Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20236
(578 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284; Eukary... 161 1e-38
UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5; Eukaryot... 150 3e-35
UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal ... 148 8e-35
UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2; Cyt... 130 3e-29
UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26; Eukaryo... 129 5e-29
UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S riboso... 115 7e-25
UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|R... 107 2e-22
UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1; Encephal... 101 9e-21
UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep... 96 6e-19
UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured m... 85 9e-16
UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, wh... 84 3e-15
UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S riboso... 83 6e-15
UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n... 82 1e-14
UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal ... 81 1e-14
UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length... 81 1e-14
UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6; Euryarc... 79 7e-14
UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7; Archaea... 77 2e-13
UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum l... 77 4e-13
UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5; Sulfolo... 76 7e-13
UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 75 2e-12
UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1; ... 74 2e-12
UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3; Halobac... 73 5e-12
UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n... 73 6e-12
UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8; Euthe... 71 1e-11
UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34; Archae... 71 2e-11
UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S riboso... 67 2e-10
UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus N... 67 3e-10
UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n... 66 6e-10
UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n... 62 9e-09
UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1; Cenarch... 62 1e-08
UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella... 61 2e-08
UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n... 61 2e-08
UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiel... 56 5e-07
UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 ... 55 1e-06
UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 55 1e-06
UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 53 6e-06
UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1; Nanoarc... 53 6e-06
UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2; Firmicut... 52 1e-05
UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1; Ch... 51 2e-05
UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22; Bacteri... 50 3e-05
UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3; Mycoplas... 50 3e-05
UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S riboso... 49 9e-05
UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3; Fusobact... 49 9e-05
UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n... 48 1e-04
UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6; Bacteria... 48 1e-04
UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32; Bacteri... 48 1e-04
UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2; Deinococ... 48 2e-04
UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast p... 47 3e-04
UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40; Bacteri... 46 6e-04
UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n... 46 6e-04
UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole ge... 46 9e-04
UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellul... 45 0.001
UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellul... 44 0.002
UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17; Bacteri... 44 0.003
UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellula... 44 0.003
UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5; Bacteria... 43 0.005
UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128; Bacter... 43 0.006
UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellula... 42 0.011
UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8; Bacteria... 41 0.018
UniRef50_UPI0000502977 Cluster: UPI0000502977 related cluster; n... 40 0.056
UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba hi... 39 0.098
UniRef50_UPI000023F324 Cluster: hypothetical protein FG00649.1; ... 38 0.23
UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae ... 38 0.23
UniRef50_A4R1A2 Cluster: Putative uncharacterized protein; n=1; ... 38 0.23
UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7; Chlamydi... 38 0.23
UniRef50_Q4EF76 Cluster: Putative uncharacterized protein; n=1; ... 37 0.30
UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11; Bacteri... 37 0.30
UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9; Firmicut... 37 0.39
UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep... 36 0.69
UniRef50_Q5FFR5 Cluster: 30S ribosomal protein S5; n=5; canis gr... 36 0.69
UniRef50_Q8X048 Cluster: Related to ribosomal protein S5; n=1; N... 36 0.91
UniRef50_Q2GVX5 Cluster: Putative uncharacterized protein; n=1; ... 35 1.2
UniRef50_Q25815 Cluster: Rps5 protein; n=1; Plasmodium falciparu... 35 1.6
UniRef50_P33759 Cluster: 37S ribosomal protein S5, mitochondrial... 35 1.6
UniRef50_UPI000056598D Cluster: UPI000056598D related cluster; n... 34 2.1
UniRef50_A2RAI1 Cluster: Remark: literature about the mitochondr... 34 2.1
UniRef50_A7RP03 Cluster: Predicted protein; n=1; Nematostella ve... 33 4.9
UniRef50_Q86AL0 Cluster: Similar to Dictyostelium discoideum (Sl... 33 6.4
UniRef50_Q9MTD9 Cluster: Ribosomal protein S5; n=1; Toxoplasma g... 32 8.5
>UniRef50_P15880 Cluster: 40S ribosomal protein S2; n=284;
Eukaryota|Rep: 40S ribosomal protein S2 - Homo sapiens
(Human)
Length = 293
Score = 161 bits (391), Expect = 1e-38
Identities = 80/95 (84%), Positives = 84/95 (88%)
Frame = +1
Query: 223 KNRQTREHLLVSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 402
K + E L SLPIKE EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGD
Sbjct: 74 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDY 133
Query: 403 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRG 507
NGH+GLGVKCSKEVATAIRGAIILAKLS++PVRRG
Sbjct: 134 NGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRG 168
Score = 56.8 bits (131), Expect = 3e-07
Identities = 21/23 (91%), Positives = 23/23 (100%)
Frame = +3
Query: 507 FWGNKIGKPHTVPCKVTGKCGSV 575
+WGNKIGKPHTVPCKVTG+CGSV
Sbjct: 169 YWGNKIGKPHTVPCKVTGRCGSV 191
Score = 50.0 bits (114), Expect = 4e-05
Identities = 23/38 (60%), Positives = 27/38 (71%)
Frame = +2
Query: 164 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFLYQSKNS 277
K + KEW+PVTKLGRLV++ KI LE IYLF K S
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLFSLPIKES 91
>UniRef50_O74892 Cluster: 40S ribosomal protein S2; n=5;
Eukaryota|Rep: 40S ribosomal protein S2 -
Schizosaccharomyces pombe (Fission yeast)
Length = 253
Score = 150 bits (363), Expect = 3e-35
Identities = 70/106 (66%), Positives = 88/106 (83%), Gaps = 1/106 (0%)
Frame = +1
Query: 223 KNRQTREHLLVSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 402
K + E L SLPIKE++I+D+FL P LNDEV+K++PVQKQTRAGQRTRFKAFV IGD+
Sbjct: 48 KIKSIEEIYLYSLPIKEYQIVDYFL-PRLNDEVMKVVPVQKQTRAGQRTRFKAFVVIGDS 106
Query: 403 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGS-GVTRSESHT 537
+GH+GLG+KC+KEVATAIRGAII+ KLS++P+RRG G + HT
Sbjct: 107 DGHVGLGIKCAKEVATAIRGAIIMGKLSIMPIRRGYWGTALGDPHT 152
Score = 51.2 bits (117), Expect = 2e-05
Identities = 20/31 (64%), Positives = 27/31 (87%)
Frame = +2
Query: 164 KEDQKEWVPVTKLGRLVREGKIDKLESIYLF 256
++++KEWVPVTKLGRLV+ GKI +E IYL+
Sbjct: 28 RDEEKEWVPVTKLGRLVKAGKIKSIEEIYLY 58
Score = 46.4 bits (105), Expect = 5e-04
Identities = 17/24 (70%), Positives = 20/24 (83%)
Frame = +3
Query: 507 FWGNKIGKPHTVPCKVTGKCGSVT 578
+WG +G PHTVP KV+GKCGSVT
Sbjct: 142 YWGTALGDPHTVPVKVSGKCGSVT 165
>UniRef50_UPI0000D9B7B9 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to ribosomal protein S2 - Macaca mulatta
Length = 272
Score = 148 bits (359), Expect = 8e-35
Identities = 75/95 (78%), Positives = 79/95 (83%)
Frame = +1
Query: 223 KNRQTREHLLVSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 402
K + E L SLPIKE EIIDFFLG SL DEVLKIMPVQKQT AGQ TRFKAFV IGD
Sbjct: 14 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTCAGQHTRFKAFVPIGDY 73
Query: 403 NGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRG 507
NGH+GL VKCSKEVATAIRGAIILAKLS++PV RG
Sbjct: 74 NGHVGLSVKCSKEVATAIRGAIILAKLSIVPVCRG 108
Score = 54.4 bits (125), Expect = 2e-06
Identities = 20/23 (86%), Positives = 22/23 (95%)
Frame = +3
Query: 507 FWGNKIGKPHTVPCKVTGKCGSV 575
+WGNKIGKPHTVPCKVTG+C SV
Sbjct: 109 YWGNKIGKPHTVPCKVTGRCSSV 131
Score = 35.9 bits (79), Expect = 0.69
Identities = 17/31 (54%), Positives = 20/31 (64%)
Frame = +2
Query: 185 VPVTKLGRLVREGKIDKLESIYLFLYQSKNS 277
+PVTKLG L+ + KI LE IYLF K S
Sbjct: 1 MPVTKLGHLINDMKIKSLEEIYLFSLPIKES 31
>UniRef50_A4S964 Cluster: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2; n=12;
Eukaryota|Rep: Cytosolic 80S ribosomal protein S2;
Cytosolic 40S small ribosomal subunit protein S2 -
Ostreococcus lucimarinus CCE9901
Length = 273
Score = 130 bits (313), Expect = 3e-29
Identities = 65/101 (64%), Positives = 79/101 (78%), Gaps = 2/101 (1%)
Frame = +1
Query: 241 EHL-LVSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIG 417
EH+ L SLPIKE +I++ F+G L DEV+KI PVQKQT AGQR RFKAFV +GD NGHIG
Sbjct: 69 EHIFLFSLPIKEHQIVEHFIGGELKDEVMKICPVQKQTTAGQRMRFKAFVVVGDCNGHIG 128
Query: 418 LGVKCSKEVATAIRGAIILAKLSVLPVRRGS-GVTRSESHT 537
LGVK KEVA +I+G++ILAKL+++PVRRG G E HT
Sbjct: 129 LGVKACKEVAHSIQGSMILAKLNIVPVRRGYWGSKLGEPHT 169
Score = 46.4 bits (105), Expect = 5e-04
Identities = 16/23 (69%), Positives = 21/23 (91%)
Frame = +3
Query: 507 FWGNKIGKPHTVPCKVTGKCGSV 575
+WG+K+G+PHT+P KV GKCGSV
Sbjct: 159 YWGSKLGEPHTIPTKVHGKCGSV 181
Score = 45.2 bits (102), Expect = 0.001
Identities = 19/30 (63%), Positives = 24/30 (80%)
Frame = +2
Query: 167 EDQKEWVPVTKLGRLVREGKIDKLESIYLF 256
+D+ WVP TKLGRLV++GKI LE I+LF
Sbjct: 45 DDKDVWVPCTKLGRLVQQGKIKSLEHIFLF 74
>UniRef50_P25443 Cluster: 40S ribosomal protein S2; n=26;
Eukaryota|Rep: 40S ribosomal protein S2 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 254
Score = 129 bits (311), Expect = 5e-29
Identities = 64/100 (64%), Positives = 77/100 (77%), Gaps = 1/100 (1%)
Frame = +1
Query: 241 EHLLVSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGL 420
E L SLP+KEF+IID L P L DEV+ I PVQKQTRAGQRTRFKA V +GD+NGH+GL
Sbjct: 55 EIFLHSLPVKEFQIIDTLL-PGLQDEVMNIKPVQKQTRAGQRTRFKAVVVVGDSNGHVGL 113
Query: 421 GVKCSKEVATAIRGAIILAKLSVLPVRRGS-GVTRSESHT 537
G+K +KEVA AIR II+AKLSV+P+RRG G + H+
Sbjct: 114 GIKTAKEVAGAIRAGIIIAKLSVIPIRRGYWGTNLGQPHS 153
Score = 43.6 bits (98), Expect = 0.003
Identities = 18/28 (64%), Positives = 23/28 (82%)
Frame = +2
Query: 170 DQKEWVPVTKLGRLVREGKIDKLESIYL 253
++K WVPVTKLGRLV+ GKI +E I+L
Sbjct: 31 EEKGWVPVTKLGRLVKAGKITTIEEIFL 58
Score = 41.5 bits (93), Expect = 0.014
Identities = 14/24 (58%), Positives = 19/24 (79%)
Frame = +3
Query: 507 FWGNKIGKPHTVPCKVTGKCGSVT 578
+WG +G+PH++ K TGKCGSVT
Sbjct: 143 YWGTNLGQPHSLATKTTGKCGSVT 166
>UniRef50_UPI00005A5FBC Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 237
Score = 115 bits (277), Expect = 7e-25
Identities = 56/65 (86%), Positives = 60/65 (92%)
Frame = +1
Query: 313 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 492
DEVLKIMPVQKQT AGQRTRF AFVAIGD NGH GLGVKCSKEVATAIR AIILAKLS++
Sbjct: 48 DEVLKIMPVQKQTCAGQRTRFTAFVAIGDYNGHFGLGVKCSKEVATAIREAIILAKLSIV 107
Query: 493 PVRRG 507
P+R+G
Sbjct: 108 PLRQG 112
Score = 52.8 bits (121), Expect = 6e-06
Identities = 20/23 (86%), Positives = 22/23 (95%)
Frame = +3
Query: 507 FWGNKIGKPHTVPCKVTGKCGSV 575
+WGNKIGKP+TVPCKVTG CGSV
Sbjct: 113 YWGNKIGKPNTVPCKVTGHCGSV 135
>UniRef50_O55213 Cluster: Ribosomal protein S2; n=11; Coelomata|Rep:
Ribosomal protein S2 - Rattus norvegicus (Rat)
Length = 121
Score = 107 bits (257), Expect = 2e-22
Identities = 53/66 (80%), Positives = 55/66 (83%)
Frame = +1
Query: 223 KNRQTREHLLVSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 402
K + E L SLPIKE EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFKAFVAIGD
Sbjct: 49 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDY 108
Query: 403 NGHIGL 420
NGH+GL
Sbjct: 109 NGHVGL 114
Score = 50.8 bits (116), Expect = 2e-05
Identities = 23/38 (60%), Positives = 27/38 (71%)
Frame = +2
Query: 164 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFLYQSKNS 277
K + KEW+PVTKLGRLV++ KI LE IYLF K S
Sbjct: 29 KAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKES 66
>UniRef50_Q8SRG6 Cluster: 40S RIBOSOMAL PROTEIN S2; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S2 -
Encephalitozoon cuniculi
Length = 242
Score = 101 bits (243), Expect = 9e-21
Identities = 48/81 (59%), Positives = 59/81 (72%)
Frame = +1
Query: 265 IKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEV 444
I+E EI+D G S+ +EVL I VQKQTRAGQ+TR KA V +GD GH+G+G K SKE
Sbjct: 49 IREPEIVDLLCGNSIKEEVLSIKSVQKQTRAGQKTRIKAVVVVGDRKGHVGIGTKASKEA 108
Query: 445 ATAIRGAIILAKLSVLPVRRG 507
A+AIRGAI AK ++ PVR G
Sbjct: 109 ASAIRGAIARAKCAIRPVRLG 129
Score = 35.9 bits (79), Expect = 0.69
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +2
Query: 164 KEDQKEWVPVTKLGRLVREGKIDKLESIYLF 256
++++ EW+P T +GRLV+ KI LE I+ F
Sbjct: 15 RKEESEWIPKTAVGRLVKMLKITSLEQIFKF 45
Score = 35.9 bits (79), Expect = 0.69
Identities = 13/21 (61%), Positives = 15/21 (71%)
Frame = +3
Query: 510 WGNKIGKPHTVPCKVTGKCGS 572
W GKPHTV CK +GKCG+
Sbjct: 131 WDGAQGKPHTVSCKGSGKCGT 151
>UniRef50_Q8TBR1 Cluster: MGC27348 protein; n=1; Homo sapiens|Rep:
MGC27348 protein - Homo sapiens (Human)
Length = 172
Score = 95.9 bits (228), Expect = 6e-19
Identities = 48/65 (73%), Positives = 52/65 (80%)
Frame = +1
Query: 223 KNRQTREHLLVSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 402
K + E L SLPIKE EIIDFFLG SL DEVLKIMPV+K+TRAGQRTRFKAFVAI D
Sbjct: 2 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVRKETRAGQRTRFKAFVAIRDY 61
Query: 403 NGHIG 417
NG+ G
Sbjct: 62 NGYAG 66
Score = 34.3 bits (75), Expect = 2.1
Identities = 14/28 (50%), Positives = 20/28 (71%)
Frame = +2
Query: 491 YQFEEVLG*QDRKATHRPLQGHRQVWFC 574
++ + +LG QDR+A HRPLQG R + C
Sbjct: 91 HRAQRLLGEQDRQAPHRPLQGDRPLRLC 118
>UniRef50_Q673Q8 Cluster: Ribosomal protein S5; n=1; uncultured
marine group II euryarchaeote DeepAnt-JyKC7|Rep:
Ribosomal protein S5 - uncultured marine group II
euryarchaeote DeepAnt-JyKC7
Length = 202
Score = 85.4 bits (202), Expect = 9e-16
Identities = 41/91 (45%), Positives = 62/91 (68%)
Frame = +1
Query: 241 EHLLVSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGL 420
E L LPI+E EI+D L P L+D+VL + +Q+ T +G+R RF +G+++G++GL
Sbjct: 12 EALATGLPIREVEIVDALL-PGLDDDVLAVNMIQRMTDSGRRVRFNVLCVVGNSDGYVGL 70
Query: 421 GVKCSKEVATAIRGAIILAKLSVLPVRRGSG 513
+ KEVA+ IR AI AKL+++PV RG+G
Sbjct: 71 AICKGKEVASTIRKAIDKAKLNMIPVMRGNG 101
>UniRef50_A0E2R7 Cluster: Chromosome undetermined scaffold_75, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_75,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 327
Score = 83.8 bits (198), Expect = 3e-15
Identities = 41/68 (60%), Positives = 54/68 (79%)
Frame = +1
Query: 256 SLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCS 435
S+PIKE++I+D FL +L +E L I PVQKQT AGQ+TRFKA+V +GD++ HIGLG K +
Sbjct: 89 SIPIKEYQIVDHFL-KTLKEEPLAIGPVQKQTCAGQKTRFKAYVVVGDSHQHIGLGWKSA 147
Query: 436 KEVATAIR 459
KEV AI+
Sbjct: 148 KEVQGAIQ 155
Score = 44.0 bits (99), Expect = 0.003
Identities = 18/28 (64%), Positives = 24/28 (85%)
Frame = +2
Query: 173 QKEWVPVTKLGRLVREGKIDKLESIYLF 256
++EWVP+TKLGRLV+ GKI LE+I+ F
Sbjct: 61 EQEWVPLTKLGRLVKGGKIKSLETIFQF 88
>UniRef50_UPI00005A548A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to 40S ribosomal protein S2 - Canis familiaris
Length = 213
Score = 82.6 bits (195), Expect = 6e-15
Identities = 38/48 (79%), Positives = 43/48 (89%)
Frame = +1
Query: 364 RTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRG 507
+ RFKAFVAIGD+NG +G GVKCSKE ATAIRGA+ILAKLS+LPV RG
Sbjct: 61 KIRFKAFVAIGDDNGQVGPGVKCSKEAATAIRGAVILAKLSILPVPRG 108
Score = 47.2 bits (107), Expect = 3e-04
Identities = 18/23 (78%), Positives = 21/23 (91%)
Frame = +3
Query: 507 FWGNKIGKPHTVPCKVTGKCGSV 575
+WGN+I KPHTVP KVTG+CGSV
Sbjct: 109 YWGNEIRKPHTVPGKVTGRCGSV 131
Score = 33.5 bits (73), Expect = 3.7
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +2
Query: 170 DQKEWVPVTKLGRLVREGKI 229
+ KEW+PVT LGRLV++ KI
Sbjct: 43 EDKEWIPVTGLGRLVKDMKI 62
>UniRef50_UPI0000DC060C Cluster: UPI0000DC060C related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC060C UniRef100 entry -
Rattus norvegicus
Length = 206
Score = 81.8 bits (193), Expect = 1e-14
Identities = 53/100 (53%), Positives = 62/100 (62%), Gaps = 1/100 (1%)
Frame = +1
Query: 241 EHLLVSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGL 420
E L SLPIKE EIID FLG +L DEVLK +P QK TR GQ +KA GD NGH+
Sbjct: 68 EIYLFSLPIKETEIIDIFLGAALKDEVLKSLPEQKGTRVGQ--YYKA----GDYNGHVIT 121
Query: 421 GVKCSKEVATAIRGAIILAKLSVLPVRRG-SGVTRSESHT 537
G+ EVA I+ IIL KL ++PV RG G S+ HT
Sbjct: 122 GL---DEVANTIQRVIILTKLPIVPVWRGYCGSKTSKPHT 158
Score = 32.3 bits (70), Expect = 8.5
Identities = 15/24 (62%), Positives = 18/24 (75%)
Frame = +3
Query: 507 FWGNKIGKPHTVPCKVTGKCGSVT 578
+ G+K KPHTV CKVTG GSV+
Sbjct: 148 YCGSKTSKPHTVLCKVTGH-GSVS 170
>UniRef50_UPI0000E20F35 Cluster: PREDICTED: similar to ribosomal
protein S2; n=1; Pan troglodytes|Rep: PREDICTED: similar
to ribosomal protein S2 - Pan troglodytes
Length = 223
Score = 81.4 bits (192), Expect = 1e-14
Identities = 45/109 (41%), Positives = 62/109 (56%)
Frame = +1
Query: 163 QGRPERVGSCHQTRPSCSRRKNRQTREHLLVSLPIKEFEIIDFFLGPSLNDEVLKIMPVQ 342
QG + P K + + +L SLPIKEFE+ DF LG L D+VLK+M VQ
Sbjct: 116 QGLAPELSKAASESPQVKDMKMKSLKVYLF-SLPIKEFEVTDFLLGVPLKDKVLKLMFVQ 174
Query: 343 KQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV 489
KQ +AG+R RFK V I D N ++ LGV+ KE+ A+ +L+ + V
Sbjct: 175 KQPKAGRRIRFKVIVTIRDCNDNVSLGVEWPKELLIAVCRTNVLSIILV 223
>UniRef50_Q9DC49 Cluster: Adult male lung cDNA, RIKEN full-length
enriched library, clone:1200003H09 product:ribosomal
protein S2, full insert sequence; n=13; Eutheria|Rep:
Adult male lung cDNA, RIKEN full-length enriched
library, clone:1200003H09 product:ribosomal protein S2,
full insert sequence - Mus musculus (Mouse)
Length = 235
Score = 81.4 bits (192), Expect = 1e-14
Identities = 41/52 (78%), Positives = 42/52 (80%)
Frame = +1
Query: 223 KNRQTREHLLVSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFK 378
K + E L SLPIKE EIIDFFLG SL DEVLKIMPVQKQTRAGQRTRFK
Sbjct: 74 KIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFK 125
Score = 50.8 bits (116), Expect = 2e-05
Identities = 23/38 (60%), Positives = 27/38 (71%)
Frame = +2
Query: 164 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFLYQSKNS 277
K + KEW+PVTKLGRLV++ KI LE IYLF K S
Sbjct: 54 KAEDKEWIPVTKLGRLVKDMKIKSLEEIYLFSLPIKES 91
>UniRef50_Q6LXD3 Cluster: 30S ribosomal protein S5P; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S5P -
Methanococcus maripaludis
Length = 225
Score = 79.0 bits (186), Expect = 7e-14
Identities = 40/85 (47%), Positives = 59/85 (69%)
Frame = +1
Query: 259 LPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSK 438
LP+ E EI+D L P L ++VL + VQ+ ++G+R R++A V +G+ NG++G+G+ SK
Sbjct: 42 LPLLEPEIVDALL-PDLEEQVLDVKLVQRMHKSGRRARYRATVVVGNKNGYVGVGMGKSK 100
Query: 439 EVATAIRGAIILAKLSVLPVRRGSG 513
EV AIR AI AKLS++ VR G G
Sbjct: 101 EVGPAIRKAIAHAKLSLIKVRVGCG 125
>UniRef50_Q6L1A7 Cluster: 30S ribosomal protein S5P; n=7;
Archaea|Rep: 30S ribosomal protein S5P - Picrophilus
torridus
Length = 221
Score = 77.4 bits (182), Expect = 2e-13
Identities = 36/91 (39%), Positives = 59/91 (64%)
Frame = +1
Query: 241 EHLLVSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGL 420
E L LP+KE++I+D+ + P L DEV+ I Q+ T +G+R + +G+ NG++G+
Sbjct: 25 EALHSKLPLKEYQIVDYLI-PDLKDEVINIERAQRMTDSGRRMNYSITAVVGNGNGYVGV 83
Query: 421 GVKCSKEVATAIRGAIILAKLSVLPVRRGSG 513
G +KE A AI+ AI AKL+++ ++RG G
Sbjct: 84 GRGKAKEAAPAIKKAIDNAKLNIIEIKRGCG 114
>UniRef50_A7D107 Cluster: Ribosomal protein S5; n=1; Halorubrum
lacusprofundi ATCC 49239|Rep: Ribosomal protein S5 -
Halorubrum lacusprofundi ATCC 49239
Length = 265
Score = 76.6 bits (180), Expect = 4e-13
Identities = 43/99 (43%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
Frame = +1
Query: 259 LPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSK 438
LP+KE EI+D L P L DEVL I VQ+ T +G+R +F+ VA+G+ +G++G
Sbjct: 84 LPLKEAEIVDQLL-PGLEDEVLDINMVQRMTDSGRRVKFRCVVAVGNRDGYLGYAQARDD 142
Query: 439 EVATAIRGAIILAKLSVLPVRRGSGVTRSE-SHTPSLAR 552
+V AI+ AI +AKL+++ V RGSG + T SL R
Sbjct: 143 QVGGAIQKAIDVAKLNIIEVDRGSGSWEDQPGGTNSLTR 181
>UniRef50_Q9UX87 Cluster: 30S ribosomal protein S5P; n=5;
Sulfolobaceae|Rep: 30S ribosomal protein S5P -
Sulfolobus solfataricus
Length = 214
Score = 75.8 bits (178), Expect = 7e-13
Identities = 39/86 (45%), Positives = 59/86 (68%)
Frame = +1
Query: 256 SLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCS 435
+LPI E EI+D L P L EV+ I VQKQT AG+ +R+K V +G+ +G++ +G +
Sbjct: 38 NLPITEPEIVDVLL-PKLKYEVVDIKVVQKQTDAGEISRYKVLVIMGNMDGYVSIGTGKA 96
Query: 436 KEVATAIRGAIILAKLSVLPVRRGSG 513
K++ AI+ AI AK++++PVRRG G
Sbjct: 97 KQLRVAIQKAIRDAKMNIIPVRRGCG 122
>UniRef50_Q6CKL2 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome F of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=1; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome F of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 262
Score = 74.5 bits (175), Expect = 2e-12
Identities = 39/86 (45%), Positives = 59/86 (68%)
Frame = -3
Query: 513 PRTSSNW*NRQLSKDNSASNGSGDFLAALHTQTNMTVVVANGNKCLETCALSGTCLFLYR 334
P TSS+W N QL D++ S+G+ +FL+ L+TQT++TV V N + LE+ +L+ + L L R
Sbjct: 113 PVTSSDWDNGQLGDDDTGSDGTSNFLSGLNTQTDVTVGVTNDDDSLESGSLTSSGLLLDR 172
Query: 333 HDL*NLIIQGRAEEEINDLEFFDW*R 256
D+ N I+Q ++ +NDLEF DW R
Sbjct: 173 LDVHNFILQ-VWQQLVNDLEFLDWQR 197
>UniRef50_Q16TN2 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 181
Score = 74.1 bits (174), Expect = 2e-12
Identities = 38/83 (45%), Positives = 56/83 (67%)
Frame = -3
Query: 513 PRTSSNW*NRQLSKDNSASNGSGDFLAALHTQTNMTVVVANGNKCLETCALSGTCLFLYR 334
P S++ N QL +D+S ++G G FLAAL QT++ V V +G++ LE L+GT L L
Sbjct: 32 PVASTHRNNGQLGQDDSPTDGGGHFLAALDAQTDVAVAVTDGDEGLEARTLTGTGLLLDG 91
Query: 333 HDL*NLIIQGRAEEEINDLEFFD 265
HDL + ++Q A+EEI+DLE F+
Sbjct: 92 HDLQHFVLQRAAQEEIDDLELFN 114
>UniRef50_P26815 Cluster: 30S ribosomal protein S5P; n=3;
Halobacteriaceae|Rep: 30S ribosomal protein S5P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 212
Score = 72.9 bits (171), Expect = 5e-12
Identities = 39/92 (42%), Positives = 58/92 (63%)
Frame = +1
Query: 238 REHLLVSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIG 417
+E L LP+KE E++D + P L DEVL I VQ+ T +G+R +F+ VA+G+ +G IG
Sbjct: 26 QEALNSGLPLKESEVVDQLV-PDLEDEVLDINMVQRMTDSGRRVKFRCVVAVGNRDGLIG 84
Query: 418 LGVKCSKEVATAIRGAIILAKLSVLPVRRGSG 513
+V AI+ AI +AKL+++ V RG G
Sbjct: 85 YAEGRDDQVGGAIQKAIDIAKLNIIDVSRGCG 116
>UniRef50_UPI0000D62CF0 Cluster: UPI0000D62CF0 related cluster; n=1;
Mus musculus|Rep: UPI0000D62CF0 UniRef100 entry - Mus
musculus
Length = 215
Score = 72.5 bits (170), Expect = 6e-12
Identities = 38/66 (57%), Positives = 48/66 (72%)
Frame = +1
Query: 259 LPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSK 438
LP+KEFEI DFFL SL D+VLKI+P+ + R Q TRF +F I + GH G+GVKCSK
Sbjct: 18 LPVKEFEINDFFLEASLKDKVLKIIPLSR-FRNDQWTRFNSFDTI-NYGGHNGIGVKCSK 75
Query: 439 EVATAI 456
+V TA+
Sbjct: 76 KVGTAV 81
>UniRef50_UPI0000500CC2 Cluster: ribosomal protein S2; n=8;
Eutheria|Rep: ribosomal protein S2 - Rattus norvegicus
Length = 233
Score = 71.3 bits (167), Expect = 1e-11
Identities = 37/52 (71%), Positives = 39/52 (75%)
Frame = +1
Query: 223 KNRQTREHLLVSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFK 378
K + E L SLPIK EIIDFFLG SL +EVLK MPVQKQTRAGQ TRFK
Sbjct: 74 KIKSLEEIYLFSLPIKGSEIIDFFLGASLKNEVLKTMPVQKQTRAGQWTRFK 125
Score = 46.8 bits (106), Expect = 4e-04
Identities = 21/38 (55%), Positives = 25/38 (65%)
Frame = +2
Query: 164 KEDQKEWVPVTKLGRLVREGKIDKLESIYLFLYQSKNS 277
K + KEW+P TKLG LV++ KI LE IYLF K S
Sbjct: 54 KAEDKEWIPFTKLGHLVKDMKIKSLEEIYLFSLPIKGS 91
>UniRef50_Q8U017 Cluster: 30S ribosomal protein S5P; n=34;
Archaea|Rep: 30S ribosomal protein S5P - Pyrococcus
furiosus
Length = 236
Score = 70.9 bits (166), Expect = 2e-11
Identities = 39/87 (44%), Positives = 55/87 (63%), Gaps = 4/87 (4%)
Frame = +1
Query: 265 IKEFEIIDFFLGPSLN----DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKC 432
IKE EIID L P +N EVL I + T +G+R RF+ A+G+ +G++GLG+
Sbjct: 44 IKEPEIIDVLL-PEVNARENQEVLDIALTVRMTDSGRRVRFRVLAAVGNRDGYVGLGIGH 102
Query: 433 SKEVATAIRGAIILAKLSVLPVRRGSG 513
KEV AIR AI AKL+++ ++RG G
Sbjct: 103 GKEVGIAIRKAINYAKLNIIEIKRGCG 129
Score = 34.3 bits (75), Expect = 2.1
Identities = 15/31 (48%), Positives = 20/31 (64%)
Frame = +2
Query: 179 EWVPVTKLGRLVREGKIDKLESIYLFLYQSK 271
EW P TKLG +V+EG+I + I+ YQ K
Sbjct: 15 EWEPKTKLGMMVKEGQITDIHEIFRRGYQIK 45
>UniRef50_UPI0000D9ACAD Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 170
Score = 67.3 bits (157), Expect = 2e-10
Identities = 37/75 (49%), Positives = 47/75 (62%)
Frame = +1
Query: 250 LVSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVK 429
L S PIKEFE+ DF L L D+VLK+M V+KQ AG+ RFK V I N ++ LGV+
Sbjct: 10 LFSRPIKEFEVTDFLLEVPLKDKVLKLMFVKKQPEAGRWIRFKVIVTIRYCNDNVSLGVE 69
Query: 430 CSKEVATAIRGAIIL 474
KE+ A+ IIL
Sbjct: 70 RPKELLIAVCRTIIL 84
>UniRef50_A7DRN6 Cluster: Ribosomal protein S5; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein S5
- Candidatus Nitrosopumilus maritimus SCM1
Length = 238
Score = 66.9 bits (156), Expect = 3e-10
Identities = 39/91 (42%), Positives = 54/91 (59%)
Frame = +1
Query: 241 EHLLVSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGL 420
E + + L I+E II L P L EV+ + +QK T GQ TRFKA VA G+ NG++G+
Sbjct: 66 EIIELGLRIQEAGIIKKLL-PDLKSEVVDVGIIQKMTSNGQSTRFKAIVATGNENGYLGI 124
Query: 421 GVKCSKEVATAIRGAIILAKLSVLPVRRGSG 513
G SK++ AI A A L+V P++ G G
Sbjct: 125 GQGKSKQMRIAIEKATNAAYLNVNPIKMGCG 155
>UniRef50_UPI0000DBFACC Cluster: UPI0000DBFACC related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DBFACC UniRef100 entry -
Rattus norvegicus
Length = 172
Score = 66.1 bits (154), Expect = 6e-10
Identities = 29/57 (50%), Positives = 38/57 (66%)
Frame = +1
Query: 340 QKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGS 510
QKQT+ GQ+ R K F GD NGH+GLG+KCSKEVATA +G + +L + R +
Sbjct: 1 QKQTQTGQKNRLKTFCCYGDYNGHVGLGIKCSKEVATAFQGLWVKMQLGETRLSRST 57
>UniRef50_UPI000057EB46 Cluster: UPI000057EB46 related cluster; n=1;
Bos taurus|Rep: UPI000057EB46 UniRef100 entry - Bos
Taurus
Length = 258
Score = 62.1 bits (144), Expect = 9e-09
Identities = 44/99 (44%), Positives = 55/99 (55%), Gaps = 3/99 (3%)
Frame = +1
Query: 247 LLVSLPIKEFEIIDFFLGPSLNDEVLKIM---PVQKQTRAGQRTRFKAFVAIGDNNGHIG 417
L+ + IK E I FF S N L P+ KQT Q+TRFKA V +G + GH+
Sbjct: 63 LVKEMKIKSLEEIYFFSLLSRNLRSLTFSWEHPLIKQTCTDQQTRFKASVTVG-SYGHVS 121
Query: 418 LGVKCSKEVATAIRGAIILAKLSVLPVRRGSGVTRSESH 534
LG+K S EVA IILAKLS++PV +G R E H
Sbjct: 122 LGIKYSMEVA------IILAKLSIIPVETATGGKRLEPH 154
Score = 48.0 bits (109), Expect = 2e-04
Identities = 23/45 (51%), Positives = 29/45 (64%)
Frame = +2
Query: 173 QKEWVPVTKLGRLVREGKIDKLESIYLFLYQSKNSRSLISSSARP 307
+ +W+P+TKLG LV+E KI LE IY F S+N RSL S P
Sbjct: 51 EDKWLPITKLGCLVKEMKIKSLEEIYFFSLLSRNLRSLTFSWEHP 95
Score = 35.5 bits (78), Expect = 0.91
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +3
Query: 513 GNKIGKPHTVPCKVTGKCGSV 575
G K +PH VPC+VTG+CGS+
Sbjct: 147 GGKRLEPHMVPCRVTGRCGSL 167
>UniRef50_A0RUE7 Cluster: 30S ribosomal protein S5P; n=1;
Cenarchaeum symbiosum|Rep: 30S ribosomal protein S5P -
Cenarchaeum symbiosum
Length = 219
Score = 61.7 bits (143), Expect = 1e-08
Identities = 36/83 (43%), Positives = 50/83 (60%)
Frame = +1
Query: 265 IKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEV 444
I+E II L P L EV+ + +QK T GQ TRFKA VA G+ NG++G+G +K++
Sbjct: 55 IQESGIIKKLL-PDLKTEVVDVGIIQKMTSNGQSTRFKAIVAAGNENGYLGIGQGKAKQM 113
Query: 445 ATAIRGAIILAKLSVLPVRRGSG 513
AI A A L+V P++ G G
Sbjct: 114 RIAIEKANNQALLNVGPIKLGCG 136
>UniRef50_Q3LVZ1 Cluster: Ribosomal protein S2; n=1; Bigelowiella
natans|Rep: Ribosomal protein S2 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 266
Score = 61.3 bits (142), Expect = 2e-08
Identities = 27/77 (35%), Positives = 50/77 (64%)
Frame = +1
Query: 277 EIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAI 456
++++ G SL +V++ + V + T++G++ + K V +GD +GH+GLGVK S + I
Sbjct: 98 KLVNILFGKSLKYKVIQNLMVSRLTKSGRQYKKKVAVLVGDLDGHVGLGVKSSMDSKAGI 157
Query: 457 RGAIILAKLSVLPVRRG 507
+ A+ AKL++ +RRG
Sbjct: 158 KAALRKAKLAITKIRRG 174
>UniRef50_UPI0000EB449D Cluster: UPI0000EB449D related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB449D UniRef100
entry - Canis familiaris
Length = 196
Score = 60.9 bits (141), Expect = 2e-08
Identities = 39/87 (44%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Frame = +1
Query: 286 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 465
D L ++ + ++I +K+T AGQ+TRFKAFV D NGH+ L EVATAIRGA
Sbjct: 1 DMSLLAAVKGKGIRIKSYKKKTHAGQQTRFKAFVVFRDYNGHVSL------EVATAIRGA 54
Query: 466 IILAKLSVLPVRRG-SGVTRSESHTPS 543
IIL + S+ G SG ++ HT S
Sbjct: 55 IILDRSSIAIAWGGWSGNKIAKPHTVS 81
>UniRef50_Q7XYL2 Cluster: Ribosomal protein rpS5; n=1; Bigelowiella
natans|Rep: Ribosomal protein rpS5 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 219
Score = 56.4 bits (130), Expect = 5e-07
Identities = 26/67 (38%), Positives = 40/67 (59%)
Frame = +1
Query: 298 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 477
GP ++VL++ + K + G+ F+A VA+GD NG IGLG +KEV A+ A + A
Sbjct: 68 GPRFEEKVLQVRRITKVVKGGKNMGFRALVAVGDKNGKIGLGCASAKEVMVAVEKASMEA 127
Query: 478 KLSVLPV 498
K + + V
Sbjct: 128 KKTAITV 134
>UniRef50_UPI0000DC0CDD Cluster: RBM27_MOUSE Isoform 2 of Q5SFM8 -
Mus musculus (Mouse); n=3; Murinae|Rep: RBM27_MOUSE
Isoform 2 of Q5SFM8 - Mus musculus (Mouse) - Rattus
norvegicus
Length = 266
Score = 55.2 bits (127), Expect = 1e-06
Identities = 36/67 (53%), Positives = 41/67 (61%)
Frame = +1
Query: 256 SLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCS 435
SL K+ II FFL SL DE IMPVQ QT R FK FV+I D + H+ L KCS
Sbjct: 84 SLLNKKSMIIGFFLRTSLRDE---IMPVQTQTWLPSRP-FKDFVSIRDYSSHVDLDDKCS 139
Query: 436 KEVATAI 456
K+ ATAI
Sbjct: 140 KKTATAI 146
>UniRef50_O15579 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 136
Score = 54.8 bits (126), Expect = 1e-06
Identities = 28/54 (51%), Positives = 36/54 (66%)
Frame = +1
Query: 259 LPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGL 420
+ IKE++I+D L L +EV+ I VQKQT G+ R KA VAIGD+NGH L
Sbjct: 60 IKIKEYQIVDHLLS-RLKEEVMTIDQVQKQTSRGKEPRLKASVAIGDHNGHRAL 112
Score = 34.3 bits (75), Expect = 2.1
Identities = 13/23 (56%), Positives = 19/23 (82%)
Frame = +2
Query: 188 PVTKLGRLVREGKIDKLESIYLF 256
PVTKLGRLV++GK+ ++ I+ F
Sbjct: 36 PVTKLGRLVKDGKVKSIDQIFEF 58
>UniRef50_P59123 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Oceanobacillus
iheyensis
Length = 167
Score = 52.8 bits (121), Expect = 6e-06
Identities = 25/64 (39%), Positives = 39/64 (60%)
Frame = +1
Query: 307 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 486
L + V+ + V K + G+R RF A V +GD NGH+G G ++EV AI+ A+ AK +
Sbjct: 12 LEERVVTVNRVAKVVKGGRRFRFAALVVVGDKNGHVGFGTGKAQEVPEAIKKAVDDAKKN 71
Query: 487 VLPV 498
++ V
Sbjct: 72 LISV 75
>UniRef50_Q74MD4 Cluster: 30S ribosomal protein S5P; n=1;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S5P -
Nanoarchaeum equitans
Length = 231
Score = 52.8 bits (121), Expect = 6e-06
Identities = 23/58 (39%), Positives = 37/58 (63%)
Frame = +1
Query: 340 QKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRRGSG 513
QK+T G +TR++ +GD +GH+G+G+ S ++ A AI AKL+++ V RG G
Sbjct: 72 QKKTAEGNKTRYEVIAIVGDKDGHVGVGLGRSSDLLIAREKAINRAKLNIIKVARGCG 129
Score = 37.1 bits (82), Expect = 0.30
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +2
Query: 176 KEWVPVTKLGRLVREGKIDKLESI 247
+EW P TKLGRLV+EGKI ++ I
Sbjct: 5 EEWQPKTKLGRLVKEGKITNIDEI 28
>UniRef50_Q9PQP3 Cluster: 30S ribosomal protein S5; n=2;
Firmicutes|Rep: 30S ribosomal protein S5 - Ureaplasma
parvum (Ureaplasma urealyticum biotype 1)
Length = 203
Score = 51.6 bits (118), Expect = 1e-05
Identities = 26/67 (38%), Positives = 40/67 (59%)
Frame = +1
Query: 304 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 483
+ + V+KI + K T+ G+ RF A V IGD NG +G G+ S EV AI+ AI A
Sbjct: 48 NFEERVVKIKRISKTTKGGRMMRFSALVVIGDKNGTVGFGMGKSIEVPDAIKKAIKNANN 107
Query: 484 SVLPVRR 504
+++ V++
Sbjct: 108 NLIKVKQ 114
>UniRef50_Q7Y258 Cluster: Ribosomal protein S5 precursor; n=1;
Chlamydomonas reinhardtii|Rep: Ribosomal protein S5
precursor - Chlamydomonas reinhardtii
Length = 673
Score = 51.2 bits (117), Expect = 2e-05
Identities = 24/71 (33%), Positives = 43/71 (60%)
Frame = +1
Query: 286 DFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 465
DF G + + ++++ V K + G+ F+ IG+ NG +G+G + +EVATA++ A
Sbjct: 506 DFDDGENWQERIIELSRVTKVVKGGKLMGFRCTAIIGNGNGLVGVGCQAGREVATAVKRA 565
Query: 466 IILAKLSVLPV 498
++ AK SV+ V
Sbjct: 566 LVDAKKSVVRV 576
>UniRef50_Q6YR05 Cluster: 30S ribosomal protein S5; n=22;
Bacteria|Rep: 30S ribosomal protein S5 - Onion yellows
phytoplasma
Length = 171
Score = 50.4 bits (115), Expect = 3e-05
Identities = 24/66 (36%), Positives = 37/66 (56%)
Frame = +1
Query: 301 PSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 480
P L ++V+KI + K + G R RF A V +GD G IG +KE+ AI+ A+ AK
Sbjct: 13 PLLEEKVVKINRITKVVKGGARFRFSALVVVGDKKGQIGFATAKAKEIVEAIKKALEKAK 72
Query: 481 LSVLPV 498
++ +
Sbjct: 73 KQLVRI 78
>UniRef50_Q8EUD0 Cluster: 30S ribosomal protein S5; n=3;
Mycoplasma|Rep: 30S ribosomal protein S5 - Mycoplasma
penetrans
Length = 234
Score = 50.4 bits (115), Expect = 3e-05
Identities = 24/71 (33%), Positives = 39/71 (54%)
Frame = +1
Query: 307 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 486
L ++++ + + K T+ G+ RF A IGD G++G G+ S EV AIR A+ AK +
Sbjct: 78 LEEKIVGVKKISKTTKGGRNMRFSALAVIGDRKGNVGFGLGKSIEVPVAIRKALKSAKNN 137
Query: 487 VLPVRRGSGVT 519
+ V+ T
Sbjct: 138 MYKVKMNKNFT 148
>UniRef50_UPI0000D9EF8A Cluster: PREDICTED: similar to 40S ribosomal
protein S2; n=1; Macaca mulatta|Rep: PREDICTED: similar
to 40S ribosomal protein S2 - Macaca mulatta
Length = 181
Score = 48.8 bits (111), Expect = 9e-05
Identities = 21/31 (67%), Positives = 25/31 (80%)
Frame = +2
Query: 164 KEDQKEWVPVTKLGRLVREGKIDKLESIYLF 256
K + KEW+PVTKLGRLV++ KI LE IYLF
Sbjct: 54 KAEDKEWMPVTKLGRLVKDMKIKSLEEIYLF 84
>UniRef50_Q8RIH3 Cluster: 30S ribosomal protein S5; n=3;
Fusobacterium nucleatum|Rep: 30S ribosomal protein S5 -
Fusobacterium nucleatum subsp. nucleatum
Length = 164
Score = 48.8 bits (111), Expect = 9e-05
Identities = 24/62 (38%), Positives = 36/62 (58%)
Frame = +1
Query: 313 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 492
+++LKI V K T+ G+ F A+GD G IGLG+ + V AIR AI AK +++
Sbjct: 11 EKLLKISRVSKTTKGGRTISFSVLAAVGDGEGKIGLGLGKANGVPDAIRKAIAAAKKNIV 70
Query: 493 PV 498
+
Sbjct: 71 KI 72
>UniRef50_UPI0000DC004A Cluster: UPI0000DC004A related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC004A UniRef100 entry -
Rattus norvegicus
Length = 173
Score = 48.4 bits (110), Expect = 1e-04
Identities = 32/71 (45%), Positives = 38/71 (53%)
Frame = +1
Query: 262 PIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKE 441
P +II+FFLG L DEVL+ M Q QRTR K F + + L V CSKE
Sbjct: 46 PFSSSDIIEFFLGEHLKDEVLRTMLAQ-----NQRTRIKVFFFLTIRSPMTTL-VNCSKE 99
Query: 442 VATAIRGAIIL 474
V TA + AI L
Sbjct: 100 VGTAAQRAITL 110
Score = 35.9 bits (79), Expect = 0.69
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = +3
Query: 489 FTSSKRFWGNKIGKPHTVPCKVT 557
F++ + GNKIG PHT+PC VT
Sbjct: 115 FSTQTGYKGNKIGNPHTIPCDVT 137
>UniRef50_Q9X1J2 Cluster: 30S ribosomal protein S5; n=6;
Bacteria|Rep: 30S ribosomal protein S5 - Thermotoga
maritima
Length = 178
Score = 48.4 bits (110), Expect = 1e-04
Identities = 21/62 (33%), Positives = 38/62 (61%)
Frame = +1
Query: 313 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 492
+++++I K T+ G+ F+ +G+ NG +GLG+ ++EV AIR AI AK +++
Sbjct: 17 EKIIEIRRTSKVTKGGKNLSFRVVAIVGNKNGKVGLGIGKAREVPEAIRKAISAAKRNIV 76
Query: 493 PV 498
V
Sbjct: 77 EV 78
>UniRef50_Q6F1X7 Cluster: 30S ribosomal protein S5; n=32;
Bacteria|Rep: 30S ribosomal protein S5 - Mesoplasma
florum (Acholeplasma florum)
Length = 206
Score = 48.4 bits (110), Expect = 1e-04
Identities = 28/76 (36%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Frame = +1
Query: 292 FLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAII 471
F ++V+ I V K T+ G+ RF A V +GD G +GLG + EV AI+ A+
Sbjct: 38 FQKDDFEEKVVTIRRVTKVTKGGRHFRFAAVVVVGDKKGQVGLGTGKANEVPEAIKKAVK 97
Query: 472 LAKLSVLPV-RRGSGV 516
AK +++ V RG+ V
Sbjct: 98 EAKKNLIRVPLRGTTV 113
>UniRef50_Q9RSL1 Cluster: 30S ribosomal protein S5; n=2;
Deinococcus|Rep: 30S ribosomal protein S5 - Deinococcus
radiodurans
Length = 196
Score = 48.0 bits (109), Expect = 2e-04
Identities = 24/68 (35%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
Frame = +1
Query: 313 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 492
+++L + K + G+R RF A V +GD NG +G+G+ +KEV AI A +A+ +++
Sbjct: 19 EKMLFVNRTSKTYQGGRRFRFAALVILGDRNGRVGMGIGKAKEVPVAIEKAKAVARKNMI 78
Query: 493 --PVRRGS 510
PV G+
Sbjct: 79 TVPVENGT 86
>UniRef50_P93014 Cluster: 30S ribosomal protein S5, chloroplast
precursor; n=12; cellular organisms|Rep: 30S ribosomal
protein S5, chloroplast precursor - Arabidopsis thaliana
(Mouse-ear cress)
Length = 303
Score = 47.2 bits (107), Expect = 3e-04
Identities = 19/62 (30%), Positives = 40/62 (64%)
Frame = +1
Query: 313 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 492
+ V+++ V K + G++ +F+A V +GD G++G+G +KEV A++ + I A+ +++
Sbjct: 149 ERVVQVRRVTKVVKGGKQLKFRAIVVVGDKQGNVGVGCAKAKEVVAAVQKSAIDARRNIV 208
Query: 493 PV 498
V
Sbjct: 209 QV 210
>UniRef50_P59122 Cluster: 30S ribosomal protein S5; n=40;
Bacteria|Rep: 30S ribosomal protein S5 - Bifidobacterium
longum
Length = 233
Score = 46.0 bits (104), Expect = 6e-04
Identities = 27/72 (37%), Positives = 36/72 (50%)
Frame = +1
Query: 298 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 477
G L D V+ I V K + G+ F A V +GD NG +G+G S+EV AI + A
Sbjct: 42 GDELLDRVVTINRVSKTHKGGRTFSFAALVVVGDGNGTVGVGYGKSREVPAAIAKGQLDA 101
Query: 478 KLSVLPVRRGSG 513
K + V R G
Sbjct: 102 KKHMFSVPRVRG 113
>UniRef50_A0T0Y9 Cluster: Chloroplast 30S ribosomal protein S5; n=3;
cellular organisms|Rep: Chloroplast 30S ribosomal
protein S5 - Thalassiosira pseudonana (Marine diatom)
Length = 179
Score = 46.0 bits (104), Expect = 6e-04
Identities = 20/51 (39%), Positives = 33/51 (64%)
Frame = +1
Query: 313 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 465
+ ++KI V K T+ G++ F+A V IGD NG +G+GV +++V A + A
Sbjct: 28 ERLIKISRVTKVTKGGKKLSFRAVVVIGDENGKVGVGVGKAEDVVNAFKKA 78
>UniRef50_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr10 scaffold_138, whole genome shotgun
sequence - Vitis vinifera (Grape)
Length = 340
Score = 45.6 bits (103), Expect = 9e-04
Identities = 19/62 (30%), Positives = 38/62 (61%)
Frame = +1
Query: 313 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 492
+ V+++ V K + G++ F+A V +GD G +G+GV +KEV A++ + A+ +++
Sbjct: 186 ERVVQVRRVTKVVKGGKQLHFRAVVVVGDKQGQVGVGVGKAKEVIAAVQKSATNARRNII 245
Query: 493 PV 498
V
Sbjct: 246 TV 247
>UniRef50_Q5NQ48 Cluster: 30S ribosomal protein S5; n=155; cellular
organisms|Rep: 30S ribosomal protein S5 - Zymomonas
mobilis
Length = 233
Score = 45.2 bits (102), Expect = 0.001
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Frame = +1
Query: 298 GPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 477
G L ++++ I V K + G+R F A V +GD G +G G ++EV AI A A
Sbjct: 56 GEELIEKLVHINRVSKTVKGGKRFGFAALVVVGDGKGRVGFGHGKAREVPEAISKATAAA 115
Query: 478 KLSVL--PVRRG 507
K +++ P+R G
Sbjct: 116 KKTMIRVPLREG 127
>UniRef50_Q92QF3 Cluster: 30S ribosomal protein S5; n=203; cellular
organisms|Rep: 30S ribosomal protein S5 - Rhizobium
meliloti (Sinorhizobium meliloti)
Length = 189
Score = 44.4 bits (100), Expect = 0.002
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Frame = +1
Query: 313 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK--LS 486
D+++ I V K + G+R F A V +GD G +G G ++EV AIR A AK L
Sbjct: 24 DKLVAINRVAKVVKGGRRFGFAALVVVGDQKGRVGFGHGKAREVPEAIRKATEAAKRDLI 83
Query: 487 VLPVRRG 507
+P+R G
Sbjct: 84 FVPLRGG 90
>UniRef50_Q9XD19 Cluster: 30S ribosomal protein S5; n=17;
Bacteria|Rep: 30S ribosomal protein S5 - Leptospira
interrogans
Length = 187
Score = 43.6 bits (98), Expect = 0.003
Identities = 22/63 (34%), Positives = 36/63 (57%)
Frame = +1
Query: 310 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSV 489
+++V+KI V K + G+R F A +GD G +G+G + EV AIR +I AK +
Sbjct: 31 SEKVVKIDRVAKVVKGGRRFSFNALSVVGDQRGKVGIGFGKANEVPDAIRKSIESAKKHL 90
Query: 490 LPV 498
+ +
Sbjct: 91 VKI 93
>UniRef50_Q7NEG9 Cluster: 30S ribosomal protein S5; n=34; cellular
organisms|Rep: 30S ribosomal protein S5 - Gloeobacter
violaceus
Length = 223
Score = 43.6 bits (98), Expect = 0.003
Identities = 18/62 (29%), Positives = 38/62 (61%)
Frame = +1
Query: 313 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 492
+ V++I V K + G++ F+A + +GD NG +G+GV + +V A++ + A+ +++
Sbjct: 68 ERVVQIRRVTKVVKGGKKLSFRAVIVVGDGNGRVGVGVGKANDVIGAVKKGVSDARKALI 127
Query: 493 PV 498
V
Sbjct: 128 RV 129
>UniRef50_O67563 Cluster: 30S ribosomal protein S5; n=5;
Bacteria|Rep: 30S ribosomal protein S5 - Aquifex
aeolicus
Length = 208
Score = 43.2 bits (97), Expect = 0.005
Identities = 22/64 (34%), Positives = 33/64 (51%)
Frame = +1
Query: 307 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 486
L + ++ + T+ G+R F V +GD GH+G G +KEV AI I AK +
Sbjct: 28 LEERLIYANRTARVTKGGRRFSFSTLVVVGDRKGHVGFGHGKAKEVTLAIAKGIEKAKKN 87
Query: 487 VLPV 498
V+ V
Sbjct: 88 VIRV 91
>UniRef50_P66575 Cluster: 30S ribosomal protein S5; n=128;
Bacteria|Rep: 30S ribosomal protein S5 - Mycobacterium
bovis
Length = 220
Score = 42.7 bits (96), Expect = 0.006
Identities = 23/62 (37%), Positives = 33/62 (53%)
Frame = +1
Query: 313 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 492
+ V+ I V K + G+R F A V +GD NG +G+G +KEV AI + A+ S
Sbjct: 44 ERVVAINRVSKVVKGGRRFSFTALVIVGDGNGMVGVGYGKAKEVPAAIAKGVEEARKSFF 103
Query: 493 PV 498
V
Sbjct: 104 RV 105
>UniRef50_P73304 Cluster: 30S ribosomal protein S5; n=30; cellular
organisms|Rep: 30S ribosomal protein S5 - Synechocystis
sp. (strain PCC 6803)
Length = 173
Score = 41.9 bits (94), Expect = 0.011
Identities = 20/71 (28%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Frame = +1
Query: 313 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK--LS 486
+ V++I V K + G++ F+A V +G+ G +G+GV + +V A+R + K L
Sbjct: 19 ERVIQIRRVSKVVKGGKKLSFRAIVVVGNETGQVGVGVGKAGDVIGAVRKGVADGKKQLI 78
Query: 487 VLPVRRGSGVT 519
+P+ + + +T
Sbjct: 79 EVPLTKSNSIT 89
>UniRef50_Q6AP53 Cluster: 30S ribosomal protein S5; n=8;
Bacteria|Rep: 30S ribosomal protein S5 - Desulfotalea
psychrophila
Length = 171
Score = 41.1 bits (92), Expect = 0.018
Identities = 20/58 (34%), Positives = 33/58 (56%)
Frame = +1
Query: 307 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAK 480
L ++++ I V K + G+R F A V +GD NG +G G+ + +V AIR + A+
Sbjct: 16 LIEKIVFINRVAKVVKGGRRFSFSAIVVVGDGNGKVGYGLGKANQVPEAIRKGVERAR 73
>UniRef50_UPI0000502977 Cluster: UPI0000502977 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000502977 UniRef100 entry -
Rattus norvegicus
Length = 140
Score = 39.5 bits (88), Expect = 0.056
Identities = 17/21 (80%), Positives = 17/21 (80%)
Frame = +3
Query: 513 GNKIGKPHTVPCKVTGKCGSV 575
GNKIGK H V CKVTG CGSV
Sbjct: 7 GNKIGKTHIVLCKVTGCCGSV 27
>UniRef50_O15578 Cluster: Ribosomal protein S2; n=1; Entamoeba
histolytica|Rep: Ribosomal protein S2 - Entamoeba
histolytica
Length = 88
Score = 38.7 bits (86), Expect = 0.098
Identities = 14/25 (56%), Positives = 20/25 (80%)
Frame = +2
Query: 182 WVPVTKLGRLVREGKIDKLESIYLF 256
W PVTKLGRLV++GK+ ++ I+ F
Sbjct: 35 WTPVTKLGRLVKDGKVKSIDQIFEF 59
>UniRef50_UPI000023F324 Cluster: hypothetical protein FG00649.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG00649.1 - Gibberella zeae PH-1
Length = 504
Score = 37.5 bits (83), Expect = 0.23
Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Frame = +1
Query: 337 VQKQTRAGQRTRFKAFVAI-GDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR 504
V QTR G + R + VAI G+ NG +GLG+ S E A A +LA ++ PVRR
Sbjct: 350 VSNQTRLG-KVRSTSVVAIAGNGNGRLGLGMAKSTEPGVAEETAQMLAIRNMKPVRR 405
>UniRef50_A7CZB7 Cluster: Ribosomal protein S5; n=1; Opitutaceae
bacterium TAV2|Rep: Ribosomal protein S5 - Opitutaceae
bacterium TAV2
Length = 231
Score = 37.5 bits (83), Expect = 0.23
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +1
Query: 307 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 459
L ++V+ I K + G+R F A +GD NG +G+G + EV AI+
Sbjct: 71 LVEKVVFINRCAKVVKGGRRFSFSALAVVGDKNGKVGIGYGKANEVPDAIK 121
>UniRef50_A4R1A2 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 414
Score = 37.5 bits (83), Expect = 0.23
Identities = 21/66 (31%), Positives = 35/66 (53%)
Frame = +1
Query: 307 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 486
L ++L V QTR G+ + +G+ NG IGLG S + A+ A ++A +
Sbjct: 250 LRHKILVQRFVTNQTRLGKVQSWHIMTIVGNGNGRIGLGEAKSVDGQIAMHKARLMAIKN 309
Query: 487 VLPVRR 504
++P+RR
Sbjct: 310 MVPIRR 315
>UniRef50_Q5L704 Cluster: 30S ribosomal protein S5; n=7;
Chlamydiaceae|Rep: 30S ribosomal protein S5 -
Chlamydophila abortus
Length = 165
Score = 37.5 bits (83), Expect = 0.23
Identities = 18/69 (26%), Positives = 34/69 (49%)
Frame = +1
Query: 307 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 486
L ++VL + K + G++ F A + +GD G +G G + E+ AIR A+ +
Sbjct: 13 LEEKVLVVNRCSKVVKGGRKFSFSALILVGDGKGRLGYGFAKANELTDAIRKGGEAARKN 72
Query: 487 VLPVRRGSG 513
++ + G
Sbjct: 73 LITIESLEG 81
>UniRef50_Q4EF76 Cluster: Putative uncharacterized protein; n=1;
Listeria monocytogenes str. 4b H7858|Rep: Putative
uncharacterized protein - Listeria monocytogenes str. 4b
H7858
Length = 77
Score = 37.1 bits (82), Expect = 0.30
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = -3
Query: 468 NSASNGSGDFLAALHTQTNMTVVVANGNKCLET 370
NS ++ +FL T+TNMT+ V+N NKC ET
Sbjct: 25 NSFTDSIWNFLRFTSTETNMTIFVSNNNKCCET 57
>UniRef50_Q82X75 Cluster: 30S ribosomal protein S5; n=11;
Bacteria|Rep: 30S ribosomal protein S5 - Nitrosomonas
europaea
Length = 177
Score = 37.1 bits (82), Expect = 0.30
Identities = 19/69 (27%), Positives = 37/69 (53%)
Frame = +1
Query: 307 LNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLS 486
L ++++ + V K + G+ F A +GD G +G+G S+EV A++ A+ A+
Sbjct: 21 LKEKMVSVNRVTKVVKGGRILGFAALTVVGDGKGSVGMGKGKSREVPLAVQKAMDEARQR 80
Query: 487 VLPVRRGSG 513
++ V +G
Sbjct: 81 MVRVNLING 89
>UniRef50_Q6KI38 Cluster: 30S ribosomal protein S5; n=9;
Firmicutes|Rep: 30S ribosomal protein S5 - Mycoplasma
mobile
Length = 243
Score = 36.7 bits (81), Expect = 0.39
Identities = 19/62 (30%), Positives = 34/62 (54%)
Frame = +1
Query: 313 DEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVL 492
++++ I V + G+R F A V +GD G +G G + EV AI+ A+ A+ +++
Sbjct: 91 EKIVNIARVTNVVKGGRRFSFAAVVVVGDKKGRVGYGHGKALEVPDAIKKAVKDAQNNLI 150
Query: 493 PV 498
V
Sbjct: 151 RV 152
>UniRef50_A6PPX8 Cluster: Ribosomal protein S5; n=4; Bacteria|Rep:
Ribosomal protein S5 - Victivallis vadensis ATCC BAA-548
Length = 181
Score = 35.9 bits (79), Expect = 0.69
Identities = 17/50 (34%), Positives = 26/50 (52%)
Frame = +1
Query: 310 NDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIR 459
++ V+ I K + G+ F A V +GD G +G G + EV+ AIR
Sbjct: 16 DESVISINRSAKVVKGGKNFSFGALVVVGDRKGRVGYGYGKANEVSDAIR 65
>UniRef50_Q5FFR5 Cluster: 30S ribosomal protein S5; n=5; canis
group|Rep: 30S ribosomal protein S5 - Ehrlichia
ruminantium (strain Gardel)
Length = 174
Score = 35.9 bits (79), Expect = 0.69
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = +1
Query: 319 VLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPV 498
++ + V K + G+R F V IGD G +G G+ EV+ A A+ A+ +++ V
Sbjct: 20 IVSVRRVAKVVKGGRRFSFSVLVVIGDEKGKVGCGIGKHLEVSEAKVKAVNAARKNMIRV 79
>UniRef50_Q8X048 Cluster: Related to ribosomal protein S5; n=1;
Neurospora crassa|Rep: Related to ribosomal protein S5 -
Neurospora crassa
Length = 477
Score = 35.5 bits (78), Expect = 0.91
Identities = 19/56 (33%), Positives = 30/56 (53%)
Frame = +1
Query: 337 VQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKLSVLPVRR 504
V QTR G+ V G+ +G +GLG+ S E + A+ A +LA ++ P+ R
Sbjct: 323 VVNQTRLGKIASDSVMVIAGNGDGWLGLGMAKSVEASIAVEKATLLAIQNMQPIPR 378
>UniRef50_Q2GVX5 Cluster: Putative uncharacterized protein; n=1;
Chaetomium globosum|Rep: Putative uncharacterized
protein - Chaetomium globosum (Soil fungus)
Length = 407
Score = 35.1 bits (77), Expect = 1.2
Identities = 21/67 (31%), Positives = 35/67 (52%)
Frame = +1
Query: 304 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 483
+L+ + L V QTR G+ + +G+ NG +G+G S E + A A +LA
Sbjct: 242 NLHSKQLVQRRVANQTRLGKVQKASIMYVVGNGNGWLGIGEAKSTEPSIAGLKARLLAIR 301
Query: 484 SVLPVRR 504
++ P+RR
Sbjct: 302 NMRPIRR 308
>UniRef50_Q25815 Cluster: Rps5 protein; n=1; Plasmodium
falciparum|Rep: Rps5 protein - Plasmodium falciparum
Length = 239
Score = 34.7 bits (76), Expect = 1.6
Identities = 21/66 (31%), Positives = 37/66 (56%)
Frame = +1
Query: 295 LGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIIL 474
L ++ +++++I + + G+ R+K + +G+ G IGLGV SK + I AII
Sbjct: 94 LNNNIIEKIIEIKKISYTIKKGRIRRYKIVLVLGNKQGWIGLGV--SKNI--NINKAIIS 149
Query: 475 AKLSVL 492
AK+ L
Sbjct: 150 AKIKAL 155
>UniRef50_P33759 Cluster: 37S ribosomal protein S5, mitochondrial
precursor; n=6; Saccharomycetales|Rep: 37S ribosomal
protein S5, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 307
Score = 34.7 bits (76), Expect = 1.6
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Frame = +1
Query: 292 FLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGV-KCSKEVATAI 456
++ L + L + V QT G+ F A V +GD NG +GLG K +E++ AI
Sbjct: 139 YITRKLTMKPLVMKRVSNQTGKGKIASFYALVVVGDKNGMVGLGEGKSREEMSKAI 194
>UniRef50_UPI000056598D Cluster: UPI000056598D related cluster; n=1;
Mus musculus|Rep: UPI000056598D UniRef100 entry - Mus
musculus
Length = 239
Score = 34.3 bits (75), Expect = 2.1
Identities = 32/100 (32%), Positives = 44/100 (44%), Gaps = 1/100 (1%)
Frame = +1
Query: 223 KNRQTREHLLVSLPIKEFEIIDFFLGPSLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDN 402
K + E L P K I F G SL D+++ + + + QRT+
Sbjct: 48 KIKSQEEVCLFCCPSKSLFTITDFPGESLKDDLMMASGLGSRLLSSQRTK---------- 97
Query: 403 NGHIGLGVKCSKEVATAIRGAIILAKL-SVLPVRRGSGVT 519
GH GL CS EVATAI+ I + L S P+ R +T
Sbjct: 98 -GHSGLSSMCSGEVATAIQVLGITSYLGSPWPLCREGNMT 136
>UniRef50_A2RAI1 Cluster: Remark: literature about the mitochondrial
ribosome structure: Pubmed 11279123. precursor; n=9;
Eurotiomycetidae|Rep: Remark: literature about the
mitochondrial ribosome structure: Pubmed 11279123.
precursor - Aspergillus niger
Length = 444
Score = 34.3 bits (75), Expect = 2.1
Identities = 22/67 (32%), Positives = 32/67 (47%)
Frame = +1
Query: 304 SLNDEVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILAKL 483
SL + L I V QTR G+ G+ NG +G+G+ S E+ A + A A
Sbjct: 254 SLYIKDLVIRRVSNQTRLGKVPSMSVVTVAGNQNGLMGIGIAKSDEIIDACQQARARAVK 313
Query: 484 SVLPVRR 504
++ PV R
Sbjct: 314 NMQPVPR 320
>UniRef50_A7RP03 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 270
Score = 33.1 bits (72), Expect = 4.9
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +1
Query: 319 VLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGA 465
V+++ V T G++ +A V +G+ NG G GV + +AIR A
Sbjct: 156 VVELRRVSNVTSGGKKRSLRALVVVGNRNGAAGFGVGKGRTPISAIRKA 204
>UniRef50_Q86AL0 Cluster: Similar to Dictyostelium discoideum (Slime
mold). Homeobox-containing protein; n=2; Dictyostelium
discoideum|Rep: Similar to Dictyostelium discoideum
(Slime mold). Homeobox-containing protein -
Dictyostelium discoideum (Slime mold)
Length = 766
Score = 32.7 bits (71), Expect = 6.4
Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 5/93 (5%)
Frame = -3
Query: 570 NHTCR*PCKGRCVAFRSCYPRTSSNW*NRQLSKDNSASNGSGDFLAALHTQTNMTV-VVA 394
NH CR +G + F + + N N+++ SA+ +FL T T + +++
Sbjct: 647 NHWCR--FRGGILKFPK--DKQTPNTYNKEIGSLFSANGSIKNFLMWSSTTTQVIEEILS 702
Query: 393 NGNK---CLETCALSGTCLF-LYRHDL*NLIIQ 307
+GNK C ET A+ TC F Y DL LI Q
Sbjct: 703 SGNKTITCFETSAIDNTCNFDKYLLDLNRLINQ 735
>UniRef50_Q9MTD9 Cluster: Ribosomal protein S5; n=1; Toxoplasma
gondii|Rep: Ribosomal protein S5 - Toxoplasma gondii
Length = 268
Score = 32.3 bits (70), Expect = 8.5
Identities = 17/54 (31%), Positives = 27/54 (50%)
Frame = +1
Query: 316 EVLKIMPVQKQTRAGQRTRFKAFVAIGDNNGHIGLGVKCSKEVATAIRGAIILA 477
++++I + K + G+ RFK + IG N IG+GV + AI A A
Sbjct: 134 KIIEIKKISKTKQKGRIRRFKVLLLIGAKNAWIGIGVSKDFYLQEAINKARFFA 187
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 563,506,640
Number of Sequences: 1657284
Number of extensions: 11085269
Number of successful extensions: 31682
Number of sequences better than 10.0: 79
Number of HSP's better than 10.0 without gapping: 30564
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31659
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 39987623712
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -