Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20225
(701 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0532 - 16824394-16824447,16824545-16824665,16824748-168248... 85 7e-17
08_02_1322 + 26131395-26131599,26132382-26132468,26133119-261333... 82 5e-16
02_03_0280 - 17256524-17256733,17256838-17256958,17257318-172574... 76 2e-14
01_06_1791 - 39907362-39907453,39907682-39907753,39907941-399080... 65 4e-11
06_03_1031 - 27018871-27018916,27018987-27019110,27019251-270193... 64 8e-11
09_04_0633 - 19123930-19124009,19124240-19124344,19124453-191245... 62 4e-10
09_02_0288 + 6936867-6936879,6936965-6937038,6937445-6937588,693... 56 4e-08
08_02_1436 + 27083698-27084111,27084333-27084416,27084502-270845... 55 5e-08
02_05_0823 - 32036445-32036546,32036867-32036919,32037513-320375... 53 2e-07
02_05_0767 + 31609773-31610174,31610409-31610501,31610608-316106... 52 4e-07
04_04_0027 + 22232781-22233051,22234256-22234329,22234471-222346... 50 2e-06
01_06_1316 + 36245368-36245507,36247229-36247315,36248334-362484... 49 3e-06
05_05_0095 - 22347552-22347696,22347988-22348094,22348114-223482... 45 5e-05
09_01_0022 + 426649-426663,427170-427420,427479-427577,428321-42... 43 3e-04
01_05_0366 + 21419270-21419312,21420372-21420458,21420625-214209... 42 5e-04
01_05_0361 + 21377080-21377281,21378619-21378705,21379862-213801... 39 0.004
09_01_0020 + 413723-413738,413867-413934,414849-415144,415275-41... 34 0.13
07_03_0434 + 18175560-18175695,18176068-18176177,18176553-181766... 33 0.22
11_01_0294 + 2212807-2212876,2213664-2213843,2214505-2214594,221... 33 0.29
01_05_0372 + 21541220-21541457,21541832-21541912,21542027-215420... 33 0.29
12_01_0295 + 2235209-2235263,2236182-2236361,2236478-2236567,223... 32 0.51
03_03_0065 + 14192725-14192813,14193004-14193088,14193971-141940... 31 0.67
01_06_0158 - 27079262-27079346,27079662-27079750,27080540-270806... 31 0.89
01_05_0359 + 21350580-21350829,21350990-21351064,21351156-213512... 29 2.7
>04_03_0532 -
16824394-16824447,16824545-16824665,16824748-16824875,
16825457-16825603,16825682-16825807,16825895-16826160,
16826259-16826453,16826577-16826657,16826756-16826830,
16827270-16827530,16827633-16827719,16827844-16828060
Length = 585
Score = 84.6 bits (200), Expect = 7e-17
Identities = 37/66 (56%), Positives = 46/66 (69%)
Frame = +3
Query: 57 GVTVETISPGDESTYPKSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRIGKSEVIRGWD 236
G+ + G+ P+SG V VHYTGTL +G KFDSSRDRG PFKF +G+ EVI+GWD
Sbjct: 50 GLRKRLLKEGEGWDRPESGDEVQVHYTGTLLDGTKFDSSRDRGTPFKFSLGQGEVIKGWD 109
Query: 237 EGVAKM 254
EG+ M
Sbjct: 110 EGIKTM 115
Score = 50.0 bits (114), Expect = 2e-06
Identities = 23/47 (48%), Positives = 31/47 (65%)
Frame = +2
Query: 260 GERAKLTCSPDYAYGQQGHPGVIPPNSTLIFDVELLRLE*IQFVTKN 400
GE+A T P+ AYG+ G P IPPN+TL FDVELL ++ + K+
Sbjct: 118 GEQAVFTVPPELAYGEAGSPPAIPPNATLRFDVELLSWASVKDICKD 164
Score = 41.5 bits (93), Expect = 6e-04
Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 5/41 (12%)
Frame = +2
Query: 260 GERAKLTCSPDYAYGQQGHP-----GVIPPNSTLIFDVELL 367
GE+ LT P Y +G+QG P +PPN+TL D+ELL
Sbjct: 230 GEKVLLTVKPQYGFGEQGKPASGAEAAVPPNATLYVDLELL 270
Score = 37.5 bits (83), Expect = 0.010
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +3
Query: 69 ETISPGDESTYPKSGQTVVVHYTGTLTNGKKFDSS-RDRGKPFKFRIGKSEVIRGWDEGV 245
+ + G+ P G V V + G L +G F D +PF+FR + +VI G D V
Sbjct: 287 KVLKEGEGYERPNDGAVVRVRFIGKLEDGTVFSKKGHDGDEPFEFRTDEEQVIEGLDRTV 346
Query: 246 AKM 254
M
Sbjct: 347 VTM 349
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Frame = +2
Query: 260 GERAKLTCSPDYAYGQ---QGHPGVIPPNSTLIFDVELLRLE 376
GE A + P +A+G + V+P NST+ ++VEL+ E
Sbjct: 352 GEVALVRLPPQHAFGSTETKQDLAVVPANSTVWYEVELVSFE 393
>08_02_1322 +
26131395-26131599,26132382-26132468,26133119-26133372,
26133430-26133526,26133613-26133693,26133782-26133976,
26134093-26134182,26134296-26134471,26134565-26134687,
26134799-26134945,26135027-26135163,26135247-26135364,
26135462-26135518
Length = 588
Score = 81.8 bits (193), Expect = 5e-16
Identities = 35/66 (53%), Positives = 47/66 (71%)
Frame = +3
Query: 57 GVTVETISPGDESTYPKSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRIGKSEVIRGWD 236
G+ + + G+ P+ G V VHYTGTL +GKKFDSSRDRG PFKF++G+ +VI+GWD
Sbjct: 46 GLRKKLLKEGEGWETPEVGDEVEVHYTGTLLDGKKFDSSRDRGTPFKFKLGQGQVIKGWD 105
Query: 237 EGVAKM 254
G+ M
Sbjct: 106 LGIKTM 111
Score = 46.0 bits (104), Expect = 3e-05
Identities = 21/36 (58%), Positives = 24/36 (66%)
Frame = +2
Query: 260 GERAKLTCSPDYAYGQQGHPGVIPPNSTLIFDVELL 367
GE A T PD AYG+ G P IP ++TL FDVELL
Sbjct: 114 GENAVFTIPPDLAYGESGSPPTIPASATLQFDVELL 149
Score = 37.9 bits (84), Expect = 0.008
Identities = 16/40 (40%), Positives = 25/40 (62%), Gaps = 5/40 (12%)
Frame = +2
Query: 263 ERAKLTCSPDYAYGQQGHP-----GVIPPNSTLIFDVELL 367
E+ LT P Y +G+ G P G +PPN+TL+ ++EL+
Sbjct: 232 EKVLLTVKPQYGFGENGRPAAGEEGAVPPNATLLVNLELV 271
Score = 37.5 bits (83), Expect = 0.010
Identities = 18/39 (46%), Positives = 26/39 (66%), Gaps = 3/39 (7%)
Frame = +2
Query: 260 GERAKLTCSPDYAYGQQGHP---GVIPPNSTLIFDVELL 367
GE A +T P+YA+G V+PPNST+I++VEL+
Sbjct: 353 GEVALVTIPPEYAFGSTESKQDLAVVPPNSTVIYEVELV 391
Score = 36.7 bits (81), Expect = 0.018
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +3
Query: 69 ETISPGDESTYPKSGQTVVVHYTGTLTNGKKFDSS-RDRGKPFKFRIGKSEVIRGWDEGV 245
+ ++ G P G V V TG L +G F D +PF+F+ + EVI G D V
Sbjct: 288 KVLTEGTGYERPNEGAVVKVKITGKLQDGTIFTKKGHDEPEPFEFKTDEEEVIDGIDRAV 347
Query: 246 AKM 254
M
Sbjct: 348 LNM 350
>02_03_0280 -
17256524-17256733,17256838-17256958,17257318-17257445,
17257603-17257671,17257757-17257882,17257970-17258235,
17258341-17258535,17258614-17258694,17258729-17258851,
17258941-17259201,17260044-17260130,17260260-17260578
Length = 661
Score = 76.2 bits (179), Expect = 2e-14
Identities = 33/66 (50%), Positives = 44/66 (66%)
Frame = +3
Query: 57 GVTVETISPGDESTYPKSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRIGKSEVIRGWD 236
G+ + + G+ P +G V VHYTGTL +G KFDSSRDR PFKF +G+ +VI+GWD
Sbjct: 84 GLRKKLVKEGEGWERPDAGDEVQVHYTGTLLDGTKFDSSRDRDAPFKFTLGQGQVIKGWD 143
Query: 237 EGVAKM 254
G+ M
Sbjct: 144 LGIKTM 149
Score = 52.8 bits (121), Expect = 3e-07
Identities = 24/47 (51%), Positives = 32/47 (68%)
Frame = +2
Query: 260 GERAKLTCSPDYAYGQQGHPGVIPPNSTLIFDVELLRLE*IQFVTKN 400
GE A T P+ AYG+ G P VIPPN+TL FDVEL+ E ++ + K+
Sbjct: 152 GENAIFTIPPELAYGEDGSPPVIPPNATLQFDVELISWESVKDICKD 198
Score = 37.9 bits (84), Expect = 0.008
Identities = 18/40 (45%), Positives = 25/40 (62%), Gaps = 5/40 (12%)
Frame = +2
Query: 263 ERAKLTCSPDYAYGQQGHP-----GVIPPNSTLIFDVELL 367
E+A LT P Y +G+QG P IPPN+TL ++EL+
Sbjct: 281 EKALLTVKPQYGFGEQGRPAARDEAAIPPNATLHINLELV 320
Score = 35.9 bits (79), Expect = 0.031
Identities = 17/42 (40%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
Frame = +2
Query: 260 GERAKLTCSPDYAYGQ---QGHPGVIPPNSTLIFDVELLRLE 376
GE A +T P+YA+G + V+PPNST+ ++VEL+ +
Sbjct: 402 GEVALVTIPPEYAFGSDETRQDLSVVPPNSTVYYEVELVSFD 443
>01_06_1791 -
39907362-39907453,39907682-39907753,39907941-39908045,
39908212-39908302,39908787-39908849,39909448-39909497,
39909632-39909716
Length = 185
Score = 65.3 bits (152), Expect = 4e-11
Identities = 26/48 (54%), Positives = 35/48 (72%)
Frame = +3
Query: 111 GQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRIGKSEVIRGWDEGVAKM 254
G + VHY G+LT+G FDSS DRG PF+F +G +VI+GWD+G+ M
Sbjct: 58 GDKIKVHYRGSLTDGSVFDSSYDRGDPFEFTLGNGQVIKGWDQGLLGM 105
Score = 39.9 bits (89), Expect = 0.002
Identities = 18/37 (48%), Positives = 23/37 (62%)
Frame = +2
Query: 257 VGERAKLTCSPDYAYGQQGHPGVIPPNSTLIFDVELL 367
VGE+ KL YG++G P IP +TLIFD EL+
Sbjct: 107 VGEKRKLKIPAKMGYGERGSPPKIPGGATLIFDTELI 143
>06_03_1031 -
27018871-27018916,27018987-27019110,27019251-27019311,
27019466-27019558,27019663-27020016
Length = 225
Score = 64.5 bits (150), Expect = 8e-11
Identities = 26/47 (55%), Positives = 33/47 (70%)
Frame = +3
Query: 105 KSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRIGKSEVIRGWDEGV 245
+ GQ + HYTG L +G FDSS RGKP FR+G EVI+GWD+G+
Sbjct: 112 EQGQLIKAHYTGRLEDGTVFDSSYKRGKPLTFRVGVGEVIKGWDQGI 158
Score = 36.3 bits (80), Expect = 0.024
Identities = 21/46 (45%), Positives = 27/46 (58%), Gaps = 8/46 (17%)
Frame = +2
Query: 260 GERAKLTCSPDYAYGQQG------HPG--VIPPNSTLIFDVELLRL 373
G + L P+ AYG +G P VIPPNSTL+FDVE+ R+
Sbjct: 170 GGKRSLRLPPELAYGARGAGCRGWEPTSCVIPPNSTLLFDVEMFRV 215
>09_04_0633 -
19123930-19124009,19124240-19124344,19124453-19124543,
19124647-19124709,19126318-19126368,19126878-19126962,
19127102-19127283,19128493-19128582
Length = 248
Score = 62.1 bits (144), Expect = 4e-10
Identities = 27/58 (46%), Positives = 35/58 (60%)
Frame = +3
Query: 81 PGDESTYPKSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRIGKSEVIRGWDEGVAKM 254
P S G V VHY G LT+G FDSS +RG P +F +G +VI+GWD+G+ M
Sbjct: 139 PESCSIQAHKGDRVKVHYRGKLTDGTDFDSSYERGDPIEFELGTGQVIKGWDQGILGM 196
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/37 (51%), Positives = 22/37 (59%)
Frame = +2
Query: 257 VGERAKLTCSPDYAYGQQGHPGVIPPNSTLIFDVELL 367
VGE+ KL YG QG P IP +TLIFD EL+
Sbjct: 198 VGEKRKLKIPSKLGYGAQGSPPTIPGGATLIFDTELV 234
>09_02_0288 +
6936867-6936879,6936965-6937038,6937445-6937588,
6937754-6937958,6938552-6938852,6938952-6939150,
6939393-6939477,6939554-6939595,6939676-6939724,
6939872-6939941,6940296-6940301
Length = 395
Score = 55.6 bits (128), Expect = 4e-08
Identities = 27/67 (40%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Frame = +3
Query: 57 GVTVETISPGD-ESTYPKSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRIGKSEVIRGW 233
G+ VE +S G+ ++ +G V + Y GTL +GK +S+ KP+KF++G +VIRGW
Sbjct: 291 GLIVEDLSTGNLDAEMASNGSKVSIKYVGTLQDGKIVESNVGE-KPYKFKLGAGKVIRGW 349
Query: 234 DEGVAKM 254
D G+ M
Sbjct: 350 DVGICGM 356
Score = 37.1 bits (82), Expect = 0.013
Identities = 17/44 (38%), Positives = 29/44 (65%)
Frame = +2
Query: 242 CGKDAVGERAKLTCSPDYAYGQQGHPGVIPPNSTLIFDVELLRL 373
CG VG++ KLT P YG + G +P NS++I+++EL+++
Sbjct: 354 CGM-RVGDKRKLTVPPAMCYGSKAI-GEVPKNSSIIYEIELVKV 395
>08_02_1436 +
27083698-27084111,27084333-27084416,27084502-27084551,
27084676-27084724,27085471-27085545,27085724-27085837
Length = 261
Score = 55.2 bits (127), Expect = 5e-08
Identities = 26/66 (39%), Positives = 39/66 (59%)
Frame = +3
Query: 57 GVTVETISPGDESTYPKSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRIGKSEVIRGWD 236
G+ + I G E P G V +Y + NG+ FDSS ++G+P+ FR+G +VI+G D
Sbjct: 147 GLQYKDIKVG-EGPSPPIGFQVAANYVAMVPNGQIFDSSLEKGQPYIFRVGSGQVIKGLD 205
Query: 237 EGVAKM 254
EG+ M
Sbjct: 206 EGILSM 211
>02_05_0823 -
32036445-32036546,32036867-32036919,32037513-32037574,
32037804-32037837,32038144-32038231
Length = 112
Score = 53.2 bits (122), Expect = 2e-07
Identities = 30/66 (45%), Positives = 37/66 (56%), Gaps = 4/66 (6%)
Frame = +3
Query: 69 ETISPGDESTYPKSGQTVVVHYTGTLTNG---KKFDSSRDRGK-PFKFRIGKSEVIRGWD 236
+TI P GQ V VH TG + KKF S++D G+ PF F IG+ VI+GWD
Sbjct: 5 KTILKAGTGPKPVKGQKVTVHCTGFGKDNDLAKKFWSTKDAGQEPFSFNIGQGSVIKGWD 64
Query: 237 EGVAKM 254
EGV M
Sbjct: 65 EGVMTM 70
Score = 48.4 bits (110), Expect = 5e-06
Identities = 21/38 (55%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Frame = +2
Query: 257 VGERAKLTCSPDYAYGQQGHPG-VIPPNSTLIFDVELL 367
VGE A++ C+PDYAYG G P I PNS L+F++E+L
Sbjct: 72 VGEVARIQCTPDYAYGASGFPAWGIRPNSVLVFEIEVL 109
>02_05_0767 +
31609773-31610174,31610409-31610501,31610608-31610668,
31610797-31610865,31611274-31611440
Length = 263
Score = 52.0 bits (119), Expect = 4e-07
Identities = 20/49 (40%), Positives = 32/49 (65%)
Frame = +3
Query: 102 PKSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRIGKSEVIRGWDEGVA 248
P GQ + VHYT T+G FDS+ RG+P R+G +++RG ++G++
Sbjct: 127 PPRGQLINVHYTARFTDGIVFDSTYKRGRPLTMRLGAGKILRGLEQGIS 175
>04_04_0027 +
22232781-22233051,22234256-22234329,22234471-22234638,
22234812-22234971,22235062-22235145,22235781-22236078,
22236158-22236364,22236465-22236735,22236971-22237055,
22237141-22237182,22237302-22237350,22237825-22237894,
22238314-22238463,22238592-22238619,22238856-22238990,
22240693-22241469,22242133-22242192,22242367-22242413
Length = 991
Score = 49.6 bits (113), Expect = 2e-06
Identities = 29/67 (43%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Frame = +3
Query: 57 GVTVETISPGDESTYPKS-GQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRIGKSEVIRGW 233
G+ +E I G S G+ V V Y G L NG FDS+ R + F FR+G EVI+GW
Sbjct: 490 GMIIEEIEMGKPDGKKASPGKKVSVKYIGKLKNGTIFDSTVGR-RAFDFRLGIGEVIKGW 548
Query: 234 DEGVAKM 254
D G+ M
Sbjct: 549 DIGINGM 555
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/37 (51%), Positives = 25/37 (67%)
Frame = +2
Query: 257 VGERAKLTCSPDYAYGQQGHPGVIPPNSTLIFDVELL 367
VG++ +LT P YG + G IP NSTL+FDVEL+
Sbjct: 557 VGDKRRLTIPPSMGYGNK-RMGPIPQNSTLVFDVELV 592
>01_06_1316 +
36245368-36245507,36247229-36247315,36248334-36248439,
36249028-36249204,36249296-36249375,36249432-36249440,
36249474-36249566,36249788-36249947
Length = 283
Score = 49.2 bits (112), Expect = 3e-06
Identities = 23/40 (57%), Positives = 29/40 (72%), Gaps = 3/40 (7%)
Frame = +2
Query: 257 VGERAKLTCSPDYAYGQQGHPGVIPP---NSTLIFDVELL 367
VGE AK+TC P+YAYG G P IPP ++TL F+VEL+
Sbjct: 171 VGEVAKITCKPEYAYGAAGSPPEIPPEVQSATLTFEVELI 210
Score = 43.6 bits (98), Expect = 2e-04
Identities = 20/44 (45%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +3
Query: 126 VHYTGTLT-NGKKFDSSRDRGKPFKFRIGKSEVIRGWDEGVAKM 254
VHY GTL NG+ FD++ + F F IG+ VI+ WD V M
Sbjct: 126 VHYEGTLAENGEVFDTTHEDNSVFSFEIGEGTVIKAWDIAVKTM 169
>05_05_0095 -
22347552-22347696,22347988-22348094,22348114-22348236,
22348325-22348458,22348766-22348874
Length = 205
Score = 45.2 bits (102), Expect = 5e-05
Identities = 19/31 (61%), Positives = 21/31 (67%)
Frame = +2
Query: 257 VGERAKLTCSPDYAYGQQGHPGVIPPNSTLI 349
VGE AK+TC P+YAYG G P IPP S I
Sbjct: 82 VGEVAKITCKPEYAYGSAGSPPEIPPKSVAI 112
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Frame = +3
Query: 87 DESTYPKSGQTVV-VHYTGTLT-NGKKFDSSRDRGKPFKFRIGKSEVIRGWDEGVAKM 254
D++ P +V VHY GTL NG+ FD++ + F F IG+ VI+ WD + M
Sbjct: 23 DDAIAPTDSLPLVDVHYEGTLAENGEVFDTTHEDNSIFSFEIGQGAVIKAWDIALRTM 80
>09_01_0022 +
426649-426663,427170-427420,427479-427577,428321-428473,
428893-429051,429146-429287,429460-429544,429629-429670,
429784-429832,430540-430639,431240-431287
Length = 380
Score = 42.7 bits (96), Expect = 3e-04
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Frame = +3
Query: 57 GVTVETISPGDESTYPKS-GQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRIGKSEVIRGW 233
G+T+E ++ G+ S G+ V V Y L+NG D + + KF++G EVI GW
Sbjct: 252 GMTIEDLAKGNVGAKIASCGKKVYVKYVCMLSNGDTVDPTGE-SSTCKFKLGAGEVISGW 310
Query: 234 DEGVAKM 254
D G+ M
Sbjct: 311 DLGIDGM 317
Score = 34.7 bits (76), Expect = 0.072
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = +2
Query: 257 VGERAKLTCSPDYAYGQQGHPGVIPPNSTLIFDVELLRLE 376
VG +L P YG G G IPPN+ L FD+ELL+++
Sbjct: 319 VGGIRRLGIPPHLGYGDVGR-GNIPPNAWLNFDIELLKVK 357
>01_05_0366 +
21419270-21419312,21420372-21420458,21420625-21420900,
21421560-21421634,21421736-21421816,21422117-21422308,
21422756-21422772
Length = 256
Score = 41.9 bits (94), Expect = 5e-04
Identities = 25/74 (33%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Frame = +3
Query: 126 VHYTGTLTNGKKFDSSRDRGKPFKFRIGKSEVIRGWDEGVAKML*VSVPN*PALLTM--- 296
VH+TG L +G +F SSR+ P +F +G+ +V+ G++ V+ M P A+ T+
Sbjct: 15 VHFTGELVDGTQFVSSRENDIPERFILGQEDVMHGFNLAVSSM----QPGEKAIFTIPSA 70
Query: 297 LTVSKATLESYLPT 338
LT++KA + +P+
Sbjct: 71 LTMTKAGSPASIPS 84
Score = 32.3 bits (70), Expect = 0.38
Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 5/34 (14%)
Frame = +2
Query: 260 GERAKLTCSPDYAYGQQGHP-----GVIPPNSTL 346
GE A L P YA+G+QG P +PP++TL
Sbjct: 177 GEEAVLIVKPKYAFGEQGRPSQGEEAAVPPDATL 210
>01_05_0361 +
21377080-21377281,21378619-21378705,21379862-21380134,
21380304-21380378,21380470-21380550,21380837-21381034,
21381145-21381234,21381310-21381467,21381619-21381741,
21381891-21382034,21382175-21382285,21382583-21382624,
21383043-21383261,21385319-21385627
Length = 703
Score = 38.7 bits (86), Expect = 0.004
Identities = 17/43 (39%), Positives = 26/43 (60%)
Frame = +3
Query: 126 VHYTGTLTNGKKFDSSRDRGKPFKFRIGKSEVIRGWDEGVAKM 254
VH+TG +G F S+R+ G P F +G+ V+RG+ V+ M
Sbjct: 68 VHFTGKRLDGTWFASTREDGVPLTFILGQENVMRGFSMAVSSM 110
Score = 35.1 bits (77), Expect = 0.054
Identities = 15/52 (28%), Positives = 31/52 (59%), Gaps = 5/52 (9%)
Frame = +2
Query: 260 GERAKLTCSPDYAYGQQGHPGV-----IPPNSTLIFDVELLRLE*IQFVTKN 400
GE A L P+Y +G++G P + +PP++TL ++L+ + ++ + +N
Sbjct: 229 GEEAVLIVKPEYGFGERGRPSIGDEAGVPPDATLYVYLQLMSWKTVRHIGEN 280
Score = 29.1 bits (62), Expect = 3.6
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 5/43 (11%)
Frame = +2
Query: 260 GERAKLTCSPDYAYGQQGH-----PGVIPPNSTLIFDVELLRL 373
GE+A T P+ A G + PG I PN L FD+EL+ L
Sbjct: 113 GEKAVFTIPPELA-GTKSRCPVDIPGNIAPNEALRFDIELISL 154
>09_01_0020 +
413723-413738,413867-413934,414849-415144,415275-415400,
415484-415566,416514-416628,416755-416847,416963-417021,
417609-417684,417812-417901,418050-418202,418294-418480,
418752-418839,419077-419125,419233-419329
Length = 531
Score = 33.9 bits (74), Expect = 0.13
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = +2
Query: 257 VGERAKLTCSPDYAYGQQGHPGVIPPNSTLIFDVELLRLE 376
VG + +LT P YG P IP NS L+++VELL ++
Sbjct: 487 VGGKRRLTIPPAQGYGDVATPK-IPANSWLVYEVELLEVK 525
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +3
Query: 57 GVTVETISPGD-ESTYPKSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRIG 209
G+ VE + G+ ++ G+ V V Y G L NG+ D + FR+G
Sbjct: 433 GIKVEHLVEGNAKAKVASKGKQVCVRYCGRLINGEVIDPTNLDDDTHTFRLG 484
>07_03_0434 +
18175560-18175695,18176068-18176177,18176553-18176616,
18176839-18176915,18177152-18177223,18178337-18178456
Length = 192
Score = 33.1 bits (72), Expect = 0.22
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +3
Query: 57 GVTVETISPGDESTYPKSGQTVVVHYTGTLTNGKKFDSSRDRG 185
G+ E I G ++ PK GQ V+ HY G +G++ DS+ +G
Sbjct: 63 GLLYEDIKVGTGNS-PKDGQQVIFHYVGYNESGRRIDSTYIQG 104
>11_01_0294 +
2212807-2212876,2213664-2213843,2214505-2214594,
2215054-2215238,2215399-2215521,2215593-2215745,
2216090-2216416
Length = 375
Score = 32.7 bits (71), Expect = 0.29
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +2
Query: 230 LG*GCGKDAVGERAKLTCSPDYAYGQQGHPGV--IPPNSTLIFDVELL 367
LG G G GERA L + YG++G +PP + L+++VEL+
Sbjct: 121 LGIGVGNMRSGERALLHVGWELGYGKEGSFSFPNVPPMADLLYEVELI 168
>01_05_0372 +
21541220-21541457,21541832-21541912,21542027-21542092,
21543050-21543178,21544619-21544674,21545451-21545732
Length = 283
Score = 32.7 bits (71), Expect = 0.29
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 4/51 (7%)
Frame = +2
Query: 260 GERAKLTCSPDYAYGQQGHPGVIP----PNSTLIFDVELLRLE*IQFVTKN 400
GERA T P A + G P IP P TL F++EL+ L I + +N
Sbjct: 4 GERAIFTIPPKLAITKSGSPASIPSSIPPEQTLRFEIELISLFAITDILEN 54
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 5/40 (12%)
Frame = +2
Query: 260 GERAKLTCSPDYAYGQQGH-----PGVIPPNSTLIFDVEL 364
GE A P YA+G QG +PP++TL V+L
Sbjct: 118 GEEAIFIVKPRYAFGAQGRDSTGDQAAVPPDATLYLYVQL 157
>12_01_0295 +
2235209-2235263,2236182-2236361,2236478-2236567,
2236947-2237131,2237200-2237358,2237437-2237589,
2237938-2238264
Length = 382
Score = 31.9 bits (69), Expect = 0.51
Identities = 18/58 (31%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Frame = +2
Query: 230 LG*GCGKDAVGERAKLTCSPDYAYGQQGHPGV--IPPNSTLIFDVELLRLE*IQFVTK 397
LG G GERA L + + YG++G +PP + L+++VEL+ + ++ V +
Sbjct: 116 LGIGVSNMRSGERALLHVNWELGYGKEGSFSFPNVPPMADLVYEVELIGFDDVKEVPR 173
>03_03_0065 +
14192725-14192813,14193004-14193088,14193971-14194040,
14194730-14194827,14194931-14195101,14196192-14196224,
14196762-14196820,14197143-14197190,14197399-14197480,
14198317-14198475,14199036-14199093,14199801-14199949,
14200403-14200503,14200574-14200643,14201088-14201147,
14201883-14201939,14202247-14202315,14202485-14202562,
14202996-14203097,14203203-14203274,14203361-14203648
Length = 665
Score = 31.5 bits (68), Expect = 0.67
Identities = 14/40 (35%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Frame = +2
Query: 260 GERAKLTCSPDYAYGQQGH-PGVIPPNSTLIFDVELLRLE 376
GE++ +TC PD+AY + P +P + + +++ELL E
Sbjct: 382 GEKSIVTCPPDFAYDKFPRLPANVPEGAHVQWEIELLGFE 421
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/40 (37%), Positives = 24/40 (60%)
Frame = +3
Query: 135 TGTLTNGKKFDSSRDRGKPFKFRIGKSEVIRGWDEGVAKM 254
T +GK+ S++ +P+ F IGKSEV +G + G+ M
Sbjct: 220 TARTGDGKELLPSKE--EPYFFTIGKSEVPKGLEMGIGSM 257
>01_06_0158 -
27079262-27079346,27079662-27079750,27080540-27080659,
27080738-27080894,27081167-27081231,27081323-27081436,
27082109-27082178,27082412-27082642,27082963-27083039,
27083143-27083237,27084514-27084574,27084678-27085073
Length = 519
Score = 31.1 bits (67), Expect = 0.89
Identities = 16/51 (31%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +3
Query: 84 GDESTYPKSGQTVVVHY-TGTLTNGKKFDSSRDRGKPFKFRIGKSEVIRGW 233
G STY K+G+ +HY TG ++ DS + K ++ S+V+ W
Sbjct: 144 GQSSTYKKNGKPASIHYGTGAISGYFSQDSVKVGDVAVKNQLRGSQVLHSW 194
>01_05_0359 +
21350580-21350829,21350990-21351064,21351156-21351236,
21352633-21352830,21352930-21353019,21353096-21353253,
21353350-21353472,21354989-21355096,21355530-21355826
Length = 459
Score = 29.5 bits (63), Expect = 2.7
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 4/42 (9%)
Frame = +2
Query: 260 GERAKLTCSPDYAYGQQGHPGVIP----PNSTLIFDVELLRL 373
GE+A T P+ A + P IP PN L FDVEL+ L
Sbjct: 9 GEKAVFTIPPELAGTKSRCPADIPANLPPNQALQFDVELISL 50
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,426,026
Number of Sequences: 37544
Number of extensions: 350755
Number of successful extensions: 794
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 740
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 780
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1803843684
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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