Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20230
         (591 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    81   9e-18
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    23   2.6  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    23   2.6  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    23   2.6  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   5.9  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   5.9  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   7.8  

>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 80.6 bits (190), Expect = 9e-18
 Identities = 41/82 (50%), Positives = 57/82 (69%), Gaps = 4/82 (4%)
 Frame = +2

Query: 20  GVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKII-EQIRP---D 187
           G  I++ATPGRL DF+ +G  +     Y VLDEADRMLDMGF   + +++  Q  P   +
Sbjct: 285 GCHILVATPGRLKDFVNRGNVSFNSLKYFVLDEADRMLDMGFLGDVEEMLSHQSMPATGE 344

Query: 188 RQTLMWSATWPKEVKKLAEDYL 253
           RQTLM+SAT+P+EV++LA  +L
Sbjct: 345 RQTLMFSATFPEEVQQLAGKFL 366



 Score = 37.1 bits (82), Expect = 1e-04
 Identities = 26/89 (29%), Positives = 47/89 (52%)
 Frame = +1

Query: 256 DYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRK 435
           +YI I +G +  SA  ++ Q      + +K +KL  +L++      P  +T+IFVETKR 
Sbjct: 368 NYIFIAVGIVG-SACTDVEQKFFQVSKFDKRSKLVSILEKA-----PNERTLIFVETKRN 421

Query: 436 AENISRNIRRYGWPAVCMHGDKTQQKEMK 522
           A+ ++  +      +  +HGD+ Q +  K
Sbjct: 422 ADFLATFLSEQNIQSTSIHGDRYQSEREK 450



 Score = 33.5 bits (73), Expect = 0.001
 Identities = 15/28 (53%), Positives = 19/28 (67%)
 Frame = +3

Query: 507 TERDEVLYQFKEGRASILVATDVAPRGL 590
           +ER++ L  FK G   +LVAT VA RGL
Sbjct: 446 SEREKALLDFKTGHRKVLVATGVAARGL 473


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +1

Query: 412 IFVETKRKAENISRNIRRYGWPAVC 486
           IFV+++     I  N+    W AVC
Sbjct: 221 IFVKSRPSPATIISNVTVISWQAVC 245


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +1

Query: 412 IFVETKRKAENISRNIRRYGWPAVC 486
           IFV+++     I  N+    W AVC
Sbjct: 221 IFVKSRPSPATIISNVTVISWQAVC 245


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +1

Query: 412 IFVETKRKAENISRNIRRYGWPAVC 486
           IFV+++     I  N+    W AVC
Sbjct: 541 IFVKSRPSPATIISNVTVISWQAVC 565


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 7/29 (24%), Positives = 17/29 (58%)
 Frame = -3

Query: 430 SWFQQKLLFSHQVLDFVQFLAIIHLIYFL 344
           SW + K  F  +++ F++ +   + +YF+
Sbjct: 419 SWLKSKKEFKEELIKFIEEMLQRNDVYFV 447


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 7/29 (24%), Positives = 17/29 (58%)
 Frame = -3

Query: 430 SWFQQKLLFSHQVLDFVQFLAIIHLIYFL 344
           SW + K  F  +++ F++ +   + +YF+
Sbjct: 426 SWLKSKKEFKEELIKFIEEMLQRNDVYFV 454


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 7.8
 Identities = 8/27 (29%), Positives = 13/27 (48%)
 Frame = -3

Query: 439 QLFSWFQQKLLFSHQVLDFVQFLAIIH 359
           Q+F W Q++   +H V  F+      H
Sbjct: 791 QIFDWVQKEQSLAHSVGVFLTIFNAAH 817


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,570
Number of Sequences: 336
Number of extensions: 3327
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14830622
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)