Bombyx BLAST Result against arabidopsis

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20240
         (788 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g45440.1 68416.m04905 lectin protein kinase family protein co...    29   3.5  
At1g61500.1 68414.m06929 S-locus protein kinase, putative simila...    28   6.1  

>At3g45440.1 68416.m04905 lectin protein kinase family protein
           contains Legume lectins beta-chain signature,
           PROSITE:PS00307 and PS00108: Serine/Threonine protein
           kinases active-site signature, PROSITE:PS00108
          Length = 669

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
 Frame = +3

Query: 351 PAVAVLSMFVLMVIILILRFGAQWCKLRHTTYAD-QDEWNEDEAYEQKVSY 500
           P+V ++ + +L+ II+ L  GA +   R   YA+ ++EW E E    + SY
Sbjct: 284 PSVVLIVLLILLAIIVFLALGAAYV-YRRRKYAEIREEW-EKEYGPHRFSY 332


>At1g61500.1 68414.m06929 S-locus protein kinase, putative similar
           to KI domain interacting kinase 1 [Zea mays]
           gi|2735017|gb|AAB93834; contains S-locus glycoprotein
           family domain, Pfam:PF00954
          Length = 804

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 11/39 (28%), Positives = 18/39 (46%)
 Frame = +3

Query: 357 VAVLSMFVLMVIILILRFGAQWCKLRHTTYADQDEWNED 473
           VA +    L +I+    FG   C++ H  +  +D W  D
Sbjct: 429 VASIVSLTLFMILGFTAFGVWRCRVEHIAHISKDAWKND 467


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,187,408
Number of Sequences: 28952
Number of extensions: 286823
Number of successful extensions: 654
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 643
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 654
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1775300800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)