Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20229
         (787 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    24   1.6  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    23   2.8  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    23   2.8  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    23   2.8  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    23   3.7  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    22   4.8  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    22   6.4  

>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
 Frame = +2

Query: 587 PDTKGVPLIADMSSNIMSKKVDVSKFGVIYAGAQKNI-GTSG 709
           P TK   LI    S +  K +  + FGV Y G    I G+SG
Sbjct: 73  PKTKFFNLIKRKDSPVQKKHILKNVFGVAYPGELLAILGSSG 114


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = +3

Query: 513 TLIPMLHMYIFVLMKQYMVLNLTSYQ 590
           T IPML+ Y+F ++   +V+ L  Y+
Sbjct: 84  TSIPMLYAYVFYVVTTVLVV-LVGYE 108


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = +3

Query: 513 TLIPMLHMYIFVLMKQYMVLNLTSYQ 590
           T IPML+ Y+F ++   +V+ L  Y+
Sbjct: 84  TSIPMLYAYVFYVVTTVLVV-LVGYE 108


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 10/26 (38%), Positives = 17/26 (65%)
 Frame = +3

Query: 513 TLIPMLHMYIFVLMKQYMVLNLTSYQ 590
           T IPML+ Y+F ++   +V+ L  Y+
Sbjct: 84  TSIPMLYAYVFYVVTTVLVV-LVGYE 108


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 22.6 bits (46), Expect = 3.7
 Identities = 8/32 (25%), Positives = 20/32 (62%)
 Frame = -2

Query: 138 SSAKIKHFRHFHLFIYLINSYTTLFYQTDTIV 43
           +SA +  F  +H+F++++ +    FY++  I+
Sbjct: 49  ASAVLLPFAIYHIFMHIVPTKLISFYKSTAIL 80


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -2

Query: 666 PNFETSTFFDIMFEDISAIKGT 601
           P F  + FFDI    I ++ GT
Sbjct: 318 PKFSAANFFDIERSTILSVLGT 339


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = +3

Query: 234 FFNIHEANVEIQDVVRNLLDV 296
           + N H + +++  VVRNLLD+
Sbjct: 56  YMNAHLSGIQL--VVRNLLDI 74


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 186,331
Number of Sequences: 336
Number of extensions: 4161
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21272645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)