Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20231
(752 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U13875-10|AAA21159.1| 332|Caenorhabditis elegans F-box synaptic... 99 2e-21
AC084156-1|AAK68491.2| 466|Caenorhabditis elegans Hypothetical ... 64 1e-10
AC084156-2|AAK68490.2| 243|Caenorhabditis elegans Hypothetical ... 64 1e-10
Z81049-5|CAE17733.2| 197|Caenorhabditis elegans Hypothetical pr... 30 1.5
U21323-7|AAA62551.1| 465|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z68749-7|CAA92962.2| 728|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z68749-6|CAC35818.1| 689|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z68749-5|CAC35817.1| 712|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z68219-9|CAA92483.2| 728|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z68219-7|CAC35827.1| 689|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z68219-6|CAC35826.1| 712|Caenorhabditis elegans Hypothetical pr... 29 3.5
U13875-13|AAA21156.2| 470|Caenorhabditis elegans Hypothetical p... 29 3.5
AY851363-1|AAW34127.1| 728|Caenorhabditis elegans fibulin-1D sp... 29 3.5
AF070477-1|AAC24035.1| 589|Caenorhabditis elegans fibulin-1D pr... 29 3.5
AF051403-2|AAC28323.1| 712|Caenorhabditis elegans fibulin-1 iso... 29 3.5
AF051403-1|AAC28324.1| 689|Caenorhabditis elegans fibulin-1 iso... 29 3.5
AF051402-1|AAC28322.1| 712|Caenorhabditis elegans fibulin-1 iso... 29 3.5
AF051401-1|AAC28321.1| 689|Caenorhabditis elegans fibulin-1 iso... 29 3.5
AB212860-1|BAD98165.1| 712|Caenorhabditis elegans fibulin-1C pr... 29 3.5
Z77133-3|CAB00868.2| 149|Caenorhabditis elegans Hypothetical pr... 28 6.2
U23169-3|AAV58882.1| 284|Caenorhabditis elegans Regulator of g ... 28 6.2
U23169-2|AAM98050.1| 290|Caenorhabditis elegans Regulator of g ... 28 6.2
U23169-1|AAL02450.1| 363|Caenorhabditis elegans Regulator of g ... 28 6.2
Z99281-31|CAI79273.1| 160|Caenorhabditis elegans Hypothetical p... 28 8.2
>U13875-10|AAA21159.1| 332|Caenorhabditis elegans F-box synaptic
protein protein 1 protein.
Length = 332
Score = 99 bits (238), Expect = 2e-21
Identities = 41/63 (65%), Positives = 51/63 (80%)
Frame = +2
Query: 503 KGGFYRGRHAWEIIWEGPLGTVAVIGVSTRDAPLQCQGYVGLLGSDELSWGWNLVDNHLL 682
K G +G HA++I W+GPLGTVAV+G++T+ A L C GYV LLGSD+ SWGWNLVDN L+
Sbjct: 193 KRGISKGVHAFDITWDGPLGTVAVVGIATKHAALHCVGYVALLGSDDQSWGWNLVDNVLM 252
Query: 683 HNG 691
HNG
Sbjct: 253 HNG 255
Score = 86.6 bits (205), Expect = 2e-17
Identities = 41/85 (48%), Positives = 57/85 (67%), Gaps = 1/85 (1%)
Frame = +3
Query: 255 CKTWYRMLSDENNEVWRYHCYRRLTEEMMKSD-LLSCLRTYREKLRAYCHAWNPYDCSRN 431
C +W LS E++++W+Y ++L E + LL+ L + ++KLRA+ AWN D SRN
Sbjct: 109 CHSWNNALSMEDSDIWQYLLGKKLPEAAVSDPFLLAELGSAKKKLRAWYFAWNTSDISRN 168
Query: 432 IYIKPNGFTLHRNPVAQSTDACRGK 506
YI+ NGFT+HR PVAQSTD RGK
Sbjct: 169 NYIRTNGFTVHRQPVAQSTDGVRGK 193
>AC084156-1|AAK68491.2| 466|Caenorhabditis elegans Hypothetical
protein Y46E12BL.4 protein.
Length = 466
Score = 64.1 bits (149), Expect = 1e-10
Identities = 28/67 (41%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Frame = +2
Query: 491 CL*RKGGFYRGRHAWEIIW-EGPLGTVAVIGVSTRDAPLQCQGYVGLLGSDELSWGWNLV 667
C+ K G+ RG H W+I W E GT AV+GV+T++APL GY L+G+ + S+GW++
Sbjct: 146 CIRGKMGYSRGFHVWQIEWPERQRGTHAVVGVATKNAPLHAAGYTALIGTTDESYGWDIT 205
Query: 668 DNHLLHN 688
H+
Sbjct: 206 RRECHHD 212
Score = 53.2 bits (122), Expect = 2e-07
Identities = 23/40 (57%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
Frame = +3
Query: 399 HAWNPYDCSRNIYIKPNG-FTLHRNPVAQSTDACRGKVDF 515
H+WNP D S NI++K FT HR+PVAQSTD RGK+ +
Sbjct: 114 HSWNPEDRSLNIFVKDEDKFTFHRHPVAQSTDCIRGKMGY 153
>AC084156-2|AAK68490.2| 243|Caenorhabditis elegans Hypothetical
protein Y46E12BL.3 protein.
Length = 243
Score = 63.7 bits (148), Expect = 1e-10
Identities = 29/59 (49%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Frame = +2
Query: 491 CL*RKGGFYRGRHAWEIIW-EGPLGTVAVIGVSTRDAPLQCQGYVGLLGSDELSWGWNL 664
C+ K G+ RG H W+I W E GT AV+GV+T++APLQ Y L+GS+ S+GWN+
Sbjct: 57 CIRGKMGYSRGFHVWQIEWPERQRGTHAVVGVATKNAPLQAAEYTTLVGSNNESYGWNI 115
Score = 41.9 bits (94), Expect = 5e-04
Identities = 19/40 (47%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = +3
Query: 399 HAWNPYDCSRNIYIKPNG-FTLHRNPVAQSTDACRGKVDF 515
H+WNP D S NI +K TL+R+PV TD RGK+ +
Sbjct: 25 HSWNPDDRSPNIIVKDQDKLTLYRHPVPNCTDCIRGKMGY 64
>Z81049-5|CAE17733.2| 197|Caenorhabditis elegans Hypothetical
protein C48D1.5 protein.
Length = 197
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/65 (27%), Positives = 37/65 (56%), Gaps = 4/65 (6%)
Frame = +1
Query: 346 LIYFRASELIEKNLEHIAMLGIRMIVRETFISNQ-MDLLYTEIL*H---RVQMLVEERWI 513
LI RA + + ++H+ G R VR+TF+ + ++++Y + + R+Q +VE+ +
Sbjct: 42 LIEMRAGHVYDPLIDHLLEDGCRYPVRQTFLEREFIEVVYGNVTGYVSGRIQTIVEDGF- 100
Query: 514 LSWSS 528
L W +
Sbjct: 101 LDWDN 105
>U21323-7|AAA62551.1| 465|Caenorhabditis elegans Hypothetical
protein C45G9.8 protein.
Length = 465
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/50 (28%), Positives = 29/50 (58%)
Frame = +3
Query: 252 GCKTWYRMLSDENNEVWRYHCYRRLTEEMMKSDLLSCLRTYREKLRAYCH 401
G ++++R +S E + R C++ +E +M + LLS ++ R+ R+ H
Sbjct: 20 GTRSYFRWVSTETSNNTRSKCHKLKSESIMTTSLLSRMQIDRDLRRSTEH 69
>Z68749-7|CAA92962.2| 728|Caenorhabditis elegans Hypothetical
protein F56H11.1c protein.
Length = 728
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 608 CQGYVGLLGSDELSWGWNLVDNHLLHNGDTQDTIHC 715
C G + + + E+ G L D H+LH GD + HC
Sbjct: 129 CNGDIEITHASEIITGRPLNDPHVLHLGDRCASSHC 164
>Z68749-6|CAC35818.1| 689|Caenorhabditis elegans Hypothetical
protein F56H11.1b protein.
Length = 689
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 608 CQGYVGLLGSDELSWGWNLVDNHLLHNGDTQDTIHC 715
C G + + + E+ G L D H+LH GD + HC
Sbjct: 129 CNGDIEITHASEIITGRPLNDPHVLHLGDRCASSHC 164
>Z68749-5|CAC35817.1| 712|Caenorhabditis elegans Hypothetical
protein F56H11.1a protein.
Length = 712
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 608 CQGYVGLLGSDELSWGWNLVDNHLLHNGDTQDTIHC 715
C G + + + E+ G L D H+LH GD + HC
Sbjct: 129 CNGDIEITHASEIITGRPLNDPHVLHLGDRCASSHC 164
>Z68219-9|CAA92483.2| 728|Caenorhabditis elegans Hypothetical
protein F56H11.1c protein.
Length = 728
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 608 CQGYVGLLGSDELSWGWNLVDNHLLHNGDTQDTIHC 715
C G + + + E+ G L D H+LH GD + HC
Sbjct: 129 CNGDIEITHASEIITGRPLNDPHVLHLGDRCASSHC 164
>Z68219-7|CAC35827.1| 689|Caenorhabditis elegans Hypothetical
protein F56H11.1b protein.
Length = 689
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 608 CQGYVGLLGSDELSWGWNLVDNHLLHNGDTQDTIHC 715
C G + + + E+ G L D H+LH GD + HC
Sbjct: 129 CNGDIEITHASEIITGRPLNDPHVLHLGDRCASSHC 164
>Z68219-6|CAC35826.1| 712|Caenorhabditis elegans Hypothetical
protein F56H11.1a protein.
Length = 712
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 608 CQGYVGLLGSDELSWGWNLVDNHLLHNGDTQDTIHC 715
C G + + + E+ G L D H+LH GD + HC
Sbjct: 129 CNGDIEITHASEIITGRPLNDPHVLHLGDRCASSHC 164
>U13875-13|AAA21156.2| 470|Caenorhabditis elegans Hypothetical
protein C26E6.2 protein.
Length = 470
Score = 29.1 bits (62), Expect = 3.5
Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Frame = -3
Query: 327 LIFYNNDISTLH--YSHH*AFYTKSYNQRTVSNIS 229
L FY D STLH Y H +SY QR +S S
Sbjct: 212 LAFYEQDFSTLHPNYCHPVKSINRSYMQRKLSRAS 246
>AY851363-1|AAW34127.1| 728|Caenorhabditis elegans fibulin-1D
splice variant protein.
Length = 728
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 608 CQGYVGLLGSDELSWGWNLVDNHLLHNGDTQDTIHC 715
C G + + + E+ G L D H+LH GD + HC
Sbjct: 129 CNGDIEITHASEIITGRPLNDPHVLHLGDRCASSHC 164
>AF070477-1|AAC24035.1| 589|Caenorhabditis elegans fibulin-1D
precursor protein.
Length = 589
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 608 CQGYVGLLGSDELSWGWNLVDNHLLHNGDTQDTIHC 715
C G + + + E+ G L D H+LH GD + HC
Sbjct: 28 CNGDIEITHASEIITGRPLNDPHVLHLGDRCASSHC 63
>AF051403-2|AAC28323.1| 712|Caenorhabditis elegans fibulin-1
isoform C precursor protein.
Length = 712
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 608 CQGYVGLLGSDELSWGWNLVDNHLLHNGDTQDTIHC 715
C G + + + E+ G L D H+LH GD + HC
Sbjct: 129 CNGDIEITHASEIITGRPLNDPHVLHLGDRCASSHC 164
>AF051403-1|AAC28324.1| 689|Caenorhabditis elegans fibulin-1
isoform D precursor protein.
Length = 689
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 608 CQGYVGLLGSDELSWGWNLVDNHLLHNGDTQDTIHC 715
C G + + + E+ G L D H+LH GD + HC
Sbjct: 129 CNGDIEITHASEIITGRPLNDPHVLHLGDRCASSHC 164
>AF051402-1|AAC28322.1| 712|Caenorhabditis elegans fibulin-1
isoform C precursor protein.
Length = 712
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 608 CQGYVGLLGSDELSWGWNLVDNHLLHNGDTQDTIHC 715
C G + + + E+ G L D H+LH GD + HC
Sbjct: 129 CNGDIEITHASEIITGRPLNDPHVLHLGDRCASSHC 164
>AF051401-1|AAC28321.1| 689|Caenorhabditis elegans fibulin-1
isoform D precursor protein.
Length = 689
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 608 CQGYVGLLGSDELSWGWNLVDNHLLHNGDTQDTIHC 715
C G + + + E+ G L D H+LH GD + HC
Sbjct: 129 CNGDIEITHASEIITGRPLNDPHVLHLGDRCASSHC 164
>AB212860-1|BAD98165.1| 712|Caenorhabditis elegans fibulin-1C
protein.
Length = 712
Score = 29.1 bits (62), Expect = 3.5
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +2
Query: 608 CQGYVGLLGSDELSWGWNLVDNHLLHNGDTQDTIHC 715
C G + + + E+ G L D H+LH GD + HC
Sbjct: 129 CNGDIEITHASEIITGRPLNDPHVLHLGDRCASSHC 164
>Z77133-3|CAB00868.2| 149|Caenorhabditis elegans Hypothetical
protein K03A11.5 protein.
Length = 149
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/43 (30%), Positives = 26/43 (60%)
Frame = +3
Query: 411 PYDCSRNIYIKPNGFTLHRNPVAQSTDACRGKVDFIVVVMLGK 539
PYD +N+Y + + F + + +S + +G+V++ V +LGK
Sbjct: 44 PYDICKNLYPRESNFANRQAILDKSREKSQGRVEY--VELLGK 84
>U23169-3|AAV58882.1| 284|Caenorhabditis elegans Regulator of g
protein signalingprotein 3, isoform c protein.
Length = 284
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +1
Query: 412 RMIVRETFISNQMDLLYTEIL*HRVQMLVEERWILSWSSCLGNYMGR 552
R++ + F + LY E L + E+W S+ LGN++GR
Sbjct: 126 RLLENDQFPRFRRSELYLEYLEELLPRSYAEKWAQSFEGLLGNHVGR 172
>U23169-2|AAM98050.1| 290|Caenorhabditis elegans Regulator of g
protein signalingprotein 3, isoform b protein.
Length = 290
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +1
Query: 412 RMIVRETFISNQMDLLYTEIL*HRVQMLVEERWILSWSSCLGNYMGR 552
R++ + F + LY E L + E+W S+ LGN++GR
Sbjct: 132 RLLENDQFPRFRRSELYLEYLEELLPRSYAEKWAQSFEGLLGNHVGR 178
>U23169-1|AAL02450.1| 363|Caenorhabditis elegans Regulator of g
protein signalingprotein 3, isoform a protein.
Length = 363
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +1
Query: 412 RMIVRETFISNQMDLLYTEIL*HRVQMLVEERWILSWSSCLGNYMGR 552
R++ + F + LY E L + E+W S+ LGN++GR
Sbjct: 205 RLLENDQFPRFRRSELYLEYLEELLPRSYAEKWAQSFEGLLGNHVGR 251
>Z99281-31|CAI79273.1| 160|Caenorhabditis elegans Hypothetical
protein Y57G11C.51 protein.
Length = 160
Score = 27.9 bits (59), Expect = 8.2
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = -3
Query: 669 STRFQPQLSSSEPSNPTYP*HCNGASLVDTPMTATVPRGP 550
S R+ PQ S PS+ T + S TP+T+T R P
Sbjct: 115 SPRWSPQPDPSTPSSSTSSSTSSSPSSSSTPLTSTQRRSP 154
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,201,600
Number of Sequences: 27780
Number of extensions: 417983
Number of successful extensions: 1054
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 1024
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1051
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1788025660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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