Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20240
(788 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. 30 0.024
AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein. 30 0.024
AM292366-1|CAL23178.2| 379|Tribolium castaneum gustatory recept... 25 0.52
AM292329-1|CAL23141.2| 379|Tribolium castaneum gustatory recept... 25 0.52
AF422804-1|AAL56571.1| 669|Tribolium castaneum ABC transmembran... 23 3.7
U09586-2|AAC47271.1| 712|Tribolium castaneum protease, reverse ... 22 6.4
DQ342040-1|ABC69932.1| 822|Tribolium castaneum STIP protein. 22 6.4
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 21 8.5
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 21 8.5
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 21 8.5
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 21 8.5
>AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein.
Length = 790
Score = 29.9 bits (64), Expect = 0.024
Identities = 22/59 (37%), Positives = 32/59 (54%)
Frame = +2
Query: 146 PLDLTELNIEKLPIQFVAPYHSDEYHEVLRHESDLPHQYPVSLSLHHKSTWSCRKEKVT 322
PL+LT I+K+PI VAP+ E ++ +HE DLP + LS ++ K K T
Sbjct: 265 PLNLT---IKKMPIAIVAPFTIVE-PKLNKHE-DLPQDLSMKLSKNNDQCLDLSKTKET 318
>AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein.
Length = 682
Score = 29.9 bits (64), Expect = 0.024
Identities = 22/59 (37%), Positives = 32/59 (54%)
Frame = +2
Query: 146 PLDLTELNIEKLPIQFVAPYHSDEYHEVLRHESDLPHQYPVSLSLHHKSTWSCRKEKVT 322
PL+LT I+K+PI VAP+ E ++ +HE DLP + LS ++ K K T
Sbjct: 157 PLNLT---IKKMPIAIVAPFTIVE-PKLNKHE-DLPQDLSMKLSKNNDQCLDLSKTKET 210
>AM292366-1|CAL23178.2| 379|Tribolium castaneum gustatory receptor
candidate 45 protein.
Length = 379
Score = 25.4 bits (53), Expect = 0.52
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -2
Query: 211 TVVWCHKLNRQFFNV*LSQVKRRLF 137
T+ WC+KL QF V S+V+ LF
Sbjct: 308 TISWCYKLQEQF--VTNSEVRTELF 330
>AM292329-1|CAL23141.2| 379|Tribolium castaneum gustatory receptor
candidate 8 protein.
Length = 379
Score = 25.4 bits (53), Expect = 0.52
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = -2
Query: 211 TVVWCHKLNRQFFNV*LSQVKRRLF 137
T+ WC+KL QF V S+V+ LF
Sbjct: 308 TISWCYKLQEQF--VTNSEVRTELF 330
>AF422804-1|AAL56571.1| 669|Tribolium castaneum ABC transmembrane
transporter white protein.
Length = 669
Score = 22.6 bits (46), Expect = 3.7
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -2
Query: 649 CYFQLVSNKHLFLFFI 602
CYF + N H F F+I
Sbjct: 513 CYFMIGLNSHGFRFYI 528
>U09586-2|AAC47271.1| 712|Tribolium castaneum protease, reverse
transcriptase andRNase H protein.
Length = 712
Score = 21.8 bits (44), Expect = 6.4
Identities = 11/37 (29%), Positives = 16/37 (43%)
Frame = +2
Query: 215 EYHEVLRHESDLPHQYPVSLSLHHKSTWSCRKEKVTF 325
EY + L H+Y + LH K+ + R V F
Sbjct: 279 EYRCIFSLRPGLTHKYTHEIKLHDKTPFLKRPYPVPF 315
>DQ342040-1|ABC69932.1| 822|Tribolium castaneum STIP protein.
Length = 822
Score = 21.8 bits (44), Expect = 6.4
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +1
Query: 262 SRQPLTSSQEYLELQKRESDI 324
S PLT+ ++Y+E+ R DI
Sbjct: 430 SWSPLTNPKQYMEIFARWKDI 450
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.4 bits (43), Expect = 8.5
Identities = 10/48 (20%), Positives = 21/48 (43%)
Frame = +2
Query: 161 ELNIEKLPIQFVAPYHSDEYHEVLRHESDLPHQYPVSLSLHHKSTWSC 304
E +++ + + DEY+E + + +D V S H ++C
Sbjct: 519 EADVKTEDLDEIQKEKGDEYYETISNHTDASSAKAVKNSDHITRIYAC 566
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.4 bits (43), Expect = 8.5
Identities = 10/48 (20%), Positives = 21/48 (43%)
Frame = +2
Query: 161 ELNIEKLPIQFVAPYHSDEYHEVLRHESDLPHQYPVSLSLHHKSTWSC 304
E +++ + + DEY+E + + +D V S H ++C
Sbjct: 519 EADVKTEDLDEIQKEKGDEYYETISNHTDASSAKAVKNSDHITRIYAC 566
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 21.4 bits (43), Expect = 8.5
Identities = 10/48 (20%), Positives = 21/48 (43%)
Frame = +2
Query: 161 ELNIEKLPIQFVAPYHSDEYHEVLRHESDLPHQYPVSLSLHHKSTWSC 304
E +++ + + DEY+E + + +D V S H ++C
Sbjct: 519 EADVKTEDLDEIQKEKGDEYYETISNHTDASSAKAVKNSDHITRIYAC 566
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 21.4 bits (43), Expect = 8.5
Identities = 10/48 (20%), Positives = 21/48 (43%)
Frame = +2
Query: 161 ELNIEKLPIQFVAPYHSDEYHEVLRHESDLPHQYPVSLSLHHKSTWSC 304
E +++ + + DEY+E + + +D V S H ++C
Sbjct: 519 EADVKTEDLDEIQKEKGDEYYETISNHTDASSAKAVKNSDHITRIYAC 566
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 175,886
Number of Sequences: 336
Number of extensions: 3658
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21376414
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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