Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20239
(793 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY058745-1|AAL13974.1| 381|Drosophila melanogaster LP09696p pro... 62 6e-10
AE014297-1417|AAF54727.1| 381|Drosophila melanogaster CG10007-P... 62 6e-10
BT003480-1|AAO39483.1| 853|Drosophila melanogaster RE58242p pro... 30 4.2
AE014298-1852|AAF48232.2| 853|Drosophila melanogaster CG32645-P... 30 4.2
AY071412-1|AAL49034.1| 419|Drosophila melanogaster RE49527p pro... 29 5.5
AE014297-4837|AAN14299.1| 492|Drosophila melanogaster CG2003-PB... 29 5.5
AE014297-4836|AAF57210.1| 492|Drosophila melanogaster CG2003-PA... 29 5.5
AY069077-1|AAL39222.1| 639|Drosophila melanogaster GH09339p pro... 29 9.6
AE014297-1954|AAF55141.2| 639|Drosophila melanogaster CG6654-PA... 29 9.6
>AY058745-1|AAL13974.1| 381|Drosophila melanogaster LP09696p
protein.
Length = 381
Score = 62.5 bits (145), Expect = 6e-10
Identities = 28/63 (44%), Positives = 43/63 (68%)
Frame = +3
Query: 315 NYQKFLALMMLVTGSINSLSTKWADILKSKGSDGEERYFNHPFLQTLSMFLGEMLCLLVF 494
+++ FL+L+ +++G+ N L KWA+ + GSDG+ F HP + TL MFLGE LC VF
Sbjct: 2 DHRVFLSLIFVLSGTFNVLVVKWANQQQVIGSDGKLHGFQHPVVFTLLMFLGEFLCFAVF 61
Query: 495 KLV 503
K++
Sbjct: 62 KVI 64
Score = 50.8 bits (116), Expect = 2e-06
Identities = 21/59 (35%), Positives = 36/59 (61%)
Frame = +2
Query: 536 LTAGTQNFNPLILMPAAMLDLIGTSIMYIGLTLTYISSFQMFRGSIIVFVAVLSMTFSN 712
L+ + F P+ ++ +LD + +++ GL LTY +SFQM RG+ ++FV + S F N
Sbjct: 81 LSQDSSEFRPVSMLLPTLLDAAASILLFTGLYLTYATSFQMIRGAALIFVGIFSTMFLN 139
>AE014297-1417|AAF54727.1| 381|Drosophila melanogaster CG10007-PA
protein.
Length = 381
Score = 62.5 bits (145), Expect = 6e-10
Identities = 28/63 (44%), Positives = 43/63 (68%)
Frame = +3
Query: 315 NYQKFLALMMLVTGSINSLSTKWADILKSKGSDGEERYFNHPFLQTLSMFLGEMLCLLVF 494
+++ FL+L+ +++G+ N L KWA+ + GSDG+ F HP + TL MFLGE LC VF
Sbjct: 2 DHRVFLSLIFVLSGTFNVLVVKWANQQQVIGSDGKLHGFQHPVVFTLLMFLGEFLCFAVF 61
Query: 495 KLV 503
K++
Sbjct: 62 KVI 64
Score = 50.8 bits (116), Expect = 2e-06
Identities = 21/59 (35%), Positives = 36/59 (61%)
Frame = +2
Query: 536 LTAGTQNFNPLILMPAAMLDLIGTSIMYIGLTLTYISSFQMFRGSIIVFVAVLSMTFSN 712
L+ + F P+ ++ +LD + +++ GL LTY +SFQM RG+ ++FV + S F N
Sbjct: 81 LSQDSSEFRPVSMLLPTLLDAAASILLFTGLYLTYATSFQMIRGAALIFVGIFSTMFLN 139
>BT003480-1|AAO39483.1| 853|Drosophila melanogaster RE58242p
protein.
Length = 853
Score = 29.9 bits (64), Expect = 4.2
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Frame = +2
Query: 524 GGHSLTAGTQNFNPLILMPAAMLDLIGTSIMYIGLTLTY-ISSFQMFRGSIIVF-VAVLS 697
G H+L++ N + L L T + ++ L+Y +S + R ++ VF +AVL+
Sbjct: 32 GRHNLSSAPDQHNVINLSLHGDLTA-ATLLPHVDPKLSYDLSQTRRLRDALNVFDLAVLA 90
Query: 698 MTFSNKQSSKENGSDCVRHHRTLIVGVTDA 787
+ +SS ++C R R+ + G++DA
Sbjct: 91 AQWGQVESSGGVSANCSRDMRSYLGGLSDA 120
>AE014298-1852|AAF48232.2| 853|Drosophila melanogaster CG32645-PB
protein.
Length = 853
Score = 29.9 bits (64), Expect = 4.2
Identities = 24/90 (26%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Frame = +2
Query: 524 GGHSLTAGTQNFNPLILMPAAMLDLIGTSIMYIGLTLTY-ISSFQMFRGSIIVF-VAVLS 697
G H+L++ N + L L T + ++ L+Y +S + R ++ VF +AVL+
Sbjct: 32 GRHNLSSAPDQHNVINLSLHGDLTA-ATLLPHVDPKLSYDLSQTRRLRDALNVFDLAVLA 90
Query: 698 MTFSNKQSSKENGSDCVRHHRTLIVGVTDA 787
+ +SS ++C R R+ + G++DA
Sbjct: 91 AQWGQVESSGGVSANCSRDMRSYLGGLSDA 120
>AY071412-1|AAL49034.1| 419|Drosophila melanogaster RE49527p
protein.
Length = 419
Score = 29.5 bits (63), Expect = 5.5
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +1
Query: 430 STIHSCRPYLCFWVKCYVYL 489
+ + S P+L WV CYVYL
Sbjct: 289 NAVFSALPFLLMWVMCYVYL 308
>AE014297-4837|AAN14299.1| 492|Drosophila melanogaster CG2003-PB,
isoform B protein.
Length = 492
Score = 29.5 bits (63), Expect = 5.5
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +1
Query: 430 STIHSCRPYLCFWVKCYVYL 489
+ + S P+L WV CYVYL
Sbjct: 289 NAVFSALPFLLMWVMCYVYL 308
>AE014297-4836|AAF57210.1| 492|Drosophila melanogaster CG2003-PA,
isoform A protein.
Length = 492
Score = 29.5 bits (63), Expect = 5.5
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +1
Query: 430 STIHSCRPYLCFWVKCYVYL 489
+ + S P+L WV CYVYL
Sbjct: 289 NAVFSALPFLLMWVMCYVYL 308
>AY069077-1|AAL39222.1| 639|Drosophila melanogaster GH09339p
protein.
Length = 639
Score = 28.7 bits (61), Expect = 9.6
Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 5/33 (15%)
Frame = -3
Query: 392 YISPFC----TQRVD*ASHQH-HQGEELLVVCP 309
Y+ PFC TQR D HQ HQGE + +CP
Sbjct: 552 YVCPFCSKTFTQRGDCQMHQRTHQGER-IYICP 583
>AE014297-1954|AAF55141.2| 639|Drosophila melanogaster CG6654-PA
protein.
Length = 639
Score = 28.7 bits (61), Expect = 9.6
Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 5/33 (15%)
Frame = -3
Query: 392 YISPFC----TQRVD*ASHQH-HQGEELLVVCP 309
Y+ PFC TQR D HQ HQGE + +CP
Sbjct: 552 YVCPFCSKTFTQRGDCQMHQRTHQGER-IYICP 583
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,871,876
Number of Sequences: 53049
Number of extensions: 766790
Number of successful extensions: 1936
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1883
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1936
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3675273108
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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