Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20237
(737 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 140 1e-34
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 78 1e-15
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 61 1e-10
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 57 3e-09
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 57 3e-09
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 56 4e-09
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 56 5e-09
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 55 9e-09
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 53 5e-08
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 52 6e-08
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 51 2e-07
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 50 3e-07
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 49 8e-07
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 45 1e-05
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 43 5e-05
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 40 4e-04
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 36 0.008
SPAC23A1.15c |sec20||SNARE Sec20|Schizosaccharomyces pombe|chr 1... 29 0.52
SPAC19A8.02 |||transcriptional coactivator |Schizosaccharomyces ... 27 2.8
SPAC3A11.05c |kms1||meiotic spindle pole body protein Kms1|Schiz... 26 4.9
SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1||... 26 4.9
SPAC9G1.05 |||actin cortical patch component Aip1 |Schizosacchar... 26 4.9
SPAC57A10.02 |cdr2||GIN4 family protein kinase Cdr2|Schizosaccha... 26 6.4
SPAC57A7.06 |||U3 snoRNP protein Utp14 |Schizosaccharomyces pomb... 25 8.5
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 140 bits (340), Expect = 1e-34
Identities = 68/104 (65%), Positives = 83/104 (79%)
Frame = +3
Query: 195 YISQDDRVQIGGCGCGRRW*SALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDIL 374
Y+ + V +G G G+ SALTIQLIQ+HFVDEYDPTIEDSYRK+ IDGE LLD+L
Sbjct: 5 YLREYKLVVVGDGGVGK---SALTIQLIQSHFVDEYDPTIEDSYRKKCEIDGEGALLDVL 61
Query: 375 DTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDIGSYREQI 506
DTAGQEEYSAMR+QYMRTGEGFLLV+ + S SF++I ++ +QI
Sbjct: 62 DTAGQEEYSAMREQYMRTGEGFLLVYNITSRSSFDEISTFYQQI 105
Score = 69.3 bits (162), Expect = 5e-13
Identities = 34/77 (44%), Positives = 52/77 (67%), Gaps = 1/77 (1%)
Frame = +2
Query: 509 RVKDAEEVPMVLVGNKCDLQSW-AVDMARAREVAQSYNVPFVETSAKTRMGVDDAFYTLV 685
RVKD + P+VLV NKCDL++ V A ++A+S + +VETSAK R+ V++AFY+LV
Sbjct: 107 RVKDKDTFPVVLVANKCDLEAERVVSRAEGEQLAKSMHCLYVETSAKLRLNVEEAFYSLV 166
Query: 686 REIRKDKVSRDRNSKGR 736
R IR+ S ++ + +
Sbjct: 167 RTIRRYNKSEEKGFQNK 183
Score = 28.7 bits (61), Expect = 0.91
Identities = 13/18 (72%), Positives = 14/18 (77%)
Frame = +1
Query: 199 SRKMTEYKLVVVGAGGVG 252
S + EYKLVVVG GGVG
Sbjct: 3 STYLREYKLVVVGDGGVG 20
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 78.2 bits (184), Expect = 1e-15
Identities = 33/84 (39%), Positives = 57/84 (67%)
Frame = +3
Query: 255 SALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGE 434
S+LT+Q ++NHFV+ Y PTIE+++ K + G+ +I+DTAGQ+EYS + ++
Sbjct: 20 SSLTVQYVENHFVESYYPTIENTFSKNIKYKGQEFATEIIDTAGQDEYSILNSKHSIGIH 79
Query: 435 GFLLVFAVNSAKSFEDIGSYREQI 506
G++LV+++ S SFE + R++I
Sbjct: 80 GYVLVYSITSKSSFEMVKIVRDKI 103
Score = 37.5 bits (83), Expect = 0.002
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 1/60 (1%)
Frame = +2
Query: 524 EEVPMVLVGNKCDL-QSWAVDMARAREVAQSYNVPFVETSAKTRMGVDDAFYTLVREIRK 700
E VP+V+VGNK DL AV + +A + + E SA+ V AF ++ EI K
Sbjct: 110 EWVPIVVVGNKSDLHMQRAVTAEEGKALANEWKCAWTEASARHNENVARAFELIISEIEK 169
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 61.3 bits (142), Expect = 1e-10
Identities = 32/81 (39%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Frame = +2
Query: 479 RHWLVSRADQRVKDAEEVPMVLVGNKCDLQSWA-VDMARAREVAQSYNVPFVETSAKTRM 655
R W S +Q +E V +L+GNKCD + V + + +A V F+E SAKT +
Sbjct: 101 RTWF-SNVEQHA--SENVYKILIGNKCDCEDQRQVSFEQGQALADELGVKFLEASAKTNV 157
Query: 656 GVDDAFYTLVREIRKDKVSRD 718
VD+AF+TL REI+K K+ +
Sbjct: 158 NVDEAFFTLAREIKKQKIDAE 178
Score = 51.6 bits (118), Expect = 1e-07
Identities = 28/98 (28%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Frame = +3
Query: 222 IGGCGCGRRW*SALTIQLIQNHFVDEYDPTIEDSYR-KQVVIDGETCLLDILDTAGQEEY 398
IG G G+ S L ++ ++ F + TI ++ + + +DG+ L I DTAGQE +
Sbjct: 15 IGDSGVGK---SCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERF 71
Query: 399 SAMRDQYMRTGEGFLLVFAVNSAKSFEDIGSYREQINE 512
+ Y R G LL++ V KSF+++ ++ + +
Sbjct: 72 RTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQ 109
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 56.8 bits (131), Expect = 3e-09
Identities = 29/77 (37%), Positives = 42/77 (54%)
Frame = +3
Query: 255 SALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGE 434
+ L I N F +Y PT+ D+Y V+I E L + DTAGQE+Y +R +
Sbjct: 17 TCLLISYTTNKFPSDYVPTVFDNYAVTVMIGDEPYTLGLFDTAGQEDYDRLRPLSYPQTD 76
Query: 435 GFLLVFAVNSAKSFEDI 485
FL+ F+V S SFE++
Sbjct: 77 VFLVCFSVTSPASFENV 93
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 56.8 bits (131), Expect = 3e-09
Identities = 30/95 (31%), Positives = 55/95 (57%), Gaps = 1/95 (1%)
Frame = +3
Query: 222 IGGCGCGRRW*SALTIQLIQNHFVDEYDPTI-EDSYRKQVVIDGETCLLDILDTAGQEEY 398
+G G G+ +++ Q + F +Y TI D K+V++D + L + DTAGQE +
Sbjct: 14 LGESGVGK---TSIMNQYVNRKFSKDYKATIGADFLTKEVLVDDKVVTLQLWDTAGQERF 70
Query: 399 SAMRDQYMRTGEGFLLVFAVNSAKSFEDIGSYREQ 503
++ + R + +LV+ VN++KSFE + S+R++
Sbjct: 71 QSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDE 105
Score = 37.9 bits (84), Expect = 0.001
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Frame = +2
Query: 524 EEVPMVLVGNKCDL--QSWAVDMARAREVAQSYN-VPFVETSAKTRMGVDDAFYTLVR 688
E P +L+GNK D+ Q V ++A Q+ +P+ ETSAK + V +AF T+ +
Sbjct: 116 ETFPFILLGNKVDVEEQKRMVSKSKALAFCQARGEIPYFETSAKEAINVQEAFETVAK 173
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 56.4 bits (130), Expect = 4e-09
Identities = 31/97 (31%), Positives = 54/97 (55%), Gaps = 1/97 (1%)
Frame = +3
Query: 216 VQIGGCGCGRRW*SALTIQLIQNHFVDEYDPTI-EDSYRKQVVIDGETCLLDILDTAGQE 392
V +G G G+ + L Q + F EY TI D K VV+D + L + DTAGQE
Sbjct: 12 VILGDSGVGK---TCLMNQFVNQKFSREYKATIGADFLTKDVVVDDKLVTLQLWDTAGQE 68
Query: 393 EYSAMRDQYMRTGEGFLLVFAVNSAKSFEDIGSYREQ 503
+ ++ + R + ++V+ VN++KSF+ + ++R++
Sbjct: 69 RFQSLGMAFYRGADCCVIVYNVNNSKSFDSVENWRQE 105
Score = 33.5 bits (73), Expect = 0.032
Identities = 26/84 (30%), Positives = 40/84 (47%), Gaps = 5/84 (5%)
Frame = +2
Query: 482 HWLVSRADQRVKDAEEVPMVLVGNKCDLQSW--AVDMARAREVAQSY---NVPFVETSAK 646
+W Q +D P ++VGN+ D + AV + RA + +S N+ E SAK
Sbjct: 101 NWRQEFLYQTSQDECAFPFIIVGNQIDKDASKRAVSLHRALDYCKSKHGSNMIHFEASAK 160
Query: 647 TRMGVDDAFYTLVREIRKDKVSRD 718
V D F T+ R +++ SRD
Sbjct: 161 ENTNVTDLFETVSRLALENESSRD 184
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 56.0 bits (129), Expect = 5e-09
Identities = 33/99 (33%), Positives = 55/99 (55%), Gaps = 1/99 (1%)
Frame = +3
Query: 216 VQIGGCGCGRRW*SALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEE 395
V +G CG+ S L++ + +F EY PT+ ++Y +DG++ L + DTAGQEE
Sbjct: 12 VVVGDGACGKT--SLLSVFTL-GYFPTEYVPTVFENYVSDCRVDGKSVQLALWDTAGQEE 68
Query: 396 YSAMRDQYMRTGEGFLLVFAVNSAKSFEDIGS-YREQIN 509
Y +R L+ FA++S S E++ + + E+IN
Sbjct: 69 YERLRPMSYAKAHIILVGFAIDSPDSLENVSTKWIEEIN 107
Score = 25.8 bits (54), Expect = 6.4
Identities = 24/67 (35%), Positives = 31/67 (46%), Gaps = 14/67 (20%)
Frame = +2
Query: 530 VPMVLVGNKCDLQS--WAVDMARARE-----------VAQSYNV-PFVETSAKTRMGVDD 667
VP +LVG K DL+S A++ R R VAQ ++E S+ T GVDD
Sbjct: 113 VPFILVGMKADLRSDPVAIEEMRRRNQNFVKSQQAELVAQRIGARKYMECSSLTGDGVDD 172
Query: 668 AFYTLVR 688
F R
Sbjct: 173 VFEAATR 179
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 55.2 bits (127), Expect = 9e-09
Identities = 32/100 (32%), Positives = 52/100 (52%), Gaps = 1/100 (1%)
Frame = +3
Query: 216 VQIGGCGCGRRW*SALTIQLIQNHFVDEYDPTIEDSYR-KQVVIDGETCLLDILDTAGQE 392
V IG G G+ S L ++ +N F E TI + + +V+D + I DTAGQE
Sbjct: 14 VLIGDSGVGK---SNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTAGQE 70
Query: 393 EYSAMRDQYMRTGEGFLLVFAVNSAKSFEDIGSYREQINE 512
Y A+ Y R G L+V+ + SF+++G + +++ E
Sbjct: 71 RYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELRE 110
Score = 41.1 bits (92), Expect = 2e-04
Identities = 23/56 (41%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Frame = +2
Query: 530 VPMVLVGNKCDLQSW-AVDMARAREVAQSYNVPFVETSAKTRMGVDDAFYTLVREI 694
+ ++LVGNK DL AV A+ A N+ F+ETSA V++AF T++ EI
Sbjct: 116 IVIMLVGNKTDLLHLRAVSTEEAQAFAAENNLSFIETSAMDASNVEEAFQTVLTEI 171
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 52.8 bits (121), Expect = 5e-08
Identities = 24/69 (34%), Positives = 39/69 (56%)
Frame = +3
Query: 279 QNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAV 458
+ +F Y+PTI ++Y + +DG + L + DTAGQEEY +R ++ FAV
Sbjct: 35 KGYFPQVYEPTIFENYIHDIFVDGNSIELSLWDTAGQEEYDQLRSLSYSDTHVIMICFAV 94
Query: 459 NSAKSFEDI 485
+S S E++
Sbjct: 95 DSRDSLENV 103
Score = 28.3 bits (60), Expect = 1.2
Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 10/63 (15%)
Frame = +2
Query: 530 VPMVLVGNKCDLQ---------SWAVDMARAREVAQSYN-VPFVETSAKTRMGVDDAFYT 679
V +VLV KCDL+ S +D A+ N V ++E SAK GV++AF
Sbjct: 118 VKLVLVALKCDLRGADEEQVDHSKIIDYEEGLAAAKKINAVRYLECSAKLNRGVNEAFTE 177
Query: 680 LVR 688
R
Sbjct: 178 AAR 180
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 52.4 bits (120), Expect = 6e-08
Identities = 27/60 (45%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Frame = +2
Query: 524 EEVPMVLVGNKCDL-QSWAVDMARAREVAQSYNVPFVETSAKTRMGVDDAFYTLVREIRK 700
E V +LVGNK D+ V+ + A+E A S N+PF+ETSAK V+ AF T+ R+I++
Sbjct: 112 EGVNRLLVGNKSDMVDKKVVEYSVAKEFADSLNIPFLETSAKDSTNVEQAFLTMSRQIKE 171
Score = 51.2 bits (117), Expect = 1e-07
Identities = 27/97 (27%), Positives = 50/97 (51%), Gaps = 1/97 (1%)
Frame = +3
Query: 222 IGGCGCGRRW*SALTIQLIQNHFVDEYDPTIEDSYR-KQVVIDGETCLLDILDTAGQEEY 398
IG G G+ S L ++ + + + Y TI ++ + ++G+T L I DTAGQE +
Sbjct: 14 IGDSGVGK---SCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWDTAGQERF 70
Query: 399 SAMRDQYMRTGEGFLLVFAVNSAKSFEDIGSYREQIN 509
+ Y R G ++V+ V SF ++ + ++I+
Sbjct: 71 RTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEID 107
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 50.8 bits (116), Expect = 2e-07
Identities = 29/90 (32%), Positives = 46/90 (51%)
Frame = +3
Query: 216 VQIGGCGCGRRW*SALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEE 395
V +G CG+ + L I + F + Y PT+ ++Y V +DG L + DTAGQE+
Sbjct: 10 VIVGDGACGK---TCLLIVFSKGTFPEVYVPTVFENYVADVEVDGRHVELALWDTAGQED 66
Query: 396 YSAMRDQYMRTGEGFLLVFAVNSAKSFEDI 485
Y +R L+ FAV+S S +++
Sbjct: 67 YDRLRPLSYPDSHVILICFAVDSPDSLDNV 96
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 50.4 bits (115), Expect = 3e-07
Identities = 33/110 (30%), Positives = 60/110 (54%), Gaps = 2/110 (1%)
Frame = +3
Query: 183 KNILYISQDDRVQIGGCGCGRRW*SALTIQLIQNHFVDEYDPTIEDSYRKQVV-IDGETC 359
KN++ I+Q V +G G+ S+L ++ +++ F D + TI ++ Q + ID T
Sbjct: 8 KNVVTINQK-LVLLGDSAVGK---SSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDENTS 63
Query: 360 L-LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDIGSYREQI 506
+ L+I DTAGQE Y ++ Y R ++V+ + A S E S+ +++
Sbjct: 64 VKLEIWDTAGQERYKSLAPMYYRNANCAIVVYDITQAASLEKAKSWIKEL 113
Score = 41.9 bits (94), Expect = 9e-05
Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Frame = +2
Query: 524 EEVPMVLVGNKCDL--QSWAVDMARAREVAQSYNVPFVETSAKTRMGVDDAFYTLVREI- 694
E + + L GNK DL + AV+ A A A N+ F ETSAKT V++ F + +++
Sbjct: 119 EGIVIALAGNKLDLAQERRAVEKADAEAYAAEANLLFFETSAKTAENVNELFTAIAKKLP 178
Query: 695 RKDKVSRDRNSKGR 736
+DK+++ R + R
Sbjct: 179 LEDKLNQARGAVNR 192
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 48.8 bits (111), Expect = 8e-07
Identities = 27/90 (30%), Positives = 47/90 (52%)
Frame = +3
Query: 216 VQIGGCGCGRRW*SALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDILDTAGQEE 395
V +G CG+ + L I + F + Y PT+ ++Y V +DG L + DTAGQE+
Sbjct: 10 VIVGDGACGK---TCLLIVFSKGTFPEVYVPTVFENYVADVEVDGRHIELALWDTAGQED 66
Query: 396 YSAMRDQYMRTGEGFLLVFAVNSAKSFEDI 485
Y +R L+ F+V++ +S +++
Sbjct: 67 YDRLRPLSYPDSHVVLICFSVDAPESLDNV 96
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 45.2 bits (102), Expect = 1e-05
Identities = 29/102 (28%), Positives = 51/102 (50%), Gaps = 5/102 (4%)
Frame = +3
Query: 216 VQIGGCGCGRRW*SALTIQLIQNHFVDEYDPTIEDSYRKQVVIDG-----ETCLLDILDT 380
V G G G+ S L + ++N + D+ T+ + +++ G + L I DT
Sbjct: 13 VLAGPSGTGK---SCLLQRFVKNQWDDQVSHTVGIDFASRIISVGMGNQQKRIKLQIWDT 69
Query: 381 AGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDIGSYREQI 506
AGQE++ ++ Y R G +LV+ V + SFE++ S+ I
Sbjct: 70 AGQEKFRSVARNYYRGAAGAVLVYDVTNKDSFEELSSWLSDI 111
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 42.7 bits (96), Expect = 5e-05
Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 2/92 (2%)
Frame = +3
Query: 216 VQIGGCGCGRRW*SALTIQLIQNHFVDEYDPTIEDSYRKQVVIDGETCLLDIL--DTAGQ 389
V +G GCG+ + L I F + Y PT+ ++Y + + ++++ DTAGQ
Sbjct: 18 VVVGDGGCGK---TCLLIVFSSGTFPERYVPTVFENYITDITYGPNSKVIELALWDTAGQ 74
Query: 390 EEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDI 485
EEY +R LL F+++ S ++
Sbjct: 75 EEYDRLRPLSYPNSNVILLCFSIDCPASLNNV 106
Score = 33.5 bits (73), Expect = 0.032
Identities = 27/78 (34%), Positives = 35/78 (44%), Gaps = 13/78 (16%)
Frame = +2
Query: 533 PMVLVGNKCDLQS-------------WAVDMARAREVAQSYNVPFVETSAKTRMGVDDAF 673
P+VLVG K DL+ V +A+ VA S N P+VE SAK GV++ F
Sbjct: 122 PIVLVGLKADLRKDRNATEVLRTQGLTPVTYQQAQSVALSMNAPYVECSAKENTGVNEVF 181
Query: 674 YTLVREIRKDKVSRDRNS 727
V K S + S
Sbjct: 182 QLAVGLTIKKSFSFSKKS 199
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 39.9 bits (89), Expect = 4e-04
Identities = 21/85 (24%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Frame = +3
Query: 255 SALTIQLIQNHFVDEYDPTIE-DSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTG 431
++L + + + F + Y TI D K + ++ T L + DTAGQE + ++ Y+R
Sbjct: 25 TSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRSLIPSYIRDS 84
Query: 432 EGFLLVFAVNSAKSFEDIGSYREQI 506
++V+ + + SF + + E +
Sbjct: 85 SVAIIVYDITNHNSFVNTEKWIEDV 109
Score = 30.7 bits (66), Expect = 0.23
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +2
Query: 503 DQRVKDAEEVPMVLVGNKCDL-QSWAVDMARAREVAQSYNVPFVETSAK 646
D R + ++V +VLVGNK DL V + A+ + +ETSAK
Sbjct: 108 DVRAERGDDVIIVLVGNKTDLADKRQVTQEEGEKKAKELKIMHMETSAK 156
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 35.5 bits (78), Expect = 0.008
Identities = 16/46 (34%), Positives = 29/46 (63%)
Frame = +3
Query: 348 GETCLLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDI 485
GE C ++ DTAGQE+ +RD Y G+ +++F V S +++++
Sbjct: 56 GEICF-NVWDTAGQEKLGGLRDGYYIQGQCGIIMFDVTSRITYKNV 100
Score = 34.7 bits (76), Expect = 0.014
Identities = 19/61 (31%), Positives = 33/61 (54%)
Frame = +2
Query: 512 VKDAEEVPMVLVGNKCDLQSWAVDMARAREVAQSYNVPFVETSAKTRMGVDDAFYTLVRE 691
V+ E +P+VL GNK D++ V A+A + N+ + + SAK+ + F L R+
Sbjct: 108 VRVCENIPIVLCGNKVDVKERKV-KAKAITFHRKKNLQYYDISAKSNYNFEKPFLWLARK 166
Query: 692 I 694
+
Sbjct: 167 L 167
>SPAC23A1.15c |sec20||SNARE Sec20|Schizosaccharomyces pombe|chr
1|||Manual
Length = 226
Score = 29.5 bits (63), Expect = 0.52
Identities = 18/50 (36%), Positives = 27/50 (54%)
Frame = +2
Query: 575 AVDMARAREVAQSYNVPFVETSAKTRMGVDDAFYTLVREIRKDKVSRDRN 724
AVDM+ + S + +ET + GV+D YT R I+ K+S DR+
Sbjct: 141 AVDMSAENAMELSSSTNLLETLQEKYFGVEDVLYTSKRIIKSLKLS-DRS 189
>SPAC19A8.02 |||transcriptional coactivator |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1213
Score = 27.1 bits (57), Expect = 2.8
Identities = 13/48 (27%), Positives = 23/48 (47%)
Frame = -2
Query: 367 SSKHVSPSITTCLRYESSIVGSYSSTK*FCISCIVNADYQRLPHPQPP 224
S++H++ + L YE+ + SY S K + + + L QPP
Sbjct: 224 SNRHINDQLIRLLSYETKLKESYPSLKRIVSNVFDRIEKEILKRVQPP 271
>SPAC3A11.05c |kms1||meiotic spindle pole body protein
Kms1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 607
Score = 26.2 bits (55), Expect = 4.9
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = -2
Query: 484 MSSKLLALLTANTSKNPSPVRMYWSLIAEYSSWPAVSRMSSKHVSPSITT-CLRYESSI 311
+S L + LTA +S+N V + L E + + SK +SP++ C RY+SS+
Sbjct: 428 ISQSLQSSLTAESSRNKELVAGFLMLSEEIGIQKWIIQSLSK-MSPTLNDFCRRYDSSM 485
>SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 380
Score = 26.2 bits (55), Expect = 4.9
Identities = 13/54 (24%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Frame = +3
Query: 354 TCLLDILDTAGQEEYSAMRDQYMRTGE-GFLLVFAVNSAKSFEDIGSYREQINE 512
+C+LD++ T ++ Y R + M+ + G + +++AK E+ + R++ E
Sbjct: 274 SCMLDLIQTTEEKLYEQYRQEQMKVRQYGEPKLRTIDNAKFKEEEENLRKRFTE 327
>SPAC9G1.05 |||actin cortical patch component Aip1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 595
Score = 26.2 bits (55), Expect = 4.9
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = -3
Query: 402 PNTLPGQPCPGCRVNTSHRRSRLVYGTN 319
P+T P QPC ++ T + R+VY N
Sbjct: 13 PSTKPSQPC---KIGTDFKGERIVYPAN 37
>SPAC57A10.02 |cdr2||GIN4 family protein kinase
Cdr2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 775
Score = 25.8 bits (54), Expect = 6.4
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = -2
Query: 493 YEPMSSKLLALLTANTSKNPSPVRMYWSLIAEYSSWPAVSRMSS 362
Y+ +S+ + A + S N PVR S++AE+ AV + S
Sbjct: 672 YDSVSASISARIKRQNSLNLKPVRFRISVLAEFFGSQAVFVLES 715
>SPAC57A7.06 |||U3 snoRNP protein Utp14 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 929
Score = 25.4 bits (53), Expect = 8.5
Identities = 16/47 (34%), Positives = 21/47 (44%)
Frame = +2
Query: 503 DQRVKDAEEVPMVLVGNKCDLQSWAVDMARAREVAQSYNVPFVETSA 643
D K + VP VL+GN +S+ A+ S PFV SA
Sbjct: 619 DTSQKGEDGVPGVLIGNNTGRRSFKPSEEAAKLSLPSRKNPFVSDSA 665
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,202,461
Number of Sequences: 5004
Number of extensions: 71589
Number of successful extensions: 251
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 220
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 249
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 349251756
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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