Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20239
         (793 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY659929-1|AAT51797.1|  140|Anopheles gambiae lysozyme c-2 protein.    28   0.29 
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    24   4.7  
CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal ...    24   6.2  

>AY659929-1|AAT51797.1|  140|Anopheles gambiae lysozyme c-2 protein.
          Length = 140

 Score = 28.3 bits (60), Expect = 0.29
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = +1

Query: 538 NSWNTKLQSLNSDARSYVGFDWNIHNVYWFDSNLHQQFPNVP 663
           +S++T     N+D  +  G  + I+N YW DS+      N+P
Sbjct: 53  SSYSTTATHKNTDGSTDYGI-FQINNAYWCDSHYGSNLCNIP 93


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score = 24.2 bits (50), Expect = 4.7
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 496  NWCIKNTEHWGTFINSWNT 552
            +W +K+ +HW   I S NT
Sbjct: 1192 DWLVKDPKHWPKNIESGNT 1210


>CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal RNA
           adenine dimethylaseprotein.
          Length = 375

 Score = 23.8 bits (49), Expect = 6.2
 Identities = 11/44 (25%), Positives = 22/44 (50%)
 Frame = +2

Query: 596 LIGTSIMYIGLTLTYISSFQMFRGSIIVFVAVLSMTFSNKQSSK 727
           L+ + +++  +  T  + ++++RG  IVF       F  K  SK
Sbjct: 136 LVMSPLLFSHIASTKDAGYKLYRGGTIVFQLYFEHEFLGKVPSK 179


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 861,320
Number of Sequences: 2352
Number of extensions: 17837
Number of successful extensions: 37
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 83160600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)