Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20240
         (788 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92849-14|CAE17857.1|  359|Caenorhabditis elegans Hypothetical p...    30   2.2  
Z78414-4|CAE17982.1|  359|Caenorhabditis elegans Hypothetical pr...    30   2.2  
Z81581-14|CAH10785.1|  628|Caenorhabditis elegans Hypothetical p...    29   3.8  
Z81581-12|CAB70244.3|  635|Caenorhabditis elegans Hypothetical p...    29   3.8  
Z81581-2|CAD56595.1|  672|Caenorhabditis elegans Hypothetical pr...    29   3.8  
Z81581-1|CAD56594.1|  655|Caenorhabditis elegans Hypothetical pr...    29   3.8  
Z75534-3|CAH04714.1|  628|Caenorhabditis elegans Hypothetical pr...    29   3.8  
Z75534-2|CAA99825.4|  635|Caenorhabditis elegans Hypothetical pr...    29   3.8  
Z67995-6|CAA91946.1| 2692|Caenorhabditis elegans Hypothetical pr...    29   3.8  
Z67737-7|CAA91543.1| 2692|Caenorhabditis elegans Hypothetical pr...    29   3.8  
AC006631-5|AAF39790.3|  469|Caenorhabditis elegans Acetylcholine...    28   8.8  

>Z92849-14|CAE17857.1|  359|Caenorhabditis elegans Hypothetical
           protein H12D21.11 protein.
          Length = 359

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 13/50 (26%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
 Frame = -2

Query: 649 CYFQLVSNKHLFLFFIFVDYIKSKTKCSIFENVTGTLVTCSI-FSYLIDY 503
           CY   +   H     +++D   +  KC I+ +V  T +  SI F  ++D+
Sbjct: 139 CYLTTIMTLHAISMILYLDKSLALIKCGIYNSVGKTFIYISIVFKIMLDH 188


>Z78414-4|CAE17982.1|  359|Caenorhabditis elegans Hypothetical
           protein H12D21.11 protein.
          Length = 359

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 13/50 (26%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
 Frame = -2

Query: 649 CYFQLVSNKHLFLFFIFVDYIKSKTKCSIFENVTGTLVTCSI-FSYLIDY 503
           CY   +   H     +++D   +  KC I+ +V  T +  SI F  ++D+
Sbjct: 139 CYLTTIMTLHAISMILYLDKSLALIKCGIYNSVGKTFIYISIVFKIMLDH 188


>Z81581-14|CAH10785.1|  628|Caenorhabditis elegans Hypothetical
           protein F08A10.1d protein.
          Length = 628

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 18/68 (26%), Positives = 36/68 (52%)
 Frame = +2

Query: 104 WIVSIWSTTPHKQPPLDLTELNIEKLPIQFVAPYHSDEYHEVLRHESDLPHQYPVSLSLH 283
           W+V++ S     Q  L+L    +  LPI+F+AP+ +D +H+   +  ++     +S+ + 
Sbjct: 289 WMVAL-SFRRTCQIGLELLICMLCPLPIEFIAPFMNDRFHDKTLYAVNV----FLSIMMF 343

Query: 284 HKSTWSCR 307
            +  W CR
Sbjct: 344 FRLYWLCR 351


>Z81581-12|CAB70244.3|  635|Caenorhabditis elegans Hypothetical
           protein F08A10.1a protein.
          Length = 635

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 18/68 (26%), Positives = 36/68 (52%)
 Frame = +2

Query: 104 WIVSIWSTTPHKQPPLDLTELNIEKLPIQFVAPYHSDEYHEVLRHESDLPHQYPVSLSLH 283
           W+V++ S     Q  L+L    +  LPI+F+AP+ +D +H+   +  ++     +S+ + 
Sbjct: 296 WMVAL-SFRRTCQIGLELLICMLCPLPIEFIAPFMNDRFHDKTLYAVNV----FLSIMMF 350

Query: 284 HKSTWSCR 307
            +  W CR
Sbjct: 351 FRLYWLCR 358


>Z81581-2|CAD56595.1|  672|Caenorhabditis elegans Hypothetical
           protein F08A10.1c protein.
          Length = 672

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 18/68 (26%), Positives = 36/68 (52%)
 Frame = +2

Query: 104 WIVSIWSTTPHKQPPLDLTELNIEKLPIQFVAPYHSDEYHEVLRHESDLPHQYPVSLSLH 283
           W+V++ S     Q  L+L    +  LPI+F+AP+ +D +H+   +  ++     +S+ + 
Sbjct: 316 WMVAL-SFRRTCQIGLELLICMLCPLPIEFIAPFMNDRFHDKTLYAVNV----FLSIMMF 370

Query: 284 HKSTWSCR 307
            +  W CR
Sbjct: 371 FRLYWLCR 378


>Z81581-1|CAD56594.1|  655|Caenorhabditis elegans Hypothetical
           protein F08A10.1b protein.
          Length = 655

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 18/68 (26%), Positives = 36/68 (52%)
 Frame = +2

Query: 104 WIVSIWSTTPHKQPPLDLTELNIEKLPIQFVAPYHSDEYHEVLRHESDLPHQYPVSLSLH 283
           W+V++ S     Q  L+L    +  LPI+F+AP+ +D +H+   +  ++     +S+ + 
Sbjct: 316 WMVAL-SFRRTCQIGLELLICMLCPLPIEFIAPFMNDRFHDKTLYAVNV----FLSIMMF 370

Query: 284 HKSTWSCR 307
            +  W CR
Sbjct: 371 FRLYWLCR 378


>Z75534-3|CAH04714.1|  628|Caenorhabditis elegans Hypothetical
           protein F08A10.1d protein.
          Length = 628

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 18/68 (26%), Positives = 36/68 (52%)
 Frame = +2

Query: 104 WIVSIWSTTPHKQPPLDLTELNIEKLPIQFVAPYHSDEYHEVLRHESDLPHQYPVSLSLH 283
           W+V++ S     Q  L+L    +  LPI+F+AP+ +D +H+   +  ++     +S+ + 
Sbjct: 289 WMVAL-SFRRTCQIGLELLICMLCPLPIEFIAPFMNDRFHDKTLYAVNV----FLSIMMF 343

Query: 284 HKSTWSCR 307
            +  W CR
Sbjct: 344 FRLYWLCR 351


>Z75534-2|CAA99825.4|  635|Caenorhabditis elegans Hypothetical
           protein F08A10.1a protein.
          Length = 635

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 18/68 (26%), Positives = 36/68 (52%)
 Frame = +2

Query: 104 WIVSIWSTTPHKQPPLDLTELNIEKLPIQFVAPYHSDEYHEVLRHESDLPHQYPVSLSLH 283
           W+V++ S     Q  L+L    +  LPI+F+AP+ +D +H+   +  ++     +S+ + 
Sbjct: 296 WMVAL-SFRRTCQIGLELLICMLCPLPIEFIAPFMNDRFHDKTLYAVNV----FLSIMMF 350

Query: 284 HKSTWSCR 307
            +  W CR
Sbjct: 351 FRLYWLCR 358


>Z67995-6|CAA91946.1| 2692|Caenorhabditis elegans Hypothetical protein
            T01H10.8 protein.
          Length = 2692

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
 Frame = +2

Query: 56   VTSETSLRYYKKIRNRWIVSIWSTTPHKQPPLDLTELN--IEKLPIQFVAPYHSDEYHEV 229
            V SE + RY+   RN  I  I       QP  D++E+N  +EKL     AP +    +E+
Sbjct: 1770 VESEIASRYWLDQRNEVISKINLKGRTPQPYCDVSEINFSLEKLQKSLAAPRNMKRINEI 1829


>Z67737-7|CAA91543.1| 2692|Caenorhabditis elegans Hypothetical protein
            T01H10.8 protein.
          Length = 2692

 Score = 29.1 bits (62), Expect = 3.8
 Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
 Frame = +2

Query: 56   VTSETSLRYYKKIRNRWIVSIWSTTPHKQPPLDLTELN--IEKLPIQFVAPYHSDEYHEV 229
            V SE + RY+   RN  I  I       QP  D++E+N  +EKL     AP +    +E+
Sbjct: 1770 VESEIASRYWLDQRNEVISKINLKGRTPQPYCDVSEINFSLEKLQKSLAAPRNMKRINEI 1829


>AC006631-5|AAF39790.3|  469|Caenorhabditis elegans Acetylcholine
           receptor protein 21 protein.
          Length = 469

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 11/40 (27%), Positives = 22/40 (55%)
 Frame = +2

Query: 170 IEKLPIQFVAPYHSDEYHEVLRHESDLPHQYPVSLSLHHK 289
           + K+    + PYHS  +H    ++ + P +  +S S+H+K
Sbjct: 316 LSKILFVRIEPYHSIAHHVRYMYQKEHPTECTLSASVHYK 355


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,538,437
Number of Sequences: 27780
Number of extensions: 324956
Number of successful extensions: 850
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 833
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 850
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1914239236
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)