Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS20229
         (787 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.     25   0.60 
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    24   1.4  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   3.2  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   3.2  
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    22   7.4  
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    22   7.4  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    22   7.4  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    22   7.4  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    22   7.4  

>AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.
          Length = 247

 Score = 25.4 bits (53), Expect = 0.60
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = +1

Query: 151 PEEVYEIIKNELTNFENSGISLLETSHRSSTYMKL 255
           P + Y++  N +TNF+NS I  L+  H   T  K+
Sbjct: 152 PFKEYQMNGNNITNFKNSNIFQLK-QHMRDTMNKI 185


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = +1

Query: 706 WGSACHC*RGSFESGSTDMPSLLDW 780
           WG+ C    G + +G+T + S +DW
Sbjct: 371 WGAEC----GKYPNGNTKVGSYIDW 391


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +1

Query: 103  VKMSKVFNFGAGPAKLPEEVYEI 171
            V + +  N G GP K+PE   +I
Sbjct: 1672 VALQQAANTGGGPDKIPETAEDI 1694


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = +1

Query: 103  VKMSKVFNFGAGPAKLPEEVYEI 171
            V + +  N G GP K+PE   +I
Sbjct: 1668 VALQQAANTGGGPDKIPETAEDI 1690


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = -3

Query: 251 FMYVEER*LVSNKLIPEFSKFVN 183
           F+ + +  L+ + LI +FSKF N
Sbjct: 82  FLLLNDPELIKDILIRDFSKFAN 104


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +2

Query: 530 SYVHICTNETIHGVEF 577
           +Y+++  N T+H VEF
Sbjct: 360 NYLYLTYNGTVHDVEF 375


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = -3

Query: 113 DIFTYLFI*LIPTLHYFTKRTLSFSDVSRYD 21
           D+ T+L    +  L   T+R+L  SD+  +D
Sbjct: 307 DLVTFLCYPSVMNLDDLTRRSLYLSDIPLHD 337


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 14/34 (41%), Positives = 19/34 (55%)
 Frame = -3

Query: 749 PDSKDPL*Q*QALPQMYQYSFEHQHISPQTLKHQ 648
           PDS  PL + Q   QM+    +H H+ PQ  +HQ
Sbjct: 158 PDSP-PLVESQMHHQMHT---QHPHMQPQQGQHQ 187


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = -3

Query: 113 DIFTYLFI*LIPTLHYFTKRTLSFSDVSRYD 21
           D+ T+L    +  L   T+R+L  SD+  +D
Sbjct: 307 DLVTFLCYPSVMNLDDLTRRSLYLSDIPLHD 337


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 213,785
Number of Sequences: 438
Number of extensions: 4716
Number of successful extensions: 11
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24760908
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)