Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20230
         (591 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...    86   9e-19
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         25   2.4  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    24   4.2  
AF364130-1|AAL35506.1|  417|Anopheles gambiae putative odorant r...    23   5.6  
AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein ...    23   7.4  
CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative calcium/c...    23   9.8  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score = 85.8 bits (203), Expect = 9e-19
 Identities = 39/82 (47%), Positives = 58/82 (70%), Gaps = 4/82 (4%)
 Frame = +2

Query: 20  GVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQI----RPD 187
           G  +++ATPGRL+DF+++G    +   ++VLDEADRMLDMGF P I K++       +  
Sbjct: 299 GCHVLVATPGRLLDFIDRGYVTFENVNFVVLDEADRMLDMGFLPSIEKVMGHATMPEKQQ 358

Query: 188 RQTLMWSATWPKEVKKLAEDYL 253
           RQTLM+SAT+P E+++LA  +L
Sbjct: 359 RQTLMFSATFPAEIQELAGKFL 380



 Score = 39.5 bits (88), Expect = 8e-05
 Identities = 27/91 (29%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
 Frame = +1

Query: 250 LGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETK 429
           L +YI + +G +   A  ++ Q + + ++ +K  KL    +EI     P   T++FVETK
Sbjct: 380 LHNYICVFVGIVG-GACADVEQTIHLVEKFKKRKKL----EEILNGGNPKG-TLVFVETK 433

Query: 430 RKAENISRNIRRYGWPAVCMHGDKTQ-QKEM 519
           R A+ ++  +    +P   +HGD+ Q ++EM
Sbjct: 434 RNADYLASLMSETQFPTTSIHGDRLQREREM 464



 Score = 37.5 bits (83), Expect = 3e-04
 Identities = 16/27 (59%), Positives = 19/27 (70%)
 Frame = +3

Query: 510 ERDEVLYQFKEGRASILVATDVAPRGL 590
           ER+  LY FK GR  +L+AT VA RGL
Sbjct: 461 EREMALYDFKSGRMDVLIATSVAARGL 487


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 24.6 bits (51), Expect = 2.4
 Identities = 8/25 (32%), Positives = 17/25 (68%)
 Frame = +2

Query: 53  LIDFLEKGTTNLQRCTYLVLDEADR 127
           L+ ++E+GT  +Q  + L++DE  +
Sbjct: 133 LLQYIEQGTVRVQDISLLIVDECHK 157



 Score = 23.0 bits (47), Expect = 7.4
 Identities = 10/38 (26%), Positives = 20/38 (52%)
 Frame = +3

Query: 477 SCLYAWR*NSTERDEVLYQFKEGRASILVATDVAPRGL 590
           +CL        +++EVL +F+    ++L+ T V   G+
Sbjct: 588 NCLKQTTIEHRKQEEVLKRFRMHECNLLIGTSVLEEGI 625


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 23.8 bits (49), Expect = 4.2
 Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 7/78 (8%)
 Frame = -3

Query: 427  WFQQKLLFSHQVLDFVQFLAIIHLIY---FLFHVLDKYLQ---FEECCDLRKVVMI-LY* 269
            W  Q ++F  +++   +F  II L      L   LD Y Q   F    D   ++ I ++ 
Sbjct: 1610 WRPQAIVF--EIVTNKKFDMIIMLFIGFNMLTMTLDHYKQSETFSAVLDYLNMIFICIFS 1667

Query: 268  SECNLQVILSKFLYFFGP 215
            SEC +++   ++ YF  P
Sbjct: 1668 SECLMKIFALRYHYFIEP 1685


>AF364130-1|AAL35506.1|  417|Anopheles gambiae putative odorant
           receptor Or1 protein.
          Length = 417

 Score = 23.4 bits (48), Expect = 5.6
 Identities = 9/35 (25%), Positives = 21/35 (60%)
 Frame = +2

Query: 155 IRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLEI 259
           ++K+   + P+RQ +   A W KE++K  + + ++
Sbjct: 224 VKKLGHDVPPERQLVATDAEW-KEMRKRIDHHSKV 257


>AY263175-1|AAP78790.1|  814|Anopheles gambiae TmcA-like protein
           protein.
          Length = 814

 Score = 23.0 bits (47), Expect = 7.4
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +3

Query: 108 FLMRLIVCWIWDLNHKSEK 164
           F+  +  CW WDL  K  K
Sbjct: 515 FVRYMNSCWCWDLEKKFPK 533


>CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative
           calcium/calmodulin-dependentprotein kinase, CAKI
           protein.
          Length = 872

 Score = 22.6 bits (46), Expect = 9.8
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +1

Query: 472 WPAVCMHGDKTQQKEMKFCISSRK 543
           W   C   DK+ ++++   I SRK
Sbjct: 630 WRIACQSADKSHKEQVNCSIFSRK 653


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 608,653
Number of Sequences: 2352
Number of extensions: 13239
Number of successful extensions: 66
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 65
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 56768445
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)