9
>01_03_0216 +
13870364-13870472,13871406-13871477,13871603-13871668,
13871767-13871823,13871917-13871984,13872068-13872149,
13872445-13872500,13872645-13872947,13873042-13873128,
13873199-13873373,13873481-13873602,13873689-13873852,
13873925-13874179,13874312-13874433,13874542-13874663,
13875111-13875259,13875346-13875484,13875715-13875750
Length = 727
Score = 88.2 bits (209), Expect = 7e-18
Identities = 46/95 (48%), Positives = 61/95 (64%)
Frame = +3
Query: 495 TETVYAAIQGSCLGGGLETALACKYRIAVKDSKTGFGLPEVMLGLLPGGGGTQRLPALTS 674
T+ AAI G LGGGLE A+AC RI+ ++ GLPE+ LG++PG GGTQRLP L
Sbjct: 104 TKPSVAAIDGLALGGGLEVAMACHARISTPTAQ--LGLPELQLGVIPGFGGTQRLPRLVG 161
Query: 675 IPTTLDLALTGKTVKADKAKKLGIVDLLVSLLDQV 779
+ L++ L K +K +A +LG+VD LVS D V
Sbjct: 162 LTKALEMMLLSKPIKGAEAHQLGLVDSLVSADDLV 196
Score = 28.3 bits (60), Expect = 7.5
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +2
Query: 269 NVKVNSLNTQVMEEVSNIVNEIETNSGIEAAVIISGKPGCFIAGADIS 412
N VNSL+ V+ + E + ++A ++++GK G F G DIS
Sbjct: 27 NPPVNSLSIDVLLSLKENYAEALRRNDVKA-IVVTGKGGKFSGGFDIS 73
>05_01_0400 -
3159370-3159385,3159599-3159703,3159972-3160006,
3160134-3160272,3160457-3160605,3161052-3161173,
3161296-3161417,3161779-3162033,3162108-3162271,
3162311-3162489,3162593-3162767,3162916-3163002,
3163144-3163446,3163539-3163594,3163813-3163894,
3163972-3164039,3164779-3164835,3164926-3164991,
3165121-3165192,3167363-3167459
Length = 782
Score = 84.6 bits (200), Expect = 8e-17
Identities = 49/144 (34%), Positives = 82/144 (56%)
Frame = +3
Query: 333 LKQILVLKLQSLYQASLDASLQGLI*A*SKTAKQRKKLSVCLKEDMKYSEESTITETVYA 512
+K I+V ++ LD + G I + ++ K+ + M + E+ +V A
Sbjct: 50 VKAIVVTGKGGVFSGGLDINTFGAI---QRNKAEQLKVDYVSIDVMTNTLEAAGKPSV-A 105
Query: 513 AIQGSCLGGGLETALACKYRIAVKDSKTGFGLPEVMLGLLPGGGGTQRLPALTSIPTTLD 692
AI G LGGGLE ++ C+ RI++ ++ GLPE+ LG++P GGTQRLP L + L+
Sbjct: 106 AINGPALGGGLEISMVCQARISIPTAQ--LGLPELQLGVIPAFGGTQRLPRLVGLTKALE 163
Query: 693 LALTGKTVKADKAKKLGIVDLLVS 764
+ L K +KA++A +L ++D +VS
Sbjct: 164 MMLMSKPIKAEEAHQLALIDAIVS 187
>05_04_0012 +
17145112-17145205,17145681-17145752,17145832-17145911,
17146059-17146175,17146282-17146363,17147086-17147141,
17147258-17147560,17147658-17147744,17148118-17148292,
17148370-17148491,17149028-17149191,17149277-17149531,
17150419-17150540,17150656-17150777,17151302-17151450,
17151565-17151703,17151831-17151866
Length = 724
Score = 84.2 bits (199), Expect = 1e-16
Identities = 40/85 (47%), Positives = 55/85 (64%)
Frame = +3
Query: 510 AAIQGSCLGGGLETALACKYRIAVKDSKTGFGLPEVMLGLLPGGGGTQRLPALTSIPTTL 689
AAI G LGGGLE + C R++ ++ GLPE+ LG++PG GGTQRLP L +P L
Sbjct: 106 AAIDGVALGGGLELVMVCHARVSTSSAQ--LGLPELQLGIIPGLGGTQRLPRLVGLPKAL 163
Query: 690 DLALTGKTVKADKAKKLGIVDLLVS 764
++ L K +K +A K G+VD +VS
Sbjct: 164 EMLLMSKPLKGVEAHKFGLVDAVVS 188
>02_02_0418 +
10000744-10000840,10000952-10001023,10001786-10001848,
10001952-10002008,10002159-10002226,10002327-10002408,
10002517-10002572,10002934-10003236,10003638-10003724,
10004454-10004628,10004813-10004934,10005171-10005334,
10006201-10006455,10006979-10007100,10007220-10007341,
10007452-10007600,10007649-10007652
Length = 665
Score = 83.4 bits (197), Expect = 2e-16
Identities = 40/85 (47%), Positives = 56/85 (65%)
Frame = +3
Query: 510 AAIQGSCLGGGLETALACKYRIAVKDSKTGFGLPEVMLGLLPGGGGTQRLPALTSIPTTL 689
AAIQG LGGGLE + C RI+ +++ GLPE+ LG++PG GGTQRLP L +P +
Sbjct: 104 AAIQGLALGGGLELTMGCHARISTPEAQ--LGLPELTLGIIPGFGGTQRLPRLVGLPKAI 161
Query: 690 DLALTGKTVKADKAKKLGIVDLLVS 764
++ L K + A + K+ G+VD L S
Sbjct: 162 EMMLQSKFITAKEGKEGGLVDALCS 186
>02_05_0163 +
26400486-26400621,26401477-26401646,26402623-26402713,
26402822-26402873,26403462-26403565,26403648-26403724,
26403890-26404069
Length = 269
Score = 69.3 bits (162), Expect = 3e-12
Identities = 34/84 (40%), Positives = 50/84 (59%)
Frame = +3
Query: 510 AAIQGSCLGGGLETALACKYRIAVKDSKTGFGLPEVMLGLLPGGGGTQRLPALTSIPTTL 689
A I+G+ LGGGLE AL+C RI +++ GLPE L ++PG GGTQRLP +
Sbjct: 110 AVIEGAALGGGLELALSCDLRICGENAT--LGLPETGLAIIPGAGGTQRLPRIVGRSRAK 167
Query: 690 DLALTGKTVKADKAKKLGIVDLLV 761
++ TG+ A +A +G+ + V
Sbjct: 168 EMIFTGRRCNATEAVMMGLANYCV 191
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/54 (31%), Positives = 32/54 (59%)
Frame = +2
Query: 257 LDSPNVKVNSLNTQVMEEVSNIVNEIETNSGIEAAVIISGKPGCFIAGADISMI 418
L+ P VK N++N + M + +V ++E + ++ ++ S PG F AGAD+ +
Sbjct: 52 LERPEVK-NAINWEAMRLLRGVVEKVEADDTVKVVLVTSSVPGVFCAGADLKAL 104
>02_05_0164 +
26405052-26405208,26405304-26405473,26406278-26406352,
26406570-26406660,26406768-26406848,26407192-26407353,
26407425-26407501,26407670-26407846
Length = 329
Score = 59.3 bits (137), Expect = 4e-09
Identities = 43/129 (33%), Positives = 63/129 (48%), Gaps = 15/129 (11%)
Frame = +3
Query: 429 KQRKKLSVCLKEDMKYSEEST------ITETVYAAIQGSCLGGGLETALACKYRIAVKDS 590
K+R+ +S C + S ST ++ A ++G+ GGGLE AL+C RI +++
Sbjct: 109 KERRLMSPCEVREFVNSLRSTFLSFEALSIPTIAIVEGAAFGGGLELALSCDLRICGENA 168
Query: 591 KTGFGLPEVMLGLLPG---------GGGTQRLPALTSIPTTLDLALTGKTVKADKAKKLG 743
F LPE L ++PG GGTQRLP + +L TG+ A +A +G
Sbjct: 169 T--FSLPETGLAIIPGYVFKMALYFSGGTQRLPRIVGKSRAKELIFTGRRFDAVEAVTMG 226
Query: 744 IVDLLVSLL 770
V L S L
Sbjct: 227 KVGLAPSFL 235
>01_06_0153 -
27044553-27044669,27044842-27044964,27045066-27045161,
27045323-27045370,27046360-27046458,27046554-27046592,
27047032-27047133,27047225-27047347,27047535-27047783
Length = 331
Score = 38.7 bits (86), Expect = 0.005
Identities = 25/94 (26%), Positives = 44/94 (46%)
Frame = +3
Query: 492 ITETVYAAIQGSCLGGGLETALACKYRIAVKDSKTGFGLPEVMLGLLPGGGGTQRLPALT 671
+ + V A + G +GGG + C IA ++ G P+V G G GT + L
Sbjct: 164 LPKPVIAMVAGYAVGGGHVLHMVCDLTIAADNAIFGQTGPKV--GSFDAGYGTSIMSRLV 221
Query: 672 SIPTTLDLALTGKTVKADKAKKLGIVDLLVSLLD 773
++ + AD+A ++G+V+++V L D
Sbjct: 222 GPKKAREMWFLSRFYTADEADRMGLVNVVVPLAD 255
>06_03_0633 + 22960514-22960619,22961402-22961503,22961850-22961908
Length = 88
Score = 38.3 bits (85), Expect = 0.007
Identities = 18/66 (27%), Positives = 34/66 (51%)
Frame = +2
Query: 257 LDSPNVKVNSLNTQVMEEVSNIVNEIETNSGIEAAVIISGKPGCFIAGADISMIENCKTK 436
LD P +N++N ++ ++E ETN ++ ++ S P F AG D+ + N T
Sbjct: 24 LDRPKA-LNAMNLEMDLRYKAFLDEWETNPSVKCVLVESSSPRAFSAGGDVKRLANDCTM 82
Query: 437 EEVVSL 454
E++ +
Sbjct: 83 PEIIEV 88
>12_01_0945 +
9351915-9351929,9352221-9352386,9352903-9353024,
9353098-9353214,9356997-9357077,9357204-9357272,
9357727-9357790,9357988-9358067,9358164-9358247,
9358418-9358502,9359658-9359743,9359924-9360045,
9360841-9360901,9360981-9361166,9363622-9363723,
9363803-9363844,9363949-9364086
Length = 539
Score = 33.9 bits (74), Expect = 0.15
Identities = 27/85 (31%), Positives = 43/85 (50%)
Frame = +3
Query: 486 STITETVYAAIQGSCLGGGLETALACKYRIAVKDSKTGFGLPEVMLGLLPGGGGTQRLPA 665
+T ++ + + G +GGG ++ ++R+ V DS T F +PE LGL P G + L
Sbjct: 232 ATYSKPQVSLLTGIVMGGGAGVSIHGRFRV-VTDS-TVFAMPETALGLFPDIGASYFLSR 289
Query: 666 LTSIPTTLDLALTGKTVKADKAKKL 740
L + LTG V+ D A+ L
Sbjct: 290 LLGFYGEY-VGLTG--VRLDAAEML 311
>10_08_1007 -
22210263-22210400,22210506-22210547,22210626-22210727,
22212239-22212337,22212413-22212473,22213311-22213432,
22217700-22217786,22217958-22218041,22218141-22218220,
22218404-22218467,22218904-22218972,22219099-22219179,
22219626-22219694,22220108-22220140
Length = 376
Score = 32.7 bits (71), Expect = 0.35
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 3/92 (3%)
Frame = +3
Query: 486 STITETVYAAIQGSCLGGGLETALACKYRIAVKDSKTGFGLPEVMLGLLPGGGGT---QR 656
+T + + + G +GGG ++ ++R+ + T F +PE LGL P G + R
Sbjct: 126 ATYNKPQVSLLTGIVMGGGAGVSIHGRFRVVTES--TVFAMPETALGLFPDIGASYFLSR 183
Query: 657 LPALTSIPTTLDLALTGKTVKADKAKKLGIVD 752
LP L+ +L K +D GI+D
Sbjct: 184 LPGFYVRLALLEESLK-KVDTSDPFAICGIID 214
>07_03_1765 - 29329350-29331290,29331705-29331827,29332205-29333026
Length = 961
Score = 32.7 bits (71), Expect = 0.35
Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Frame = +2
Query: 350 IEAAVIISGKPGCFIAGADISMIENCKTKEEVVSL--SKRGHEIFRRIDNHGNRICRNTR 523
+ A + G G F G D S + NC K V+ L S+RG E ID+ CRN
Sbjct: 572 VGATDCVYGAQGAFYKGLDFSKVLNCDRKPAVLDLPPSRRGDEDIGGIDH----CCRNGT 627
Query: 524 QLSR 535
L +
Sbjct: 628 MLPK 631
>02_05_0679 + 30817768-30818001
Length = 77
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = -2
Query: 664 AGNLCVPPPPGKSPNMTSGSPNPVLESFTAMRYLHARAVSNPP 536
+GN+ +PPPP SP+ T G P LE +Y + +SN P
Sbjct: 37 SGNIALPPPP--SPHWTGGHRLPPLE----QKYSRSCPISNDP 73
>05_03_0622 -
16293341-16293350,16293783-16294063,16294343-16294474,
16294561-16294741,16295054-16295096,16295183-16295249,
16296708-16296834,16296985-16297620,16298253-16298761,
16298842-16299157,16299615-16300053,16300128-16300353,
16300441-16300625,16300839-16300950,16301459-16301495,
16301977-16302011,16302497-16302810,16303463-16303475
Length = 1220
Score = 30.7 bits (66), Expect = 1.4
Identities = 18/59 (30%), Positives = 28/59 (47%)
Frame = -2
Query: 775 WSKRETNRSTIPNFFALSAFTVLPVRARSKVVGMEVRAGNLCVPPPPGKSPNMTSGSPN 599
WS+R T+ S PN + +++ ARS + G++ PPPP S + S N
Sbjct: 56 WSRRPTSPSA-PNLLRAAPLSLVSATARSLLACRREGIGSVRPPPPPPLSRTQRAISHN 113
>03_05_0489 -
24858483-24858637,24858811-24858921,24859013-24859421,
24859746-24859800,24860042-24860318,24860442-24860562,
24860831-24861438,24861552-24861741
Length = 641
Score = 29.9 bits (64), Expect = 2.5
Identities = 16/40 (40%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Frame = -2
Query: 643 PPPGKSPNMTSGSPN--PVLESFTAMRYLHARAVSNPPPR 530
PPPGK + +G PN L +T +RY A+ PPP+
Sbjct: 551 PPPGKYYVVDAGYPNRPGYLSPYTRIRYHVAQWNDGPPPQ 590
>01_03_0096 + 12492502-12492708,12500878-12501294,12501397-12501816
Length = 347
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +2
Query: 335 ETNSGIEAAVIISGKPGCFIAGADISMIENCKTKEEVV--SLSKRGHEI 475
+ NSG+ A +I CF+ G D S++ N T E + S RG E+
Sbjct: 49 KNNSGVAAGLIRLHFHDCFVRGCDASVLINGSTTERSAGPNASLRGFEV 97
>12_02_0391 -
18533427-18533620,18534120-18534405,18534967-18535028,
18535526-18535613
Length = 209
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +3
Query: 708 KTVKADKAKKLGIVDLLVSLLDQVWVSL 791
K +KA+ KKL V+L +SL D WVS+
Sbjct: 53 KELKANTRKKLQGVELSLSLYDTAWVSM 80
>09_04_0183 + 15389691-15390197,15391259-15391582
Length = 276
Score = 29.5 bits (63), Expect = 3.2
Identities = 15/52 (28%), Positives = 31/52 (59%)
Frame = +2
Query: 449 SLSKRGHEIFRRIDNHGNRICRNTRQLSRRWIRDCSCM*ISHCCERLQNRIW 604
++S RG++ +R + ++ N + + S+ W R SC+ S C++LQ++ W
Sbjct: 106 AVSGRGYKEYR-LGDYSNWLQKRMEN-SKNWNRIRSCLQDSKVCKKLQDKNW 155
>05_04_0148 -
18426903-18427106,18430516-18430594,18430752-18430935,
18431020-18431063,18432028-18432165,18432713-18434511
Length = 815
Score = 29.5 bits (63), Expect = 3.2
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = -2
Query: 523 PCIAAYTVSVIVDSSEYFMSSFRQTDNFFLCFAV 422
PC+ A VS++ + YF++ R T F CFA+
Sbjct: 487 PCLLA--VSLLFSAPVYFLAGLRATTQAFACFAL 518
>02_05_0916 -
32706039-32706332,32707483-32708103,32708450-32709070,
32709183-32709752,32709840-32709918,32710002-32710075,
32711336-32711398
Length = 773
Score = 29.5 bits (63), Expect = 3.2
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = -2
Query: 721 AFTVLPVRARSKVVGMEVRAGNLCVPPPPGKSPNMTSGSPNP-VLESFTAMRYLHARAVS 545
AF+V P ++V+G+++ N CV GK+P + S S A R V
Sbjct: 44 AFSVKPTG--NEVIGIDLGTTNSCVSVMEGKNPKVIENSEGTRTTPSVVAFNQKGERLVG 101
Query: 544 NPPPRQ 527
P RQ
Sbjct: 102 TPAKRQ 107
>01_06_0695 - 31292622-31293317
Length = 231
Score = 29.5 bits (63), Expect = 3.2
Identities = 15/41 (36%), Positives = 20/41 (48%)
Frame = -2
Query: 643 PPPGKSPNMTSGSPNPVLESFTAMRYLHARAVSNPPPRQLP 521
P P + PN S S + S T+ + H RA P PR +P
Sbjct: 10 PMPQQDPNSPSSSTSSSSSSSTSPSHPHHRAPLPPSPRPVP 50
>12_02_0046 + 12830974-12832386
Length = 470
Score = 29.1 bits (62), Expect = 4.3
Identities = 22/72 (30%), Positives = 30/72 (41%), Gaps = 5/72 (6%)
Frame = -2
Query: 652 CVPPPPGKSP---NMTSGSPNPVLESFTAMRYLHA--RAVSNPPPRQLPCIAAYTVSVIV 488
CVPPPP +P + + P ++ F HA PPP P I +Y + +
Sbjct: 314 CVPPPPRPAPPSRRVMAPLPPYPMDPFETPPSPHAPRHDPFEPPPSPDPPIQSYAIDPPI 373
Query: 487 DSSEYFMSSFRQ 452
S Y M F Q
Sbjct: 374 QS--YAMDPFEQ 383
>05_01_0235 -
1768049-1769634,1770695-1770815,1770965-1771033,
1771199-1771323,1771613-1771712,1771806-1771910,
1772559-1772657,1772751-1772867
Length = 773
Score = 29.1 bits (62), Expect = 4.3
Identities = 22/84 (26%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Frame = -3
Query: 582 SQQCDIYMQEQSLIHLLDSCLVLRHIRFP*LSILLNISCPLLDRLTTSSFVLQFSIMLIS 403
S+ D+Y +E ++ +LD C ++ H+ +++ + P L T +Q S+ LI
Sbjct: 389 SEDVDMYAEEFIMMLVLDGCFIIEHL----VNVAIGRDEPSLH--ATPFAPVQLSVDLIL 442
Query: 402 AP-AMKHPGLPDIMTAASIPEFVS 334
A + L D++ +PEF S
Sbjct: 443 AENQIPFFVLVDLVRITDLPEFAS 466
>10_08_0760 + 20381117-20381350,20381451-20381639,20382317-20382910
Length = 338
Score = 28.7 bits (61), Expect = 5.7
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 5/76 (6%)
Frame = +2
Query: 299 VMEEVSNIVNEIETNSGIEAAVIISGKPGCFIAGADIS-MIENCK----TKEEVVSLSKR 463
V +EVS V+ N G+ A ++ CF+ G D S +I++ K K+ + S R
Sbjct: 49 VQQEVSKAVS---ANPGLAAGLVRLHFHDCFVRGCDASVLIDSTKGNQAEKDAGPNTSLR 105
Query: 464 GHEIFRRIDNHGNRIC 511
G E+ RI + C
Sbjct: 106 GFEVVDRIKARVEQAC 121
>06_03_0080 -
16320459-16320839,16321405-16321524,16321929-16322072,
16322493-16322544,16323009-16323100,16323912-16324014,
16324237-16324300,16324559-16324973
Length = 456
Score = 28.7 bits (61), Expect = 5.7
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = -2
Query: 718 FTVLPVRARSKVVGMEVRAGNLCVPPPPGKSPNMTSGSP 602
FT P R+ V + + +PPPP SP++ SP
Sbjct: 25 FTSSPARSGKVAVQPKQVTIRVFLPPPPSSSPSLAGNSP 63
>03_06_0658 -
35335639-35335731,35335814-35335871,35336213-35336355,
35336624-35336703,35336916-35337075,35337531-35337668,
35338487-35338567,35338640-35338693,35339192-35339297,
35339615-35339682,35340076-35340225,35340401-35340519,
35341151-35341362,35342118-35342205,35342365-35342479,
35343083-35343274,35343809-35344018
Length = 688
Score = 28.7 bits (61), Expect = 5.7
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +1
Query: 613 KSCWDFCPAVEGHRDYLLSPPY 678
K+ WDF PAV G R + PP+
Sbjct: 314 KNLWDFVPAVPGDRFLSMLPPW 335
>03_02_0770 + 11038971-11039392,11040071-11040353,11040697-11040798
Length = 268
Score = 28.7 bits (61), Expect = 5.7
Identities = 12/48 (25%), Positives = 28/48 (58%)
Frame = +2
Query: 278 VNSLNTQVMEEVSNIVNEIETNSGIEAAVIISGKPGCFIAGADISMIE 421
+N+L +M ++ ++ + G+ AAV+++G+ F +G D++ E
Sbjct: 34 LNALTRPMMVSLAAAFRRLDADDGV-AAVVLAGRGRAFCSGVDLTAAE 80
>02_01_0072 - 502785-504038
Length = 417
Score = 28.7 bits (61), Expect = 5.7
Identities = 27/109 (24%), Positives = 42/109 (38%)
Frame = -2
Query: 700 RARSKVVGMEVRAGNLCVPPPPGKSPNMTSGSPNPVLESFTAMRYLHARAVSNPPPRQLP 521
RAR + + A L P P V ++++ R++HA A PP Q P
Sbjct: 154 RARRAISRLFPDAAKLAAAPSPSCRAGPARALSFSVSRNWSSGRHVHAMAAHLAPPPQSP 213
Query: 520 CIAAYTVSVIVDSSEYFMSSFRQTDNFFLCFAVFDHAYISPCNEASRLA 374
A+ + + Y MSS L F+++ PC + S A
Sbjct: 214 TSASPGAGCGLGLALYTMSS-------VLVFSMWALVAAVPCQDRSSAA 255
>04_04_1100 + 30894575-30895012,30896082-30897044
Length = 466
Score = 28.3 bits (60), Expect = 7.5
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = -2
Query: 613 SGSPNPVLESFTAMRY-LHARAVSNPPPRQLPCIAAYTV 500
+G LE+FTA + LHARA ++PP + C V
Sbjct: 255 AGPGRTKLEAFTAHLWQLHARAAASPPRHRRSCCMGVVV 293
>10_01_0112 -
1386762-1386953,1387228-1387309,1387399-1387509,
1387590-1387841,1387927-1388348,1388430-1390160,
1390251-1390448
Length = 995
Score = 27.9 bits (59), Expect = 9.9
Identities = 23/73 (31%), Positives = 30/73 (41%), Gaps = 7/73 (9%)
Frame = -2
Query: 643 PPPGKSPNMTSGSPNPVLESFTAMRYLHAR------AVSNPPPRQLPCIAAYTVSVIVDS 482
PPP S +P PV S T+ HA S P P+ I+ Y I
Sbjct: 597 PPPSPSQQPPLPTPQPVQASPTSPTKQHAPPAPPSVQTSPPTPQSALLISTYDPKEIDKD 656
Query: 481 SEYFM-SSFRQTD 446
E FM S+FR ++
Sbjct: 657 KEKFMFSAFRNSE 669
>08_02_0980 +
23255992-23256408,23256480-23256517,23256606-23256654,
23256787-23256848,23256876-23256938,23256939-23257599
Length = 429
Score = 27.9 bits (59), Expect = 9.9
Identities = 17/61 (27%), Positives = 21/61 (34%)
Frame = -2
Query: 700 RARSKVVGMEVRAGNLCVPPPPGKSPNMTSGSPNPVLESFTAMRYLHARAVSNPPPRQLP 521
R R + M R+ P P SP P P LE + +PPP P
Sbjct: 290 RVRRPCLNMRPRSPRRSSSPAPPPSPRRILRRPRPTLELVAGAVSI---TTQDPPPSMRP 346
Query: 520 C 518
C
Sbjct: 347 C 347
>06_01_0415 + 2958746-2959110,2960468-2960593,2961314-2961998
Length = 391
Score = 27.9 bits (59), Expect = 9.9
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = -2
Query: 679 GMEVRAGNLCVPPPPGKSPNMTSGSPNPVLESFTAMRYLHARAVSNPPP 533
G++V L PPPP P T+ + F +M HA PPP
Sbjct: 237 GLKVETNGLAPPPPP--PPTTTTNFHDDQHFCFPSMPPFHAGVGPPPPP 283
>03_01_0515 - 3864796-3865425
Length = 209
Score = 27.9 bits (59), Expect = 9.9
Identities = 14/42 (33%), Positives = 17/42 (40%)
Frame = -2
Query: 646 PPPPGKSPNMTSGSPNPVLESFTAMRYLHARAVSNPPPRQLP 521
PPP P++TS P P S+PPP LP
Sbjct: 48 PPPLAPPPSVTSSPPPPAAGPLMPPPPPPPSVTSSPPPPPLP 89
>01_06_1670 -
39007402-39008229,39008320-39008567,39009159-39009364,
39009454-39011054
Length = 960
Score = 27.9 bits (59), Expect = 9.9
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -2
Query: 664 AGNLCVPPPPGKSPNMTSGSPNPVLESFTAMR 569
A L PPPP + P S +P++E+ +A+R
Sbjct: 364 APTLPPPPPPRRKPPSPSPPSSPLIENTSALR 395
>01_01_0715 - 5542648-5543219,5543352-5543544
Length = 254
Score = 27.9 bits (59), Expect = 9.9
Identities = 21/57 (36%), Positives = 26/57 (45%)
Frame = -2
Query: 700 RARSKVVGMEVRAGNLCVPPPPGKSPNMTSGSPNPVLESFTAMRYLHARAVSNPPPR 530
RA S V AG+ PPPP N T+ SP + +FTA + PPPR
Sbjct: 173 RAPSPPVPAPAPAGSPPPPPPPPAGGNFTAPSPAGGM-NFTAPA-PGTNGTAAPPPR 227
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,680,195
Number of Sequences: 37544
Number of extensions: 456648
Number of successful extensions: 1851
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1715
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1830
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2162420256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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