Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20234
         (575 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    23   1.9  
AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory recept...    23   2.5  
AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory recept...    23   2.5  
AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory recept...    23   2.5  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   5.7  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    21   7.5  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   7.5  
DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory pro...    21   9.9  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    21   9.9  

>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = -2

Query: 274 EGSFTHFWASFSNFSMVRL 218
           EG F   W  F N S+ RL
Sbjct: 392 EGDFIKLWDMFQNESLTRL 410


>AM292341-1|CAL23153.2|  393|Tribolium castaneum gustatory receptor
           candidate 20 protein.
          Length = 393

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 6/19 (31%), Positives = 10/19 (52%)
 Frame = -2

Query: 259 HFWASFSNFSMVRLSIPPH 203
           +FW   + F  +   +PPH
Sbjct: 110 YFWKMLTGFGKIEQVLPPH 128


>AM292334-1|CAL23146.2|  390|Tribolium castaneum gustatory receptor
           candidate 13 protein.
          Length = 390

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +2

Query: 290 LDKLKAERERGITIDIALWKFETSKYYVTII 382
           L KLK   + G  + +A  KF   K+YV I+
Sbjct: 78  LKKLKFLLKLGQLLGLAPVKFYVQKFYVVIL 108


>AM292333-1|CAL23145.2|  316|Tribolium castaneum gustatory receptor
           candidate 12 protein.
          Length = 316

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = +2

Query: 290 LDKLKAERERGITIDIALWKFETSKYYVTII 382
           L KLK   + G  + +A  KF   K+YV I+
Sbjct: 4   LKKLKFLLKLGQLLGLAPVKFYVQKFYVVIL 34


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -3

Query: 291  NTQAYLKDPLPISGPPSRTSRW 226
            +T ++ K   P   PPS T+ W
Sbjct: 1162 STSSWQKPTKPSYRPPSTTNHW 1183


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +1

Query: 397 QRFHQEHDHRNLS 435
           + FH+EHD R  S
Sbjct: 260 RHFHEEHDTRRAS 272


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -2

Query: 268 SFTHFWASFSNF 233
           S THFW S S F
Sbjct: 172 SGTHFWHSHSGF 183


>DQ855500-1|ABH88187.1|  126|Tribolium castaneum chemosensory
           protein 14 protein.
          Length = 126

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 4/11 (36%), Positives = 7/11 (63%)
 Frame = -3

Query: 210 HHICRSSDQWW 178
           HH+ ++   WW
Sbjct: 88  HHLIKNKPNWW 98


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 14/50 (28%), Positives = 22/50 (44%)
 Frame = +2

Query: 242 EGGPEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAP 391
           +GG E  K  F     ++ ++     GIT  +   K +  +  VT  DAP
Sbjct: 105 DGGGEEKKREFYIPPEVENVEDLFTSGITTGVNFMKLDEIEVKVTGNDAP 154


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,903
Number of Sequences: 336
Number of extensions: 2633
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14308417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)