Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20239
(793 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR457243-1|CAG33524.1| 371|Homo sapiens C2orf18 protein. 86 2e-16
BC028081-1|AAH28081.1| 371|Homo sapiens C2orf18 protein protein. 86 2e-16
AY358820-1|AAQ89179.1| 371|Homo sapiens AWTK3047 protein. 86 2e-16
AK222929-1|BAD96649.1| 371|Homo sapiens chromosome 2 open readi... 86 2e-16
AK075164-1|BAC11445.1| 371|Homo sapiens protein ( Homo sapiens ... 86 2e-16
AK000562-1|BAA91255.1| 371|Homo sapiens protein ( Homo sapiens ... 86 2e-16
AC011740-1|AAX93265.1| 371|Homo sapiens unknown protein. 86 2e-16
>CR457243-1|CAG33524.1| 371|Homo sapiens C2orf18 protein.
Length = 371
Score = 85.8 bits (203), Expect = 2e-16
Identities = 41/68 (60%), Positives = 48/68 (70%), Gaps = 1/68 (1%)
Frame = +3
Query: 303 MAWTNYQKFLALMMLVTGSINSLSTKWADILKSKGSDG-EERYFNHPFLQTLSMFLGEML 479
MAWT YQ FLA +MLVTGSIN+LS KWAD ++G G +E F HPFLQ + MFLGE
Sbjct: 1 MAWTKYQLFLAGLMLVTGSINTLSAKWADNFMAEGCGGSKEHSFQHPFLQAVGMFLGEFS 60
Query: 480 CLLVFKLV 503
CL F L+
Sbjct: 61 CLAAFYLL 68
Score = 66.5 bits (155), Expect = 1e-10
Identities = 31/81 (38%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Frame = +2
Query: 482 FTCVQ-IGVLKTRNTGGHSLTAGTQN-FNPLILMPAAMLDLIGTSIMYIGLTLTYISSFQ 655
F+C+ +L+ R G + Q FNPL+ +P A+ D+ GTS+MY+ L +T SSFQ
Sbjct: 59 FSCLAAFYLLRCRAAGQSDSSVDPQQPFNPLLFLPPALCDMTGTSLMYVALNMTSASSFQ 118
Query: 656 MFRGSIIVFVAVLSMTFSNKQ 718
M RG++I+F + S+ F ++
Sbjct: 119 MLRGAVIIFTGLFSVAFLGRR 139
>BC028081-1|AAH28081.1| 371|Homo sapiens C2orf18 protein protein.
Length = 371
Score = 85.8 bits (203), Expect = 2e-16
Identities = 41/68 (60%), Positives = 48/68 (70%), Gaps = 1/68 (1%)
Frame = +3
Query: 303 MAWTNYQKFLALMMLVTGSINSLSTKWADILKSKGSDG-EERYFNHPFLQTLSMFLGEML 479
MAWT YQ FLA +MLVTGSIN+LS KWAD ++G G +E F HPFLQ + MFLGE
Sbjct: 1 MAWTKYQLFLAGLMLVTGSINTLSAKWADNFMAEGCGGSKEHSFQHPFLQAVGMFLGEFS 60
Query: 480 CLLVFKLV 503
CL F L+
Sbjct: 61 CLAAFYLL 68
Score = 66.5 bits (155), Expect = 1e-10
Identities = 31/81 (38%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Frame = +2
Query: 482 FTCVQ-IGVLKTRNTGGHSLTAGTQN-FNPLILMPAAMLDLIGTSIMYIGLTLTYISSFQ 655
F+C+ +L+ R G + Q FNPL+ +P A+ D+ GTS+MY+ L +T SSFQ
Sbjct: 59 FSCLAAFYLLRCRAAGQSDSSVDPQQPFNPLLFLPPALCDMTGTSLMYVALNMTSASSFQ 118
Query: 656 MFRGSIIVFVAVLSMTFSNKQ 718
M RG++I+F + S+ F ++
Sbjct: 119 MLRGAVIIFTGLFSVAFLGRR 139
>AY358820-1|AAQ89179.1| 371|Homo sapiens AWTK3047 protein.
Length = 371
Score = 85.8 bits (203), Expect = 2e-16
Identities = 41/68 (60%), Positives = 48/68 (70%), Gaps = 1/68 (1%)
Frame = +3
Query: 303 MAWTNYQKFLALMMLVTGSINSLSTKWADILKSKGSDG-EERYFNHPFLQTLSMFLGEML 479
MAWT YQ FLA +MLVTGSIN+LS KWAD ++G G +E F HPFLQ + MFLGE
Sbjct: 1 MAWTKYQLFLAGLMLVTGSINTLSAKWADNFMAEGCGGSKEHSFQHPFLQAVGMFLGEFS 60
Query: 480 CLLVFKLV 503
CL F L+
Sbjct: 61 CLAAFYLL 68
Score = 66.5 bits (155), Expect = 1e-10
Identities = 31/81 (38%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Frame = +2
Query: 482 FTCVQ-IGVLKTRNTGGHSLTAGTQN-FNPLILMPAAMLDLIGTSIMYIGLTLTYISSFQ 655
F+C+ +L+ R G + Q FNPL+ +P A+ D+ GTS+MY+ L +T SSFQ
Sbjct: 59 FSCLAAFYLLRCRAAGQSDSSVDPQQPFNPLLFLPPALCDMTGTSLMYVALNMTSASSFQ 118
Query: 656 MFRGSIIVFVAVLSMTFSNKQ 718
M RG++I+F + S+ F ++
Sbjct: 119 MLRGAVIIFTGLFSVAFLGRR 139
>AK222929-1|BAD96649.1| 371|Homo sapiens chromosome 2 open reading
frame 18 variant protein.
Length = 371
Score = 85.8 bits (203), Expect = 2e-16
Identities = 41/68 (60%), Positives = 48/68 (70%), Gaps = 1/68 (1%)
Frame = +3
Query: 303 MAWTNYQKFLALMMLVTGSINSLSTKWADILKSKGSDG-EERYFNHPFLQTLSMFLGEML 479
MAWT YQ FLA +MLVTGSIN+LS KWAD ++G G +E F HPFLQ + MFLGE
Sbjct: 1 MAWTKYQLFLAGLMLVTGSINTLSAKWADNFMAEGCGGSKEHSFQHPFLQAVGMFLGEFS 60
Query: 480 CLLVFKLV 503
CL F L+
Sbjct: 61 CLAAFYLL 68
Score = 64.9 bits (151), Expect = 3e-10
Identities = 31/81 (38%), Positives = 49/81 (60%), Gaps = 2/81 (2%)
Frame = +2
Query: 482 FTCVQ-IGVLKTRNTGGHSLTAGTQN-FNPLILMPAAMLDLIGTSIMYIGLTLTYISSFQ 655
F+C+ +L+ R G + Q FNPL+ +P A+ D+ GTS+MY L +T SSFQ
Sbjct: 59 FSCLAAFYLLRCRAAGQSDSSVDPQQPFNPLLFLPPALCDMTGTSLMYAALNMTSASSFQ 118
Query: 656 MFRGSIIVFVAVLSMTFSNKQ 718
M RG++I+F + S+ F ++
Sbjct: 119 MLRGAVIIFTGLFSVAFLGRR 139
>AK075164-1|BAC11445.1| 371|Homo sapiens protein ( Homo sapiens
cDNA FLJ90683 fis, clone PLACE1005927. ).
Length = 371
Score = 85.8 bits (203), Expect = 2e-16
Identities = 41/68 (60%), Positives = 48/68 (70%), Gaps = 1/68 (1%)
Frame = +3
Query: 303 MAWTNYQKFLALMMLVTGSINSLSTKWADILKSKGSDG-EERYFNHPFLQTLSMFLGEML 479
MAWT YQ FLA +MLVTGSIN+LS KWAD ++G G +E F HPFLQ + MFLGE
Sbjct: 1 MAWTKYQLFLAGLMLVTGSINTLSAKWADNFMAEGCGGSKEHSFQHPFLQAVGMFLGEFS 60
Query: 480 CLLVFKLV 503
CL F L+
Sbjct: 61 CLAAFYLL 68
Score = 66.5 bits (155), Expect = 1e-10
Identities = 31/81 (38%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Frame = +2
Query: 482 FTCVQ-IGVLKTRNTGGHSLTAGTQN-FNPLILMPAAMLDLIGTSIMYIGLTLTYISSFQ 655
F+C+ +L+ R G + Q FNPL+ +P A+ D+ GTS+MY+ L +T SSFQ
Sbjct: 59 FSCLAAFYLLRCRAAGQSDSSVDPQQPFNPLLFLPPALCDMTGTSLMYVALNMTSASSFQ 118
Query: 656 MFRGSIIVFVAVLSMTFSNKQ 718
M RG++I+F + S+ F ++
Sbjct: 119 MLRGAVIIFTGLFSVAFLGRR 139
>AK000562-1|BAA91255.1| 371|Homo sapiens protein ( Homo sapiens
cDNA FLJ20555 fis, clone KAT11822. ).
Length = 371
Score = 85.8 bits (203), Expect = 2e-16
Identities = 41/68 (60%), Positives = 48/68 (70%), Gaps = 1/68 (1%)
Frame = +3
Query: 303 MAWTNYQKFLALMMLVTGSINSLSTKWADILKSKGSDG-EERYFNHPFLQTLSMFLGEML 479
MAWT YQ FLA +MLVTGSIN+LS KWAD ++G G +E F HPFLQ + MFLGE
Sbjct: 1 MAWTKYQLFLAGLMLVTGSINTLSAKWADNFMAEGCGGSKEHSFQHPFLQAVGMFLGEFS 60
Query: 480 CLLVFKLV 503
CL F L+
Sbjct: 61 CLAAFYLL 68
Score = 66.5 bits (155), Expect = 1e-10
Identities = 31/81 (38%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Frame = +2
Query: 482 FTCVQ-IGVLKTRNTGGHSLTAGTQN-FNPLILMPAAMLDLIGTSIMYIGLTLTYISSFQ 655
F+C+ +L+ R G + Q FNPL+ +P A+ D+ GTS+MY+ L +T SSFQ
Sbjct: 59 FSCLAAFYLLRCRAAGQSDSSVDPQQPFNPLLFLPPALCDMTGTSLMYVALNMTSASSFQ 118
Query: 656 MFRGSIIVFVAVLSMTFSNKQ 718
M RG++I+F + S+ F ++
Sbjct: 119 MLRGAVIIFTGLFSVAFLGRR 139
>AC011740-1|AAX93265.1| 371|Homo sapiens unknown protein.
Length = 371
Score = 85.8 bits (203), Expect = 2e-16
Identities = 41/68 (60%), Positives = 48/68 (70%), Gaps = 1/68 (1%)
Frame = +3
Query: 303 MAWTNYQKFLALMMLVTGSINSLSTKWADILKSKGSDG-EERYFNHPFLQTLSMFLGEML 479
MAWT YQ FLA +MLVTGSIN+LS KWAD ++G G +E F HPFLQ + MFLGE
Sbjct: 1 MAWTKYQLFLAGLMLVTGSINTLSAKWADNFMAEGCGGSKEHSFQHPFLQAVGMFLGEFS 60
Query: 480 CLLVFKLV 503
CL F L+
Sbjct: 61 CLAAFYLL 68
Score = 66.5 bits (155), Expect = 1e-10
Identities = 31/81 (38%), Positives = 50/81 (61%), Gaps = 2/81 (2%)
Frame = +2
Query: 482 FTCVQ-IGVLKTRNTGGHSLTAGTQN-FNPLILMPAAMLDLIGTSIMYIGLTLTYISSFQ 655
F+C+ +L+ R G + Q FNPL+ +P A+ D+ GTS+MY+ L +T SSFQ
Sbjct: 59 FSCLAAFYLLRCRAAGQSDSSVDPQQPFNPLLFLPPALCDMTGTSLMYVALNMTSASSFQ 118
Query: 656 MFRGSIIVFVAVLSMTFSNKQ 718
M RG++I+F + S+ F ++
Sbjct: 119 MLRGAVIIFTGLFSVAFLGRR 139
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,074,618
Number of Sequences: 237096
Number of extensions: 2561128
Number of successful extensions: 12165
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11921
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12158
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9701808132
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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