Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20230
(591 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 145 2e-35
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 105 2e-23
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 105 2e-23
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 105 2e-23
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 105 3e-23
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 101 3e-22
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 101 5e-22
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 100 7e-22
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 91 4e-19
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 84 8e-17
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 75 3e-14
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 75 3e-14
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 75 4e-14
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 75 4e-14
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 75 4e-14
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 74 7e-14
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 74 7e-14
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 74 7e-14
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 73 2e-13
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 73 2e-13
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 72 4e-13
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 68 6e-12
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 66 1e-11
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 66 1e-11
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 66 1e-11
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 66 1e-11
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 61 5e-10
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 61 5e-10
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 61 7e-10
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 61 7e-10
Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical pr... 60 2e-09
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 59 3e-09
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 58 6e-09
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 58 6e-09
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 54 1e-07
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 54 1e-07
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 53 1e-07
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 51 5e-07
AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical ... 51 7e-07
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 51 7e-07
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 51 7e-07
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 49 3e-06
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 48 7e-06
U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical pr... 40 0.001
U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein... 40 0.001
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 39 0.002
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 39 0.002
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 38 0.007
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 37 0.012
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 37 0.012
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 37 0.012
AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical ... 33 0.11
U13876-4|AAX88826.1| 115|Caenorhabditis elegans Initiation fact... 33 0.15
Z92785-2|CAB07200.1| 344|Caenorhabditis elegans Hypothetical pr... 33 0.20
Z81481-6|CAB63435.1| 344|Caenorhabditis elegans Hypothetical pr... 32 0.35
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 31 0.61
U23520-3|AAC46555.2| 470|Caenorhabditis elegans Hypothetical pr... 30 1.4
U23520-2|AAR25655.1| 485|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z93380-4|CAB07597.1| 339|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical pr... 27 7.5
U40946-3|AAO91681.1| 851|Caenorhabditis elegans Hypothetical pr... 27 7.5
M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-re... 27 7.5
AC024750-3|AAF60440.1| 384|Caenorhabditis elegans Hypothetical ... 27 7.5
Z81587-1|CAB04701.1| 340|Caenorhabditis elegans Hypothetical pr... 27 10.0
U29097-2|AAA68410.2| 1056|Caenorhabditis elegans Human wrn (wern... 27 10.0
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 145 bits (351), Expect = 2e-35
Identities = 64/80 (80%), Positives = 76/80 (95%)
Frame = +2
Query: 11 LERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDR 190
LERGV+IV+ATPGRL+DFL+ GTTN+++C+YLVLDEADRMLDMGFEPQI+KII QIRPDR
Sbjct: 249 LERGVDIVVATPGRLLDFLDNGTTNMKKCSYLVLDEADRMLDMGFEPQIKKIIGQIRPDR 308
Query: 191 QTLMWSATWPKEVKKLAEDY 250
QTLM+SATWPKEV+ LA D+
Sbjct: 309 QTLMFSATWPKEVRALASDF 328
Score = 102 bits (244), Expect = 2e-22
Identities = 47/80 (58%), Positives = 61/80 (76%)
Frame = +1
Query: 268 INIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENI 447
+N+GSL+L+ANHNI Q+VDI +EH K+ KL LL I +E KTIIFVETKRKA+ +
Sbjct: 335 LNVGSLELAANHNITQVVDILEEHAKQAKLMELLNHIMNQKE--CKTIIFVETKRKADEL 392
Query: 448 SRNIRRYGWPAVCMHGDKTQ 507
+R +RR GWP +C+HGDK Q
Sbjct: 393 TRAMRRDGWPTLCIHGDKNQ 412
Score = 41.5 bits (93), Expect = 4e-04
Identities = 20/41 (48%), Positives = 27/41 (65%)
Frame = +3
Query: 468 WLASCLYAWR*NSTERDEVLYQFKEGRASILVATDVAPRGL 590
W C++ + N ERD VL +FK G+ I++ATDVA RGL
Sbjct: 401 WPTLCIHGDK-NQGERDWVLQEFKAGKTPIMLATDVAARGL 440
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 105 bits (253), Expect = 2e-23
Identities = 53/85 (62%), Positives = 64/85 (75%), Gaps = 3/85 (3%)
Frame = +2
Query: 11 LERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPD- 187
L G I+IATPGRLID +E+G L C YLVLDEADRMLDMGFEPQIRKI+ Q P
Sbjct: 270 LRAGTHILIATPGRLIDIIEQGFIGLAGCRYLVLDEADRMLDMGFEPQIRKIVGQGMPPK 329
Query: 188 --RQTLMWSATWPKEVKKLAEDYLE 256
R T M+SAT+PKE++ LA+D+L+
Sbjct: 330 TARTTAMFSATFPKEIQVLAKDFLK 354
Score = 34.7 bits (76), Expect = 0.050
Identities = 27/87 (31%), Positives = 43/87 (49%)
Frame = +1
Query: 247 LLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVET 426
L +YI + +G + S + NI Q + E EK + L EI ++ ++FVET
Sbjct: 353 LKDNYIFLAVGRVG-STSENIEQRLLWVNEMEKRSNL----MEILMNEHSENLVLVFVET 407
Query: 427 KRKAENISRNIRRYGWPAVCMHGDKTQ 507
KR A ++ + R +V +HGD Q
Sbjct: 408 KRGANELAYFLNRQQIRSVSIHGDLKQ 434
Score = 29.9 bits (64), Expect = 1.4
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +3
Query: 510 ERDEVLYQFKEGRASILVATDVAPRGL 590
ER+ L F+ G+ ILVAT VA RGL
Sbjct: 436 ERERNLELFRSGQCPILVATAVAARGL 462
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 105 bits (253), Expect = 2e-23
Identities = 53/85 (62%), Positives = 64/85 (75%), Gaps = 3/85 (3%)
Frame = +2
Query: 11 LERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPD- 187
L G I+IATPGRLID +E+G L C YLVLDEADRMLDMGFEPQIRKI+ Q P
Sbjct: 254 LRAGTHILIATPGRLIDIIEQGFIGLAGCRYLVLDEADRMLDMGFEPQIRKIVGQGMPPK 313
Query: 188 --RQTLMWSATWPKEVKKLAEDYLE 256
R T M+SAT+PKE++ LA+D+L+
Sbjct: 314 TARTTAMFSATFPKEIQVLAKDFLK 338
Score = 34.7 bits (76), Expect = 0.050
Identities = 27/87 (31%), Positives = 43/87 (49%)
Frame = +1
Query: 247 LLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVET 426
L +YI + +G + S + NI Q + E EK + L EI ++ ++FVET
Sbjct: 337 LKDNYIFLAVGRVG-STSENIEQRLLWVNEMEKRSNL----MEILMNEHSENLVLVFVET 391
Query: 427 KRKAENISRNIRRYGWPAVCMHGDKTQ 507
KR A ++ + R +V +HGD Q
Sbjct: 392 KRGANELAYFLNRQQIRSVSIHGDLKQ 418
Score = 29.9 bits (64), Expect = 1.4
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +3
Query: 510 ERDEVLYQFKEGRASILVATDVAPRGL 590
ER+ L F+ G+ ILVAT VA RGL
Sbjct: 420 ERERNLELFRSGQCPILVATAVAARGL 446
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 105 bits (253), Expect = 2e-23
Identities = 53/85 (62%), Positives = 64/85 (75%), Gaps = 3/85 (3%)
Frame = +2
Query: 11 LERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPD- 187
L G I+IATPGRLID +E+G L C YLVLDEADRMLDMGFEPQIRKI+ Q P
Sbjct: 251 LRAGTHILIATPGRLIDIIEQGFIGLAGCRYLVLDEADRMLDMGFEPQIRKIVGQGMPPK 310
Query: 188 --RQTLMWSATWPKEVKKLAEDYLE 256
R T M+SAT+PKE++ LA+D+L+
Sbjct: 311 TARTTAMFSATFPKEIQVLAKDFLK 335
Score = 34.7 bits (76), Expect = 0.050
Identities = 27/87 (31%), Positives = 43/87 (49%)
Frame = +1
Query: 247 LLGDYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVET 426
L +YI + +G + S + NI Q + E EK + L EI ++ ++FVET
Sbjct: 334 LKDNYIFLAVGRVG-STSENIEQRLLWVNEMEKRSNL----MEILMNEHSENLVLVFVET 388
Query: 427 KRKAENISRNIRRYGWPAVCMHGDKTQ 507
KR A ++ + R +V +HGD Q
Sbjct: 389 KRGANELAYFLNRQQIRSVSIHGDLKQ 415
Score = 29.9 bits (64), Expect = 1.4
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +3
Query: 510 ERDEVLYQFKEGRASILVATDVAPRGL 590
ER+ L F+ G+ ILVAT VA RGL
Sbjct: 417 ERERNLELFRSGQCPILVATAVAARGL 443
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 105 bits (251), Expect = 3e-23
Identities = 49/85 (57%), Positives = 65/85 (76%), Gaps = 3/85 (3%)
Frame = +2
Query: 11 LERGVEIVIATPGRLIDFLEKGT---TNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIR 181
L+RG EIV+ TPGR+ID L + TNL+R TYLVLDEADRM D GFEPQI K++ IR
Sbjct: 424 LKRGAEIVVCTPGRMIDVLAANSGKVTNLRRVTYLVLDEADRMFDKGFEPQIMKVVNNIR 483
Query: 182 PDRQTLMWSATWPKEVKKLAEDYLE 256
PD+QT+++SAT+P+ ++ LA L+
Sbjct: 484 PDKQTVLFSATFPRHMEALARKVLD 508
Score = 38.3 bits (85), Expect = 0.004
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Frame = +1
Query: 262 IQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAE 441
++I +G + + +I Q IC EH+K K LL+ +G E G+ +I+FV+ + KA+
Sbjct: 511 VEILVGGKSVVCS-DITQNAVICAEHQKFLK---LLELLGMYYEEGS-SIVFVDKQEKAD 565
Query: 442 NISRNIRRYGWPAVC-MHG 495
+I + R G+ +V +HG
Sbjct: 566 DIVDQLMRTGYNSVAPLHG 584
Score = 30.3 bits (65), Expect = 1.1
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +3
Query: 510 ERDEVLYQFKEGRASILVATDVAPRGL 590
+RD + FK G +LVAT VA RGL
Sbjct: 590 DRDSSIADFKTGVIKVLVATSVAARGL 616
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 101 bits (243), Expect = 3e-22
Identities = 49/86 (56%), Positives = 66/86 (76%), Gaps = 4/86 (4%)
Frame = +2
Query: 11 LERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIE----QI 178
L G I+IATPGRLID +++G ++ C YLVLDEADRMLDMGFEPQIR+I+E
Sbjct: 298 LRLGCHILIATPGRLIDVMDQGLIGMEGCRYLVLDEADRMLDMGFEPQIRQIVECNRMPS 357
Query: 179 RPDRQTLMWSATWPKEVKKLAEDYLE 256
+ +R T M+SAT+PKE++ LA+D+L+
Sbjct: 358 KEERITAMFSATFPKEIQLLAQDFLK 383
Score = 47.2 bits (107), Expect = 9e-06
Identities = 29/89 (32%), Positives = 49/89 (55%)
Frame = +1
Query: 256 DYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRK 435
+Y+ + +G + S + NI+Q + +E EK + L LL G S + T++FVETKR
Sbjct: 385 NYVFLAVGRVG-STSENIMQKIVWVEEDEKRSYLMDLLDATGDS----SLTLVFVETKRG 439
Query: 436 AENISRNIRRYGWPAVCMHGDKTQQKEMK 522
A +++ + R + V +HGD Q + K
Sbjct: 440 ASDLAYYLNRQNYEVVTIHGDLKQFEREK 468
Score = 30.3 bits (65), Expect = 1.1
Identities = 16/27 (59%), Positives = 19/27 (70%)
Frame = +3
Query: 510 ERDEVLYQFKEGRASILVATDVAPRGL 590
ER++ L F+ G A ILVAT VA RGL
Sbjct: 465 EREKHLDLFRTGTAPILVATAVAARGL 491
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 101 bits (241), Expect = 5e-22
Identities = 48/77 (62%), Positives = 57/77 (74%)
Frame = +2
Query: 20 GVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTL 199
GVEIVIATPGRL D G +L TY+VLDEADRMLDMGFE IR+I+ +IRPDR
Sbjct: 212 GVEIVIATPGRLTDLSNDGVISLASVTYVVLDEADRMLDMGFEVAIRRILFEIRPDRLVA 271
Query: 200 MWSATWPKEVKKLAEDY 250
+ SATWP+ V+KL + Y
Sbjct: 272 LTSATWPEGVRKLTDKY 288
Score = 29.9 bits (64), Expect = 1.4
Identities = 19/82 (23%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Frame = +1
Query: 277 GSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRN 456
GSL L++ ++ Q + + ++ ++ + + K IIFV++K A+++S +
Sbjct: 298 GSLDLTSCKSVTQFFEFVPHDSRFLRVCEIVNFLTAAHGQNYKMIIFVKSKVMADHLSSD 357
Query: 457 IRRYGWPAVCMHGDKTQ-QKEM 519
G + +HG ++Q +EM
Sbjct: 358 FCMKGINSQGLHGGRSQSDREM 379
Score = 28.7 bits (61), Expect = 3.3
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 501 NSTERDEVLYQFKEGRASILVATDVAPRGL 590
+ ++R+ L + G ILVATD+A RG+
Sbjct: 373 SQSDREMSLNMLRSGEVQILVATDLASRGI 402
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 100 bits (240), Expect = 7e-22
Identities = 44/78 (56%), Positives = 60/78 (76%)
Frame = +2
Query: 20 GVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTL 199
G E+V+ TPGR+ID ++ G TN R T+LV DEADRM DMGFE Q++ I + +RPDRQ L
Sbjct: 389 GAEMVVCTPGRIIDLVKMGATNFLRTTFLVFDEADRMFDMGFEAQVKSISDHVRPDRQCL 448
Query: 200 MWSATWPKEVKKLAEDYL 253
M+SAT+ ++V++LA D L
Sbjct: 449 MFSATFKQKVERLARDAL 466
Score = 35.1 bits (77), Expect = 0.038
Identities = 23/83 (27%), Positives = 44/83 (53%)
Frame = +1
Query: 295 ANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENISRNIRRYGW 474
AN +I Q V + Q + KL+ L++ + + G K +IFV K +E++++ ++ +
Sbjct: 480 ANADIEQKVFVMQNQDV--KLHWLIRNLVEFASLG-KVLIFVTKKLDSEDVAKKLKMKDF 536
Query: 475 PAVCMHGDKTQQKEMKFCISSRK 543
V +HGD Q + + + RK
Sbjct: 537 DIVLLHGDMLQAERNENLLKFRK 559
Score = 31.1 bits (67), Expect = 0.61
Identities = 16/27 (59%), Positives = 22/27 (81%)
Frame = +3
Query: 510 ERDEVLYQFKEGRASILVATDVAPRGL 590
ER+E L +F++ ++ ILVATDVA RGL
Sbjct: 549 ERNENLLKFRK-KSQILVATDVAARGL 574
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 91.5 bits (217), Expect = 4e-19
Identities = 43/78 (55%), Positives = 56/78 (71%)
Frame = +2
Query: 20 GVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTL 199
G+ IV+ATPGRL D L K NL+ C YLVLDEADRMLDMGFE +I+ I + RQTL
Sbjct: 322 GIHIVVATPGRLSDMLTKKIINLEVCRYLVLDEADRMLDMGFEDEIKSIFYFFKAQRQTL 381
Query: 200 MWSATWPKEVKKLAEDYL 253
++SAT P++++ A+ L
Sbjct: 382 LFSATMPRKIQFFAKSAL 399
Score = 31.5 bits (68), Expect = 0.46
Identities = 25/82 (30%), Positives = 41/82 (50%)
Frame = +1
Query: 262 IQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAE 441
I +N+G +A+ N+LQ ++ + ENKL +L+ + Q+ K +IF E K +
Sbjct: 403 IVVNVGRAG-AASLNVLQELEFVRS---ENKLVRVLECL---QKTSPKVLIFAEKKVDVD 455
Query: 442 NISRNIRRYGWPAVCMHGDKTQ 507
NI + G +HG K Q
Sbjct: 456 NIYEYLLVKGVEVASIHGGKDQ 477
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 83.8 bits (198), Expect = 8e-17
Identities = 38/62 (61%), Positives = 48/62 (77%)
Frame = +2
Query: 2 GTSLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIR 181
G L GVE+VIATPGRL+D LE L +CTY++LDEADRMLDMGFEP ++K++E +
Sbjct: 422 GMKLRMGVEVVIATPGRLLDVLENRYLLLNQCTYVILDEADRMLDMGFEPDVQKVLEYM- 480
Query: 182 PD 187
PD
Sbjct: 481 PD 482
Score = 36.3 bits (80), Expect = 0.016
Identities = 25/82 (30%), Positives = 41/82 (50%)
Frame = +1
Query: 268 INIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRKAENI 447
++IGS + Q+V + E K KL +L+ Q Q P IIFV K+ A+ +
Sbjct: 536 VHIGSAG-KPTERVEQVVYMVPEDRKRKKLVEVLES--QFQPP---IIIFVNQKKGADML 589
Query: 448 SRNIRRYGWPAVCMHGDKTQQK 513
S+ + + G+ +HG K Q +
Sbjct: 590 SKGLTKLGFKPTVLHGGKGQDQ 611
Score = 32.7 bits (71), Expect = 0.20
Identities = 15/27 (55%), Positives = 19/27 (70%)
Frame = +3
Query: 510 ERDEVLYQFKEGRASILVATDVAPRGL 590
+R+ L KEG + ILVATDVA RG+
Sbjct: 611 QREYALQALKEGTSDILVATDVAGRGI 637
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 75.4 bits (177), Expect = 3e-14
Identities = 45/100 (45%), Positives = 58/100 (58%), Gaps = 10/100 (10%)
Frame = +2
Query: 5 TSLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD-MGFEPQIRKIIE--- 172
+ + +G I++ T GR+ F E G L +C YLVLDEADRM+D MGF P+I +II
Sbjct: 420 SQIMKGCTIIVGTIGRVKHFCEDGAIKLDKCRYLVLDEADRMIDSMGFGPEIEQIINYKN 479
Query: 173 -QIRPDRQTLMWSATWPKEV-----KKLAEDYLEITFRSI 274
RQT+M+SAT+P V K L EDY IT I
Sbjct: 480 MPKNDKRQTMMFSATFPSSVQEAARKLLREDYTMITIDKI 519
Score = 37.9 bits (84), Expect = 0.005
Identities = 39/144 (27%), Positives = 67/144 (46%), Gaps = 10/144 (6%)
Frame = +1
Query: 154 NQKNH*ANTPRQTDFDVVSYLAQRSKETC*GLLGDYIQINIGSLQLSANHNILQIVDICQ 333
N KN N RQT ++ + + L DY I I + +AN ++Q ++C
Sbjct: 476 NYKNMPKNDKRQTMMFSATFPSSVQEAARKLLREDYTMITIDKIG-AANKCVIQEFELCD 534
Query: 334 EHEKENKLNVLLQ-EIGQ-SQEPGA-----KTIIFVETKRKAENISRNIRRYGWPAVCMH 492
K +KL LL +I + E + KTI+FV ++ A+ ++ + PA+ +H
Sbjct: 535 RTSKVDKLLKLLGIDIDTYTTEKNSDVFVKKTIVFVAQQKMADTLASIMSAAQVPAITIH 594
Query: 493 GDKTQQKE---MKFCISSRKVVLV 555
G + Q++ +K S K VL+
Sbjct: 595 GAREQKERSAALKLFRSGAKPVLI 618
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 75.4 bits (177), Expect = 3e-14
Identities = 45/100 (45%), Positives = 58/100 (58%), Gaps = 10/100 (10%)
Frame = +2
Query: 5 TSLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD-MGFEPQIRKIIE--- 172
+ + +G I++ T GR+ F E G L +C YLVLDEADRM+D MGF P+I +II
Sbjct: 420 SQIMKGCTIIVGTIGRVKHFCEDGAIKLDKCRYLVLDEADRMIDSMGFGPEIEQIINYKN 479
Query: 173 -QIRPDRQTLMWSATWPKEV-----KKLAEDYLEITFRSI 274
RQT+M+SAT+P V K L EDY IT I
Sbjct: 480 MPKNDKRQTMMFSATFPSSVQEAARKLLREDYTMITIDKI 519
Score = 37.9 bits (84), Expect = 0.005
Identities = 39/144 (27%), Positives = 67/144 (46%), Gaps = 10/144 (6%)
Frame = +1
Query: 154 NQKNH*ANTPRQTDFDVVSYLAQRSKETC*GLLGDYIQINIGSLQLSANHNILQIVDICQ 333
N KN N RQT ++ + + L DY I I + +AN ++Q ++C
Sbjct: 476 NYKNMPKNDKRQTMMFSATFPSSVQEAARKLLREDYTMITIDKIG-AANKCVIQEFELCD 534
Query: 334 EHEKENKLNVLLQ-EIGQ-SQEPGA-----KTIIFVETKRKAENISRNIRRYGWPAVCMH 492
K +KL LL +I + E + KTI+FV ++ A+ ++ + PA+ +H
Sbjct: 535 RTSKVDKLLKLLGIDIDTYTTEKNSDVFVKKTIVFVAQQKMADTLASIMSAAQVPAITIH 594
Query: 493 GDKTQQKE---MKFCISSRKVVLV 555
G + Q++ +K S K VL+
Sbjct: 595 GAREQKERSAALKLFRSGAKPVLI 618
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 74.9 bits (176), Expect = 4e-14
Identities = 39/87 (44%), Positives = 59/87 (67%), Gaps = 5/87 (5%)
Frame = +2
Query: 11 LERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD-MGFEPQIRKII--EQI- 178
+E+G I++ T GR+ F E+GT L +C + VLDEADRM+D MGF I I+ E +
Sbjct: 676 IEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIDTIVNYESMP 735
Query: 179 -RPDRQTLMWSATWPKEVKKLAEDYLE 256
+ +RQTLM+SAT+P V++ A ++L+
Sbjct: 736 KKENRQTLMFSATFPDSVQEAARNHLK 762
Score = 34.3 bits (75), Expect = 0.066
Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 7/92 (7%)
Frame = +1
Query: 259 YIQINIGSLQLSANHNILQIVDICQEHEKENKL-NVLLQEIGQ------SQEPGAKTIIF 417
YI + I + +AN +LQ + C EK++KL +L +I S+ KTI+F
Sbjct: 765 YIMLAIDKIG-AANKCVLQEFEKCDRSEKKDKLLEILGIDIDSYTTEKNSEVYTKKTIVF 823
Query: 418 VETKRKAENISRNIRRYGWPAVCMHGDKTQQK 513
V + A+ ++ + PA+ +HG + Q++
Sbjct: 824 VSQRAMADTLASILSSAQVPAITIHGAREQRE 855
Score = 33.1 bits (72), Expect = 0.15
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +3
Query: 510 ERDEVLYQFKEGRASILVATDVAPRGL 590
ER E L QF+ G +L+AT VA RGL
Sbjct: 855 ERSEALRQFRNGSKPVLIATAVAERGL 881
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 74.9 bits (176), Expect = 4e-14
Identities = 39/87 (44%), Positives = 59/87 (67%), Gaps = 5/87 (5%)
Frame = +2
Query: 11 LERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD-MGFEPQIRKII--EQI- 178
+E+G I++ T GR+ F E+GT L +C + VLDEADRM+D MGF I I+ E +
Sbjct: 676 IEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIDTIVNYESMP 735
Query: 179 -RPDRQTLMWSATWPKEVKKLAEDYLE 256
+ +RQTLM+SAT+P V++ A ++L+
Sbjct: 736 KKENRQTLMFSATFPDSVQEAARNHLK 762
Score = 34.3 bits (75), Expect = 0.066
Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 7/92 (7%)
Frame = +1
Query: 259 YIQINIGSLQLSANHNILQIVDICQEHEKENKL-NVLLQEIGQ------SQEPGAKTIIF 417
YI + I + +AN +LQ + C EK++KL +L +I S+ KTI+F
Sbjct: 765 YIMLAIDKIG-AANKCVLQEFEKCDRSEKKDKLLEILGIDIDSYTTEKNSEVYTKKTIVF 823
Query: 418 VETKRKAENISRNIRRYGWPAVCMHGDKTQQK 513
V + A+ ++ + PA+ +HG + Q++
Sbjct: 824 VSQRAMADTLASILSSAQVPAITIHGAREQRE 855
Score = 33.1 bits (72), Expect = 0.15
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +3
Query: 510 ERDEVLYQFKEGRASILVATDVAPRGL 590
ER E L QF+ G +L+AT VA RGL
Sbjct: 855 ERSEALRQFRNGSKPVLIATAVAERGL 881
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 74.9 bits (176), Expect = 4e-14
Identities = 39/87 (44%), Positives = 59/87 (67%), Gaps = 5/87 (5%)
Frame = +2
Query: 11 LERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD-MGFEPQIRKII--EQI- 178
+E+G I++ T GR+ F E+GT L +C + VLDEADRM+D MGF I I+ E +
Sbjct: 676 IEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIDTIVNYESMP 735
Query: 179 -RPDRQTLMWSATWPKEVKKLAEDYLE 256
+ +RQTLM+SAT+P V++ A ++L+
Sbjct: 736 KKENRQTLMFSATFPDSVQEAARNHLK 762
Score = 34.3 bits (75), Expect = 0.066
Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 7/92 (7%)
Frame = +1
Query: 259 YIQINIGSLQLSANHNILQIVDICQEHEKENKL-NVLLQEIGQ------SQEPGAKTIIF 417
YI + I + +AN +LQ + C EK++KL +L +I S+ KTI+F
Sbjct: 765 YIMLAIDKIG-AANKCVLQEFEKCDRSEKKDKLLEILGIDIDSYTTEKNSEVYTKKTIVF 823
Query: 418 VETKRKAENISRNIRRYGWPAVCMHGDKTQQK 513
V + A+ ++ + PA+ +HG + Q++
Sbjct: 824 VSQRAMADTLASILSSAQVPAITIHGAREQRE 855
Score = 33.1 bits (72), Expect = 0.15
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +3
Query: 510 ERDEVLYQFKEGRASILVATDVAPRGL 590
ER E L QF+ G +L+AT VA RGL
Sbjct: 855 ERSEALRQFRNGSKPVLIATAVAERGL 881
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 74.1 bits (174), Expect = 7e-14
Identities = 38/86 (44%), Positives = 55/86 (63%), Gaps = 5/86 (5%)
Frame = +2
Query: 11 LERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD-MGFEPQIRKIIE----Q 175
+E+G I++ T GR+ F E+GT L +C + VLDEADRM+D MGF I I+
Sbjct: 465 IEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIETIVNYDSMP 524
Query: 176 IRPDRQTLMWSATWPKEVKKLAEDYL 253
+ +RQTLM+SAT+P V++ A +L
Sbjct: 525 RKENRQTLMFSATFPDSVQEAARAFL 550
Score = 35.5 bits (78), Expect = 0.028
Identities = 27/93 (29%), Positives = 50/93 (53%), Gaps = 7/93 (7%)
Frame = +1
Query: 256 DYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQ-EIGQ-SQEPGA-----KTII 414
+Y+ I I + +AN +LQ + C+ EK++KL LL +I + E A KT++
Sbjct: 553 NYVMIAIDKIG-AANKCVLQEFERCERSEKKDKLLELLGIDIDSYTTEKSAEVYTKKTMV 611
Query: 415 FVETKRKAENISRNIRRYGWPAVCMHGDKTQQK 513
FV + A+ ++ + PA+ +HG + Q++
Sbjct: 612 FVSQRAMADTLASILSSAQVPAITIHGAREQRE 644
Score = 33.1 bits (72), Expect = 0.15
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +3
Query: 510 ERDEVLYQFKEGRASILVATDVAPRGL 590
ER E L QF+ G +L+AT VA RGL
Sbjct: 644 ERSEALRQFRNGSKPVLIATAVAERGL 670
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 74.1 bits (174), Expect = 7e-14
Identities = 38/86 (44%), Positives = 55/86 (63%), Gaps = 5/86 (5%)
Frame = +2
Query: 11 LERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD-MGFEPQIRKIIE----Q 175
+E+G I++ T GR+ F E+GT L +C + VLDEADRM+D MGF I I+
Sbjct: 465 IEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIETIVNYDSMP 524
Query: 176 IRPDRQTLMWSATWPKEVKKLAEDYL 253
+ +RQTLM+SAT+P V++ A +L
Sbjct: 525 RKENRQTLMFSATFPDSVQEAARAFL 550
Score = 34.3 bits (75), Expect = 0.066
Identities = 27/93 (29%), Positives = 50/93 (53%), Gaps = 7/93 (7%)
Frame = +1
Query: 256 DYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQ-EIGQ-SQEPGA-----KTII 414
+Y+ I I + +AN +LQ + C+ EK++KL LL +I + E A KT++
Sbjct: 553 NYVMIAIDKIG-AANKCVLQEFERCERSEKKDKLLELLGIDIDSYTTEKSAEVYTKKTMV 611
Query: 415 FVETKRKAENISRNIRRYGWPAVCMHGDKTQQK 513
FV + A+ ++ + PA+ +HG + Q++
Sbjct: 612 FVSQRAMADILASILSSAQVPAITIHGAREQRE 644
Score = 33.1 bits (72), Expect = 0.15
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +3
Query: 510 ERDEVLYQFKEGRASILVATDVAPRGL 590
ER E L QF+ G +L+AT VA RGL
Sbjct: 644 ERSEALRQFRNGSKPVLIATAVAERGL 670
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 74.1 bits (174), Expect = 7e-14
Identities = 38/86 (44%), Positives = 55/86 (63%), Gaps = 5/86 (5%)
Frame = +2
Query: 11 LERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD-MGFEPQIRKIIE----Q 175
+E+G I++ T GR+ F E+GT L +C + VLDEADRM+D MGF I I+
Sbjct: 465 IEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIETIVNYDSMP 524
Query: 176 IRPDRQTLMWSATWPKEVKKLAEDYL 253
+ +RQTLM+SAT+P V++ A +L
Sbjct: 525 RKENRQTLMFSATFPDSVQEAARAFL 550
Score = 35.5 bits (78), Expect = 0.028
Identities = 27/93 (29%), Positives = 50/93 (53%), Gaps = 7/93 (7%)
Frame = +1
Query: 256 DYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQ-EIGQ-SQEPGA-----KTII 414
+Y+ I I + +AN +LQ + C+ EK++KL LL +I + E A KT++
Sbjct: 553 NYVMIAIDKIG-AANKCVLQEFERCERSEKKDKLLELLGIDIDSYTTEKSAEVYTKKTMV 611
Query: 415 FVETKRKAENISRNIRRYGWPAVCMHGDKTQQK 513
FV + A+ ++ + PA+ +HG + Q++
Sbjct: 612 FVSQRAMADTLASILSSAQVPAITIHGAREQRE 644
Score = 33.1 bits (72), Expect = 0.15
Identities = 15/27 (55%), Positives = 18/27 (66%)
Frame = +3
Query: 510 ERDEVLYQFKEGRASILVATDVAPRGL 590
ER E L QF+ G +L+AT VA RGL
Sbjct: 644 ERSEALRQFRNGSKPVLIATAVAERGL 670
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 72.9 bits (171), Expect = 2e-13
Identities = 30/77 (38%), Positives = 51/77 (66%)
Frame = +2
Query: 23 VEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLM 202
V +VIATPGR++D +EKG ++ C LVLDEAD++L F+ + ++I + +RQ ++
Sbjct: 162 VHLVIATPGRILDLMEKGVAKMEHCKTLVLDEADKLLSQDFQGILDRLINFLPKERQVML 221
Query: 203 WSATWPKEVKKLAEDYL 253
+SAT+P V + ++
Sbjct: 222 YSATFPNTVTSFMQKHM 238
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 72.5 bits (170), Expect = 2e-13
Identities = 38/79 (48%), Positives = 57/79 (72%), Gaps = 2/79 (2%)
Frame = +2
Query: 8 SLERGVEIVIATPGRLIDFLE--KGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIR 181
+L R I++ATPGRL+D LE KG NL+ +L++DEADR+L+M FE ++ KI++ I
Sbjct: 158 ALARRPHIIVATPGRLVDHLENTKGF-NLKALKFLIMDEADRILNMDFEVELDKILKVIP 216
Query: 182 PDRQTLMWSATWPKEVKKL 238
+R+T ++SAT K+V KL
Sbjct: 217 RERRTYLFSATMTKKVSKL 235
Score = 29.1 bits (62), Expect = 2.5
Identities = 16/60 (26%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Frame = +1
Query: 385 SQEPGAKTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQKEM----KFCISSRKVVL 552
++ G I+F T I+ +R+ G AV +HG +Q+K + KF +R++++
Sbjct: 279 NEHAGNSAIVFCATCATTMQIAVMLRQLGMQAVPLHGQMSQEKRLGSLNKFKSKAREILV 338
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 71.7 bits (168), Expect = 4e-13
Identities = 35/74 (47%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
Frame = +2
Query: 20 GVEIVIATPGRLIDFL-EKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQT 196
G+ I++ TPGRL+ + E + LVLDEADRMLDMGF Q+ II + +RQT
Sbjct: 197 GINIIVCTPGRLLQHMDENAQMSCDSLQVLVLDEADRMLDMGFSKQLNSIINNLPAERQT 256
Query: 197 LMWSATWPKEVKKL 238
L++SAT + VK L
Sbjct: 257 LLFSATQTRNVKDL 270
Score = 34.7 bits (76), Expect = 0.050
Identities = 15/30 (50%), Positives = 21/30 (70%)
Frame = +3
Query: 501 NSTERDEVLYQFKEGRASILVATDVAPRGL 590
N +R E +F E +A++L+ATDVA RGL
Sbjct: 357 NQKKRIETFTKFDESKAAVLIATDVASRGL 386
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 67.7 bits (158), Expect = 6e-12
Identities = 32/79 (40%), Positives = 55/79 (69%), Gaps = 1/79 (1%)
Frame = +2
Query: 11 LERGVEIVIATPGRLIDFLEKGTTNLQR-CTYLVLDEADRMLDMGFEPQIRKIIEQIRPD 187
L +GV I++ATPGRL+D L+ L R L++DEADR+LD+GFE ++++++ +
Sbjct: 187 LAKGVSILVATPGRLLDHLQNTDNFLVRNMKCLIIDEADRILDIGFEIEMQQVLRHLPKQ 246
Query: 188 RQTLMWSATWPKEVKKLAE 244
RQ++++SAT +V +L +
Sbjct: 247 RQSMLFSATHSPKVDELVK 265
Score = 27.9 bits (59), Expect = 5.7
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3
Query: 510 ERDEVLYQFKEGRASILVATDVAPRGL 590
+R +QF + IL+ TDVA RGL
Sbjct: 352 KRTTTFFQFCQAETGILLCTDVAARGL 378
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 66.5 bits (155), Expect = 1e-11
Identities = 31/86 (36%), Positives = 47/86 (54%)
Frame = +2
Query: 11 LERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDR 190
LE G+ +V+ TPGR+ D + + + R VLDEAD ML GF+ QI ++ + D
Sbjct: 144 LEAGIHVVVGTPGRVGDMINRNALDTSRIKMFVLDEADEMLSRGFKDQIYEVFRSMPQDV 203
Query: 191 QTLMWSATWPKEVKKLAEDYLEITFR 268
Q ++ SAT P EV + ++ R
Sbjct: 204 QVVLLSATMPSEVLDVTNRFMRNPIR 229
Score = 33.9 bits (74), Expect = 0.087
Identities = 16/50 (32%), Positives = 30/50 (60%)
Frame = +3
Query: 441 EHIKEHQEIWLASCLYAWR*NSTERDEVLYQFKEGRASILVATDVAPRGL 590
E + E+Q + SCL+ + ERD ++ +F+ G + +L+ TD+ RG+
Sbjct: 286 EKMTENQ--FTVSCLHGDM-DQAERDTIMREFRSGSSRVLITTDILARGI 332
Score = 29.5 bits (63), Expect = 1.9
Identities = 10/35 (28%), Positives = 19/35 (54%)
Frame = +1
Query: 403 KTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQ 507
+ +IF T+RK + ++ + + C+HGD Q
Sbjct: 270 QAVIFCNTRRKVDTLTEKMTENQFTVSCLHGDMDQ 304
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 66.5 bits (155), Expect = 1e-11
Identities = 31/86 (36%), Positives = 47/86 (54%)
Frame = +2
Query: 11 LERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDR 190
LE G+ +V+ TPGR+ D + + + R VLDEAD ML GF+ QI ++ + D
Sbjct: 144 LEAGIHVVVGTPGRVGDMINRNALDTSRIKMFVLDEADEMLSRGFKDQIYEVFRSMPQDV 203
Query: 191 QTLMWSATWPKEVKKLAEDYLEITFR 268
Q ++ SAT P EV + ++ R
Sbjct: 204 QVVLLSATMPSEVLDVTNRFMRNPIR 229
Score = 33.9 bits (74), Expect = 0.087
Identities = 16/50 (32%), Positives = 30/50 (60%)
Frame = +3
Query: 441 EHIKEHQEIWLASCLYAWR*NSTERDEVLYQFKEGRASILVATDVAPRGL 590
E + E+Q + SCL+ + ERD ++ +F+ G + +L+ TD+ RG+
Sbjct: 286 EKMTENQ--FTVSCLHGDM-DQAERDTIMREFRSGSSRVLITTDILARGI 332
Score = 29.5 bits (63), Expect = 1.9
Identities = 10/35 (28%), Positives = 19/35 (54%)
Frame = +1
Query: 403 KTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQ 507
+ +IF T+RK + ++ + + C+HGD Q
Sbjct: 270 QAVIFCNTRRKVDTLTEKMTENQFTVSCLHGDMDQ 304
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 66.5 bits (155), Expect = 1e-11
Identities = 30/80 (37%), Positives = 52/80 (65%)
Frame = +2
Query: 5 TSLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRP 184
+++ +I++ATPGRL+ + + L Y+V DEADR+ +MGF+ Q+ + +++I
Sbjct: 138 STIHENPDILLATPGRLLHVIVEMDLRLSYVQYVVFDEADRLFEMGFQDQLTETLKRIPE 197
Query: 185 DRQTLMWSATWPKEVKKLAE 244
RQTL++SAT PK + A+
Sbjct: 198 SRQTLLFSATLPKMLVDFAK 217
Score = 27.1 bits (57), Expect = 10.0
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +3
Query: 501 NSTERDEVLYQFKEGRASILVATDVAPRGL 590
++T R + +F E + +ILV TDVA RG+
Sbjct: 300 DATARKMNIQKFHEKQNNILVVTDVAARGV 329
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 66.5 bits (155), Expect = 1e-11
Identities = 30/80 (37%), Positives = 52/80 (65%)
Frame = +2
Query: 5 TSLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRP 184
+++ +I++ATPGRL+ + + L Y+V DEADR+ +MGF+ Q+ + +++I
Sbjct: 138 STIHENPDILLATPGRLLHVIVEMDLRLSYVQYVVFDEADRLFEMGFQDQLTETLKRIPE 197
Query: 185 DRQTLMWSATWPKEVKKLAE 244
RQTL++SAT PK + A+
Sbjct: 198 SRQTLLFSATLPKMLVDFAK 217
Score = 27.1 bits (57), Expect = 10.0
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +3
Query: 501 NSTERDEVLYQFKEGRASILVATDVAPRGL 590
++T R + +F E + +ILV TDVA RG+
Sbjct: 300 DATARKMNIQKFHEKQNNILVVTDVAARGV 329
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 61.3 bits (142), Expect = 5e-10
Identities = 28/76 (36%), Positives = 44/76 (57%)
Frame = +2
Query: 26 EIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMW 205
+IVI TPGR+ ++ G N+ + VLDEAD+++D F I II + RQ ++
Sbjct: 142 QIVIGTPGRIAQLVKLGAMNMSHVDFFVLDEADKLMDEVFRDDINIIINSLPQIRQVAVF 201
Query: 206 SATWPKEVKKLAEDYL 253
SAT+P+ + L +L
Sbjct: 202 SATYPRNLDNLLSTFL 217
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 61.3 bits (142), Expect = 5e-10
Identities = 28/76 (36%), Positives = 44/76 (57%)
Frame = +2
Query: 26 EIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMW 205
+IVI TPGR+ ++ G N+ + VLDEAD+++D F I II + RQ ++
Sbjct: 142 QIVIGTPGRIAQLVKLGAMNMSHVDFFVLDEADKLMDEVFRDDINIIINSLPQIRQVAVF 201
Query: 206 SATWPKEVKKLAEDYL 253
SAT+P+ + L +L
Sbjct: 202 SATYPRNLDNLLSTFL 217
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 60.9 bits (141), Expect = 7e-10
Identities = 28/81 (34%), Positives = 45/81 (55%)
Frame = +2
Query: 11 LERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDR 190
L+ G +V TPGR+ D + + + LVLDEAD ML+ GF+ Q+ I + P
Sbjct: 141 LDYGQHVVSGTPGRVFDMIRRRNLRTRAIKLLVLDEADEMLNKGFKEQLYDIYRYLPPGA 200
Query: 191 QTLMWSATWPKEVKKLAEDYL 253
Q ++ SAT P E+ ++ ++
Sbjct: 201 QVVLLSATLPHEILEMTSKFM 221
Score = 33.1 bits (72), Expect = 0.15
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = +3
Query: 510 ERDEVLYQFKEGRASILVATDVAPRGL 590
+RDEV+ +F+ G +L++TDV RGL
Sbjct: 303 DRDEVMKEFRAGTTRVLISTDVWARGL 329
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 60.9 bits (141), Expect = 7e-10
Identities = 28/81 (34%), Positives = 45/81 (55%)
Frame = +2
Query: 11 LERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDR 190
L+ G +V TPGR+ D + + + LVLDEAD ML+ GF+ Q+ I + P
Sbjct: 141 LDYGQHVVSGTPGRVFDMIRRRNLRTRAIKLLVLDEADEMLNKGFKEQLYDIYRYLPPGA 200
Query: 191 QTLMWSATWPKEVKKLAEDYL 253
Q ++ SAT P E+ ++ ++
Sbjct: 201 QVVLLSATLPHEILEMTSKFM 221
Score = 33.1 bits (72), Expect = 0.15
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = +3
Query: 510 ERDEVLYQFKEGRASILVATDVAPRGL 590
+RDEV+ +F+ G +L++TDV RGL
Sbjct: 303 DRDEVMKEFRAGTTRVLISTDVWARGL 329
>Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical
protein C26D10.2b protein.
Length = 268
Score = 59.7 bits (138), Expect = 2e-09
Identities = 31/97 (31%), Positives = 53/97 (54%), Gaps = 1/97 (1%)
Frame = +2
Query: 29 IVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRML-DMGFEPQIRKIIEQIRPDRQTLMW 205
IV+ TPGR++ G L + Y VLDE D+M+ D +++I++ +Q +M+
Sbjct: 164 IVVGTPGRMLALARSGKLKLDKVKYFVLDECDKMIGDADMRRDVQEIVKMTPQQKQVMMF 223
Query: 206 SATWPKEVKKLAEDYLEITFRSI*DHYNFPQITTFFK 316
SAT PKE++ + + +++ R I D + TF K
Sbjct: 224 SATLPKELRTVCKRFMQ-DVRFISDPEPTEPLFTFLK 259
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 58.8 bits (136), Expect = 3e-09
Identities = 25/77 (32%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Frame = +2
Query: 29 IVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRML-DMGFEPQIRKIIEQIRPDRQTLMW 205
IV+ TPGR++ G L + Y VLDE D+M+ D +++I++ +Q +M+
Sbjct: 164 IVVGTPGRMLALARSGKLKLDKVKYFVLDECDKMIGDADMRRDVQEIVKMTPQQKQVMMF 223
Query: 206 SATWPKEVKKLAEDYLE 256
SAT PKE++ + + +++
Sbjct: 224 SATLPKELRTVCKRFMQ 240
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 57.6 bits (133), Expect = 6e-09
Identities = 30/74 (40%), Positives = 43/74 (58%), Gaps = 4/74 (5%)
Frame = +2
Query: 29 IVIATPGRLIDFLEKGTTNL----QRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQT 196
+V+ATPGRL D +E + ++ + VLDEADRML+ + Q++ I E I RQT
Sbjct: 210 VVVATPGRLADLIESDPDTIAKVFKKIQFFVLDEADRMLEGQYNDQLKPIFESISEKRQT 269
Query: 197 LMWSATWPKEVKKL 238
L+ SAT + L
Sbjct: 270 LLLSATITNNINML 283
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 57.6 bits (133), Expect = 6e-09
Identities = 30/74 (40%), Positives = 43/74 (58%), Gaps = 4/74 (5%)
Frame = +2
Query: 29 IVIATPGRLIDFLEKGTTNL----QRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQT 196
+V+ATPGRL D +E + ++ + VLDEADRML+ + Q++ I E I RQT
Sbjct: 210 VVVATPGRLADLIESDPDTIAKVFKKIQFFVLDEADRMLEGQYNDQLKPIFESISEKRQT 269
Query: 197 LMWSATWPKEVKKL 238
L+ SAT + L
Sbjct: 270 LLLSATITNNINML 283
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 53.6 bits (123), Expect = 1e-07
Identities = 28/72 (38%), Positives = 48/72 (66%), Gaps = 2/72 (2%)
Frame = +2
Query: 23 VEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMG-FEPQIRKII-EQIRPDRQT 196
+ I++AT GRL DF+ G +L + Y+VLDEADRM+D F ++ KII +QT
Sbjct: 867 LNILVATMGRLQDFVNAGEVSLSKMKYIVLDEADRMVDSNDFGEEVSKIIGSPGERTQQT 926
Query: 197 LMWSATWPKEVK 232
+++SA++ ++++
Sbjct: 927 VLFSASFSEDLQ 938
Score = 29.1 bits (62), Expect = 2.5
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3
Query: 501 NSTERDEVLYQFKEGRASILVATDVAPRGL 590
N +RD L F+ G+ +VA++V RGL
Sbjct: 1037 NQEQRDRTLDDFRRGKYQCMVASNVCARGL 1066
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 53.6 bits (123), Expect = 1e-07
Identities = 28/72 (38%), Positives = 48/72 (66%), Gaps = 2/72 (2%)
Frame = +2
Query: 23 VEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMG-FEPQIRKII-EQIRPDRQT 196
+ I++AT GRL DF+ G +L + Y+VLDEADRM+D F ++ KII +QT
Sbjct: 867 LNILVATMGRLQDFVNAGEVSLSKMKYIVLDEADRMVDSNDFGEEVSKIIGSPGERTQQT 926
Query: 197 LMWSATWPKEVK 232
+++SA++ ++++
Sbjct: 927 VLFSASFSEDLQ 938
Score = 29.1 bits (62), Expect = 2.5
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3
Query: 501 NSTERDEVLYQFKEGRASILVATDVAPRGL 590
N +RD L F+ G+ +VA++V RGL
Sbjct: 1037 NQEQRDRTLDDFRRGKYQCMVASNVCARGL 1066
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 53.2 bits (122), Expect = 1e-07
Identities = 25/76 (32%), Positives = 47/76 (61%)
Frame = +2
Query: 29 IVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWS 208
IV+ TPGR++ G L + Y VLDE D+M+ + +R+ +++I +Q +M+S
Sbjct: 163 IVVGTPGRMLALARSGKLKLDKVKYFVLDECDKMIG---DADMRRDVQEI---KQVMMFS 216
Query: 209 ATWPKEVKKLAEDYLE 256
AT PKE++ + + +++
Sbjct: 217 ATLPKELRTVCKRFMQ 232
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 51.2 bits (117), Expect = 5e-07
Identities = 29/74 (39%), Positives = 44/74 (59%), Gaps = 4/74 (5%)
Frame = +2
Query: 17 RGVEIVIATPGRLIDFLEKGTTNLQR----CTYLVLDEADRMLDMGFEPQIRKIIEQIRP 184
+ V I++ATPGRL ++ T + R LV+DEADR ++ FE +R+I+ I
Sbjct: 130 KNVNILVATPGRLFQIIQHEKTLIARKMRTLQLLVIDEADRFNEIQFEDHMREILSCIPK 189
Query: 185 DRQTLMWSATWPKE 226
R+T ++SAT KE
Sbjct: 190 QRRTGLFSATQVKE 203
>AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical
protein C24H12.4b protein.
Length = 567
Score = 50.8 bits (116), Expect = 7e-07
Identities = 27/81 (33%), Positives = 44/81 (54%)
Frame = +2
Query: 11 LERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDR 190
LE +V+ TPG+L+ +YLV+DEAD +L G+E ++ KI ++ P
Sbjct: 143 LEDRSHVVVTTPGKLLRMCSLRPEYCTLVSYLVMDEADLLLSFGYEEEMIKIRSKLPPTY 202
Query: 191 QTLMWSATWPKEVKKLAEDYL 253
Q LM SAT ++ L + ++
Sbjct: 203 QCLMTSATLKDDMTTLKKLFM 223
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 50.8 bits (116), Expect = 7e-07
Identities = 27/81 (33%), Positives = 44/81 (54%)
Frame = +2
Query: 11 LERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDR 190
LE +V+ TPG+L+ +YLV+DEAD +L G+E ++ KI ++ P
Sbjct: 210 LEDRSHVVVTTPGKLLRMCSLRPEYCTLVSYLVMDEADLLLSFGYEEEMIKIRSKLPPTY 269
Query: 191 QTLMWSATWPKEVKKLAEDYL 253
Q LM SAT ++ L + ++
Sbjct: 270 QCLMTSATLKDDMTTLKKLFM 290
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 50.8 bits (116), Expect = 7e-07
Identities = 39/108 (36%), Positives = 55/108 (50%), Gaps = 25/108 (23%)
Frame = +2
Query: 8 SLERGVEIVIATPGRLIDFLEKGTT-NLQR-------------------CTY-----LVL 112
+L G ++V+ATPGRLID L + NL C LVL
Sbjct: 265 ALRSGPDVVVATPGRLIDHLHNSPSFNLSNIEVFFKTPNIPPKKNSRKICKIPNFQVLVL 324
Query: 113 DEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLE 256
DEADRML+ F Q+ ++I +RQTL++SAT +E+ +LA L+
Sbjct: 325 DEADRMLEEAFRDQMNELIRLCAQNRQTLLFSATMTEEIDELASMSLQ 372
Score = 29.5 bits (63), Expect = 1.9
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +3
Query: 510 ERDEVLYQFKEGRASILVATDVAPRGL 590
+R E L +FK+ +LV+TD+A RGL
Sbjct: 455 QRIESLSKFKKAEIDVLVSTDLASRGL 481
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 48.8 bits (111), Expect = 3e-06
Identities = 25/70 (35%), Positives = 36/70 (51%)
Frame = +2
Query: 59 DFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKL 238
DFL ++ R VLDEAD ML GF+ QI ++ + D Q ++ SAT P EV +
Sbjct: 119 DFLSNIPSDTSRIKMFVLDEADEMLSKGFKDQIYEVFRSMPQDVQVVLLSATMPSEVLDV 178
Query: 239 AEDYLEITFR 268
++ R
Sbjct: 179 TNRFMRDPIR 188
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 47.6 bits (108), Expect = 7e-06
Identities = 32/90 (35%), Positives = 50/90 (55%), Gaps = 8/90 (8%)
Frame = +2
Query: 11 LERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRML-DMGFEP--QIRKIIE--- 172
+ G +I+I T GR++DF K +L +LV DEADR+L DM +P + II+
Sbjct: 506 IRNGCDILIGTCGRIMDFTVKSHISLLHLRFLVFDEADRLLQDMKKDPLGHLGAIIKDAG 565
Query: 173 --QIRPDRQTLMWSATWPKEVKKLAEDYLE 256
+ RQT+M SAT+ V +A + ++
Sbjct: 566 FMESAATRQTIMTSATFNASVMTVANELMK 595
Score = 32.3 bits (70), Expect = 0.27
Identities = 25/89 (28%), Positives = 44/89 (49%)
Frame = +1
Query: 256 DYIQINIGSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEPGAKTIIFVETKRK 435
+ I+I + + +LS N L+ + EK KL +L++ + KTIIFV+ K +
Sbjct: 602 EMIKIVLANGRLSKRVN-LEFFECKGLAEKNAKLREILKQNVNGKT--LKTIIFVQKKDQ 658
Query: 436 AENISRNIRRYGWPAVCMHGDKTQQKEMK 522
+ + + G A +HGD++Q K
Sbjct: 659 CDACAAKLTSGGMLAQTLHGDRSQDMREK 687
Score = 28.3 bits (60), Expect = 4.3
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +3
Query: 471 LASCLYAWR*NSTERDEVLYQFKEGRASILVATDVAPRGL 590
LA L+ R + R++++ FK R ++LV TD+ RG+
Sbjct: 672 LAQTLHGDR-SQDMREKLINDFKSNRVNLLVTTDLLSRGI 710
>U64840-7|AAB04965.1| 340|Caenorhabditis elegans Hypothetical
protein ZC317.1 protein.
Length = 340
Score = 39.9 bits (89), Expect = 0.001
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 5/71 (7%)
Frame = +2
Query: 26 EIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD-MGFEPQIRKIIEQIRPDR---- 190
+I T G+L +E G L ++LDEAD+M+D F P I I++Q++ +
Sbjct: 125 DIAFCTIGKLKATIECGDVCLDNLKTIILDEADKMIDNCAFVPDINWILDQLKEENLENL 184
Query: 191 QTLMWSATWPK 223
Q+ +SAT+ K
Sbjct: 185 QSCFFSATYNK 195
>U53141-4|AAA96106.1| 528|Caenorhabditis elegans Mutator protein 14
protein.
Length = 528
Score = 39.9 bits (89), Expect = 0.001
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 5/71 (7%)
Frame = +2
Query: 26 EIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLD-MGFEPQIRKIIEQIRPDR---- 190
+I T G+L +E G L ++LDEAD+M+D F P I I++Q++ +
Sbjct: 225 DIAFCTIGKLKATIECGDVCLDNLKTIILDEADKMIDNCAFGPDINWILDQLKEENLENL 284
Query: 191 QTLMWSATWPK 223
Q+ +SAT+ K
Sbjct: 285 QSCFFSATYNK 295
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 39.1 bits (87), Expect = 0.002
Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 10/73 (13%)
Frame = +2
Query: 26 EIVIATPGRLIDFLEKGTTNLQRCTY-----LVLDEADRMLDMGFEPQIRKIIEQIRPDR 190
+IV+ATPGRL +++ T + LV+DE DRM++ G+ ++ I+ +I +
Sbjct: 121 DIVVATPGRLWAMMQEAETGEFLAEWKDLKCLVVDETDRMVEEGYFAELTHILNKIHEES 180
Query: 191 -----QTLMWSAT 214
QTL++SAT
Sbjct: 181 EKEKLQTLVFSAT 193
Score = 28.7 bits (61), Expect = 3.3
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = +3
Query: 510 ERDEVLYQFKEGRASILVATDVAPRGL 590
+R + L +F E + ++L+ATDVA RGL
Sbjct: 311 QRLKNLEKFSESKNAVLLATDVAARGL 337
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 39.1 bits (87), Expect = 0.002
Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 10/73 (13%)
Frame = +2
Query: 26 EIVIATPGRLIDFLEKGTTNLQRCTY-----LVLDEADRMLDMGFEPQIRKIIEQIRPDR 190
+IV+ATPGRL +++ T + LV+DE DRM++ G+ ++ I+ +I +
Sbjct: 288 DIVVATPGRLWAMMQEAETGEFLAEWKDLKCLVVDETDRMVEEGYFAELTHILNKIHEES 347
Query: 191 -----QTLMWSAT 214
QTL++SAT
Sbjct: 348 EKEKLQTLVFSAT 360
Score = 28.7 bits (61), Expect = 3.3
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = +3
Query: 510 ERDEVLYQFKEGRASILVATDVAPRGL 590
+R + L +F E + ++L+ATDVA RGL
Sbjct: 478 QRLKNLEKFSESKNAVLLATDVAARGL 504
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 37.5 bits (83), Expect = 0.007
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = +2
Query: 8 SLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRML 133
+LE G +IV+ TP R+ D + G + ++V+DE D+ L
Sbjct: 330 TLETGCDIVVGTPSRVFDLIHTGKLATKNLQFVVIDEIDQFL 371
Score = 35.1 bits (77), Expect = 0.038
Identities = 13/53 (24%), Positives = 30/53 (56%)
Frame = +1
Query: 403 KTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQKEMKFCISSRKVVLVFL 561
K I+F TK++ +++ +++ A C+HGD++ ++ +K ++ FL
Sbjct: 507 KAIVFCRTKQQCDHMEHFLQQNNLSAACLHGDRSAEERQSSLEGFKKGIIRFL 559
Score = 31.1 bits (67), Expect = 0.61
Identities = 19/50 (38%), Positives = 27/50 (54%)
Frame = +3
Query: 441 EHIKEHQEIWLASCLYAWR*NSTERDEVLYQFKEGRASILVATDVAPRGL 590
EH + + A+CL+ R ++ ER L FK+G LV +DV RGL
Sbjct: 522 EHFLQQNNL-SAACLHGDR-SAEERQSSLEGFKKGIIRFLVCSDVVARGL 569
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 36.7 bits (81), Expect = 0.012
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Frame = +2
Query: 26 EIVIATPGRLIDFLEK-GTTNLQRCTYLVLDEADRML-DMGF---EPQIRKIIEQIRPDR 190
+IVI TPG D+L+K + + LVLDEAD M+ GF I ++E
Sbjct: 331 QIVIGTPGITRDYLQKYKCIDPSKIRCLVLDEADVMIYHQGFTDISTTIYNMVEDASDSV 390
Query: 191 QTLMWSATWPKEVKKLA 241
Q++++SAT+ + V A
Sbjct: 391 QSMLFSATYDEPVINFA 407
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 36.7 bits (81), Expect = 0.012
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Frame = +2
Query: 26 EIVIATPGRLIDFLEK-GTTNLQRCTYLVLDEADRML-DMGF---EPQIRKIIEQIRPDR 190
+IVI TPG D+L+K + + LVLDEAD M+ GF I ++E
Sbjct: 356 QIVIGTPGITRDYLQKYKCIDPSKIRCLVLDEADVMIYHQGFTDISTTIYNMVEDASDSV 415
Query: 191 QTLMWSATWPKEVKKLA 241
Q++++SAT+ + V A
Sbjct: 416 QSMLFSATYDEPVINFA 432
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 36.7 bits (81), Expect = 0.012
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Frame = +2
Query: 26 EIVIATPGRLIDFLEK-GTTNLQRCTYLVLDEADRML-DMGF---EPQIRKIIEQIRPDR 190
+IVI TPG D+L+K + + LVLDEAD M+ GF I ++E
Sbjct: 740 QIVIGTPGITRDYLQKYKCIDPSKIRCLVLDEADVMIYHQGFTDISTTIYNMVEDASDSV 799
Query: 191 QTLMWSATWPKEVKKLA 241
Q++++SAT+ + V A
Sbjct: 800 QSMLFSATYDEPVINFA 816
>AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical
protein Y38A10A.6 protein.
Length = 520
Score = 33.5 bits (73), Expect = 0.11
Identities = 17/55 (30%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +2
Query: 26 EIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMG-FEPQIRKIIEQIRPD 187
+I T G+L +E T L ++LDE+D+M+D+ F I +++Q++ D
Sbjct: 224 DIAFCTMGKLKASIEDKTILLDNLKMMILDESDKMIDIACFGNDIDWVLDQLQED 278
>U13876-4|AAX88826.1| 115|Caenorhabditis elegans Initiation factor
protein 1, isoformb protein.
Length = 115
Score = 33.1 bits (72), Expect = 0.15
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +3
Query: 477 SCLYAWR*NSTERDEVLYQFKEGRASILVATDVAPRGL 590
SCL+ + ERD ++ +F+ G + +L+ TD+ RG+
Sbjct: 9 SCLHGDM-DQAERDTIMREFRSGSSRVLITTDILARGI 45
>Z92785-2|CAB07200.1| 344|Caenorhabditis elegans Hypothetical
protein F31E9.4 protein.
Length = 344
Score = 32.7 bits (71), Expect = 0.20
Identities = 17/64 (26%), Positives = 31/64 (48%)
Frame = +2
Query: 62 FLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLA 241
FLE+ + C YL+++E LD ++ Q +++E I ++ ++ W K
Sbjct: 113 FLEQEEKMPRSCEYLIINEISTGLDEFWQHQKDELVESISVEKGIVLSGEAWSNSDKIYN 172
Query: 242 EDYL 253
DYL
Sbjct: 173 VDYL 176
>Z81481-6|CAB63435.1| 344|Caenorhabditis elegans Hypothetical
protein C38D9.8 protein.
Length = 344
Score = 31.9 bits (69), Expect = 0.35
Identities = 17/64 (26%), Positives = 31/64 (48%)
Frame = +2
Query: 62 FLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLA 241
FLE+ + C YL+++E LD ++ Q +++E I ++ ++ W K
Sbjct: 113 FLEQEEKMPRSCEYLIINEFSTGLDEFWQHQKDELVETISVEKGIVLSGEAWSSSDKIYN 172
Query: 242 EDYL 253
DYL
Sbjct: 173 VDYL 176
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 31.1 bits (67), Expect = 0.61
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 3/37 (8%)
Frame = +2
Query: 29 IVIATPGRLIDFLEKGTT---NLQRCTYLVLDEADRM 130
+++ATP RL+ L +L + +L++DEADRM
Sbjct: 243 VIVATPARLVQHLTSKIPPPIDLSKLRFLIVDEADRM 279
>U23520-3|AAC46555.2| 470|Caenorhabditis elegans Hypothetical
protein C35B8.3a protein.
Length = 470
Score = 29.9 bits (64), Expect = 1.4
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = +1
Query: 277 GSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEP--GAKTIIFVETKRKAENIS 450
GS+QL A+H Q ++CQE++ + LL+E + E G I+ K A+ ++
Sbjct: 257 GSIQLGADHVPEQWENVCQEYQIRKRQIPLLKETAKQLEQTFGGAQILLPHFKGLAQTLT 316
Query: 451 R 453
+
Sbjct: 317 Q 317
>U23520-2|AAR25655.1| 485|Caenorhabditis elegans Hypothetical
protein C35B8.3b protein.
Length = 485
Score = 29.9 bits (64), Expect = 1.4
Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = +1
Query: 277 GSLQLSANHNILQIVDICQEHEKENKLNVLLQEIGQSQEP--GAKTIIFVETKRKAENIS 450
GS+QL A+H Q ++CQE++ + LL+E + E G I+ K A+ ++
Sbjct: 272 GSIQLGADHVPEQWENVCQEYQIRKRQIPLLKETAKQLEQTFGGAQILLPHFKGLAQTLT 331
Query: 451 R 453
+
Sbjct: 332 Q 332
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 29.5 bits (63), Expect = 1.9
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +3
Query: 510 ERDEVLYQFKEGRASILVATDVAPRGL 590
ERDE + +F+ G +LV T++ RGL
Sbjct: 413 ERDETMERFRRGEIWVLVCTELLGRGL 439
>Z93380-4|CAB07597.1| 339|Caenorhabditis elegans Hypothetical
protein F28C12.5 protein.
Length = 339
Score = 27.5 bits (58), Expect = 7.5
Identities = 16/55 (29%), Positives = 24/55 (43%)
Frame = -3
Query: 529 YRTSSLSVEFYRHAYKQLASHIS*CSLICSQLFSWFQQKLLFSHQVLDFVQFLAI 365
YR+S E + + S S CSL +L S ++ K +HQ V L +
Sbjct: 104 YRSSDCVFELHSYYLTGYFSTYSVCSLAFDRLVSHYKSKFYHTHQYFIAVSLLVL 158
>Z73907-1|CAA98124.1| 4753|Caenorhabditis elegans Hypothetical protein
F29D11.1 protein.
Length = 4753
Score = 27.5 bits (58), Expect = 7.5
Identities = 9/30 (30%), Positives = 19/30 (63%)
Frame = +2
Query: 71 KGTTNLQRCTYLVLDEADRMLDMGFEPQIR 160
KG T + TY++ + D+++D+ EP ++
Sbjct: 2434 KGRTCEEPDTYIMFSDGDKIIDVAIEPDVK 2463
>U40946-3|AAO91681.1| 851|Caenorhabditis elegans Hypothetical
protein W05H9.2 protein.
Length = 851
Score = 27.5 bits (58), Expect = 7.5
Identities = 12/45 (26%), Positives = 24/45 (53%)
Frame = -3
Query: 379 QFLAIIHLIYFLFHVLDKYLQFEECCDLRKVVMILY*SECNLQVI 245
+F A + +I + H++DKY C ++R + + +E + Q I
Sbjct: 596 EFRAGVEIINGIHHIMDKYRGVPHCVEIRATLEAEFHAEMHFQRI 640
>M96150-1|AAA28105.1| 4753|Caenorhabditis elegans LDL receptor-related
protein protein.
Length = 4753
Score = 27.5 bits (58), Expect = 7.5
Identities = 9/30 (30%), Positives = 19/30 (63%)
Frame = +2
Query: 71 KGTTNLQRCTYLVLDEADRMLDMGFEPQIR 160
KG T + TY++ + D+++D+ EP ++
Sbjct: 2434 KGRTCEEPDTYIMFSDGDKIIDVAIEPDVK 2463
>AC024750-3|AAF60440.1| 384|Caenorhabditis elegans Hypothetical
protein Y17G9A.4 protein.
Length = 384
Score = 27.5 bits (58), Expect = 7.5
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +2
Query: 128 MLDMGFEPQIRKIIEQIRPDRQTLMWSATWPKEVKKLAEDYLE 256
++ G I + IE+++ R L WPK VKK+ + +E
Sbjct: 249 LISFGVTLIIIQWIEKVKSPRLPLEMDYIWPKNVKKIVDYVIE 291
>Z81587-1|CAB04701.1| 340|Caenorhabditis elegans Hypothetical
protein T06G6.1 protein.
Length = 340
Score = 27.1 bits (57), Expect = 10.0
Identities = 20/69 (28%), Positives = 29/69 (42%), Gaps = 5/69 (7%)
Frame = -3
Query: 529 YRTSSLSVEFYRHAYKQLASHIS*CSLICSQLFSWFQQKLLFSHQV-----LDFVQFLAI 365
+R+S +E Y + S S SL +L S ++ K HQ L +QFL
Sbjct: 104 FRSSECEIELYFYYLTNYFSTYSVFSLTFDRLISHYKSKYYHMHQYFIAISLLVLQFLLA 163
Query: 364 IHLIYFLFH 338
I Y +H
Sbjct: 164 ILSFYIAYH 172
>U29097-2|AAA68410.2| 1056|Caenorhabditis elegans Human wrn
(werner's syndrome) relatedprotein 1 protein.
Length = 1056
Score = 27.1 bits (57), Expect = 10.0
Identities = 12/42 (28%), Positives = 23/42 (54%)
Frame = +1
Query: 397 GAKTIIFVETKRKAENISRNIRRYGWPAVCMHGDKTQQKEMK 522
G TII+ +TK+ ++++ +RR G + H T+ + K
Sbjct: 446 GGPTIIYCQTKQMVDDVNCVLRRIGVRSAHYHAGLTKNQREK 487
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,489,405
Number of Sequences: 27780
Number of extensions: 281091
Number of successful extensions: 1027
Number of sequences better than 10.0: 66
Number of HSP's better than 10.0 without gapping: 898
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1001
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1247656244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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