Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS20225
(701 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U27353-1|AAA68610.1| 108|Caenorhabditis elegans rotamase protein. 98 6e-21
AL034393-20|CAA22330.1| 108|Caenorhabditis elegans Hypothetical... 98 6e-21
AL034393-19|CAA22328.1| 290|Caenorhabditis elegans Hypothetical... 83 1e-16
Z92832-2|CAB07371.1| 431|Caenorhabditis elegans Hypothetical pr... 76 3e-14
Z68760-1|CAA92994.1| 139|Caenorhabditis elegans Hypothetical pr... 61 9e-10
AF016430-1|AAB65370.1| 261|Caenorhabditis elegans Fk506-binding... 41 7e-04
U80445-9|AAB37799.1| 264|Caenorhabditis elegans Fk506-binding p... 40 0.001
U80445-8|AAK68259.1| 300|Caenorhabditis elegans Fk506-binding p... 40 0.001
Z75554-8|CAA99959.2| 259|Caenorhabditis elegans Hypothetical pr... 36 0.028
Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical p... 29 4.3
Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical p... 29 4.3
Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z81553-1|CAB04490.2| 327|Caenorhabditis elegans Hypothetical pr... 27 9.8
>U27353-1|AAA68610.1| 108|Caenorhabditis elegans rotamase protein.
Length = 108
Score = 97.9 bits (233), Expect = 6e-21
Identities = 44/67 (65%), Positives = 51/67 (76%)
Frame = +3
Query: 54 MGVTVETISPGDESTYPKSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRIGKSEVIRGW 233
MGV + + GD T PK+GQTV HY TL NGKK DSSRDRG PFKF+IGK EVI+GW
Sbjct: 1 MGVDRQILVEGDNVTKPKNGQTVTCHYVLTLENGKKIDSSRDRGTPFKFKIGKGEVIKGW 60
Query: 234 DEGVAKM 254
D+GVA+M
Sbjct: 61 DQGVAQM 67
Score = 50.8 bits (116), Expect = 9e-07
Identities = 23/43 (53%), Positives = 31/43 (72%)
Frame = +2
Query: 239 GCGKDAVGERAKLTCSPDYAYGQQGHPGVIPPNSTLIFDVELL 367
G + +VGE++KLT S D YG +G P IP N+TL+F+VELL
Sbjct: 63 GVAQMSVGEKSKLTISADLGYGPRGVPPQIPANATLVFEVELL 105
>AL034393-20|CAA22330.1| 108|Caenorhabditis elegans Hypothetical
protein Y18D10A.19 protein.
Length = 108
Score = 97.9 bits (233), Expect = 6e-21
Identities = 44/67 (65%), Positives = 51/67 (76%)
Frame = +3
Query: 54 MGVTVETISPGDESTYPKSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRIGKSEVIRGW 233
MGV + + GD T PK+GQTV HY TL NGKK DSSRDRG PFKF+IGK EVI+GW
Sbjct: 1 MGVDRQILVEGDNVTKPKNGQTVTCHYVLTLENGKKIDSSRDRGTPFKFKIGKGEVIKGW 60
Query: 234 DEGVAKM 254
D+GVA+M
Sbjct: 61 DQGVAQM 67
Score = 50.8 bits (116), Expect = 9e-07
Identities = 23/43 (53%), Positives = 31/43 (72%)
Frame = +2
Query: 239 GCGKDAVGERAKLTCSPDYAYGQQGHPGVIPPNSTLIFDVELL 367
G + +VGE++KLT S D YG +G P IP N+TL+F+VELL
Sbjct: 63 GVAQMSVGEKSKLTISADLGYGPRGVPPQIPANATLVFEVELL 105
>AL034393-19|CAA22328.1| 290|Caenorhabditis elegans Hypothetical
protein Y18D10A.25 protein.
Length = 290
Score = 83.4 bits (197), Expect = 1e-16
Identities = 38/67 (56%), Positives = 47/67 (70%)
Frame = +3
Query: 54 MGVTVETISPGDESTYPKSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRIGKSEVIRGW 233
+GV + + GD T K+GQTV HY L +G K DSSRDR PFKF+IGK EVI+GW
Sbjct: 197 IGVDRQILVQGDNVTKSKNGQTVTCHYVLILVDGTKIDSSRDRETPFKFKIGKGEVIKGW 256
Query: 234 DEGVAKM 254
D+GVA+M
Sbjct: 257 DQGVAQM 263
Score = 34.7 bits (76), Expect = 0.065
Identities = 20/47 (42%), Positives = 24/47 (51%)
Frame = +2
Query: 224 PWLG*GCGKDAVGERAKLTCSPDYAYGQQGHPGVIPPNSTLIFDVEL 364
P L G K VGE A S Y YG+ G G+IP N++L V L
Sbjct: 140 PGLDIGIPKMKVGEIATFHVSGKYGYGRAGFRGLIPRNASLTCKVRL 186
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = +3
Query: 102 PKSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRIGKSEVIRGWDEGVAKM 254
P++GQ V + L + S+ + P F+IG EVI G D G+ KM
Sbjct: 99 PENGQLVQCYIEIKLADCYTSWSNYESQNPIIFKIGFGEVIPGLDIGIPKM 149
>Z92832-2|CAB07371.1| 431|Caenorhabditis elegans Hypothetical
protein F31D4.3 protein.
Length = 431
Score = 75.8 bits (178), Expect = 3e-14
Identities = 33/51 (64%), Positives = 37/51 (72%)
Frame = +3
Query: 102 PKSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRIGKSEVIRGWDEGVAKM 254
P +G TV VHY GTL NG KFDSSRDRG F F +G+ VI+GWD GVA M
Sbjct: 30 PTTGTTVKVHYVGTLENGTKFDSSRDRGDQFSFNLGRGNVIKGWDLGVATM 80
Score = 41.1 bits (92), Expect = 7e-04
Identities = 19/35 (54%), Positives = 22/35 (62%)
Frame = +2
Query: 260 GERAKLTCSPDYAYGQQGHPGVIPPNSTLIFDVEL 364
GE A+ T DY YG G P IP +TLIF+VEL
Sbjct: 83 GEVAEFTIRSDYGYGDAGSPPKIPGGATLIFEVEL 117
>Z68760-1|CAA92994.1| 139|Caenorhabditis elegans Hypothetical
protein F36H1.1 protein.
Length = 139
Score = 60.9 bits (141), Expect = 9e-10
Identities = 24/50 (48%), Positives = 35/50 (70%)
Frame = +3
Query: 105 KSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRIGKSEVIRGWDEGVAKM 254
+ G + +HYTGTL +G +FDSSR R + F F +G+ VI+GWD+G+ M
Sbjct: 43 RKGDQLHMHYTGTLLDGTEFDSSRTRNEEFTFTLGQGNVIKGWDQGLLNM 92
Score = 46.0 bits (104), Expect = 3e-05
Identities = 21/40 (52%), Positives = 27/40 (67%)
Frame = +2
Query: 257 VGERAKLTCSPDYAYGQQGHPGVIPPNSTLIFDVELLRLE 376
VGER LT P YG++G P IP NS L FDVEL++++
Sbjct: 94 VGERRILTIPPHLGYGERGAPPKIPGNSVLKFDVELMKID 133
>AF016430-1|AAB65370.1| 261|Caenorhabditis elegans Fk506-binding
protein family protein3 protein.
Length = 261
Score = 41.1 bits (92), Expect = 7e-04
Identities = 18/38 (47%), Positives = 24/38 (63%)
Frame = +2
Query: 260 GERAKLTCSPDYAYGQQGHPGVIPPNSTLIFDVELLRL 373
GE+ K+ P+ AYG+ G P IP NS L FD+ L +L
Sbjct: 216 GEKRKVVIPPELAYGENGRPPAIPGNSYLHFDLSLEKL 253
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/44 (40%), Positives = 27/44 (61%)
Frame = +3
Query: 105 KSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRIGKSEVIRGWD 236
++G T+ YT L +G DSS R +PF F++G +VI+G D
Sbjct: 164 QAGDTLHQQYTLNLEDGSFIDSSWSRNRPFIFKMGSGQVIKGMD 207
Score = 28.3 bits (60), Expect = 5.6
Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 3/63 (4%)
Frame = +3
Query: 57 GVTVETISP-GDESTYPKS--GQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRIGKSEVIR 227
GV +E I GD KS G + Y + GK S+ + KP+ F +GK EVI
Sbjct: 27 GVKIEIIKKIGDSKCKIKSESGDQLEQFYKLSDKEGKVIGSNFGQ-KPYTFTLGKGEVIH 85
Query: 228 GWD 236
G +
Sbjct: 86 GME 88
>U80445-9|AAB37799.1| 264|Caenorhabditis elegans Fk506-binding
protein family protein5, isoform a protein.
Length = 264
Score = 40.3 bits (90), Expect = 0.001
Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = +3
Query: 57 GVTVETISPGDESTYPKS--GQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRIGKSEVIRG 230
G+ +E DE KS G T+ Y L +G DSS R PF F++ +EVI+G
Sbjct: 151 GIVIEQTHKIDEDKCKKSKSGDTIHQQYVLHLEDGTFVDSSFSRNAPFIFKLNNNEVIKG 210
Query: 231 WDEGVAKM 254
D + M
Sbjct: 211 MDIAMTGM 218
Score = 33.1 bits (72), Expect = 0.20
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +2
Query: 260 GERAKLTCSPDYAYGQQGHPGVIPPNSTLIFDVELLRL 373
GER ++ D+ YG G IP + L FD+ L +L
Sbjct: 221 GERRQVVIPSDFGYGDDGRAPAIPGKARLYFDITLEKL 258
Score = 27.5 bits (58), Expect = 9.8
Identities = 18/69 (26%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Frame = +3
Query: 57 GVTVETISPGDESTYP---KSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRIGKSEVIR 227
G+ ++ I P P + G + Y + +GK+ S+ ++ KP+ F +GK +VI
Sbjct: 29 GLEIKIIRPIKAEKCPIKSQDGDVLDQWYKLSDKDGKEIGSNFNK-KPYTFTLGKGQVIP 87
Query: 228 GWDEGVAKM 254
G + + M
Sbjct: 88 GMERAMTGM 96
>U80445-8|AAK68259.1| 300|Caenorhabditis elegans Fk506-binding
protein family protein5, isoform b protein.
Length = 300
Score = 40.3 bits (90), Expect = 0.001
Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = +3
Query: 57 GVTVETISPGDESTYPKS--GQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRIGKSEVIRG 230
G+ +E DE KS G T+ Y L +G DSS R PF F++ +EVI+G
Sbjct: 187 GIVIEQTHKIDEDKCKKSKSGDTIHQQYVLHLEDGTFVDSSFSRNAPFIFKLNNNEVIKG 246
Query: 231 WDEGVAKM 254
D + M
Sbjct: 247 MDIAMTGM 254
Score = 33.1 bits (72), Expect = 0.20
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +2
Query: 260 GERAKLTCSPDYAYGQQGHPGVIPPNSTLIFDVELLRL 373
GER ++ D+ YG G IP + L FD+ L +L
Sbjct: 257 GERRQVVIPSDFGYGDDGRAPAIPGKARLYFDITLEKL 294
Score = 27.5 bits (58), Expect = 9.8
Identities = 18/69 (26%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Frame = +3
Query: 57 GVTVETISPGDESTYP---KSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRIGKSEVIR 227
G+ ++ I P P + G + Y + +GK+ S+ ++ KP+ F +GK +VI
Sbjct: 65 GLEIKIIRPIKAEKCPIKSQDGDVLDQWYKLSDKDGKEIGSNFNK-KPYTFTLGKGQVIP 123
Query: 228 GWDEGVAKM 254
G + + M
Sbjct: 124 GMERAMTGM 132
>Z75554-8|CAA99959.2| 259|Caenorhabditis elegans Hypothetical
protein ZC455.10 protein.
Length = 259
Score = 35.9 bits (79), Expect = 0.028
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +2
Query: 260 GERAKLTCSPDYAYGQQGHPGVIPPNSTLIFDVELLRL 373
GER ++ +Y YG QG P IP + L F++ L +L
Sbjct: 216 GERRRVVIPSEYGYGSQGSPPEIPGGARLFFEIVLEKL 253
Score = 32.7 bits (71), Expect = 0.26
Identities = 19/62 (30%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Frame = +3
Query: 57 GVTVETISP--GDESTYPKSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRIGKSEVIRG 230
G+ ++ I D+ ++G + Y L + DSS R PF FR+ EVI G
Sbjct: 146 GIQIDQIHKIEADKCKKAEAGDKIYQQYVLRLEDNTLVDSSYSRNAPFVFRLRNREVIDG 205
Query: 231 WD 236
D
Sbjct: 206 MD 207
>Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +3
Query: 90 ESTYPKSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRI 206
EST + VHY T+G K D S G+P KFR+
Sbjct: 190 ESTTEPGWKKARVHYYRLDTDGLKADKSLILGRPPKFRV 228
>Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +3
Query: 90 ESTYPKSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRI 206
EST + VHY T+G K D S G+P KFR+
Sbjct: 205 ESTTEPGWKKARVHYYRLDTDGLKADKSLILGRPPKFRV 243
>Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical
protein F07A11.6a protein.
Length = 2211
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +3
Query: 90 ESTYPKSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRI 206
EST + VHY T+G K D S G+P KFR+
Sbjct: 205 ESTTEPGWKKARVHYYRLDTDGLKADKSLILGRPPKFRV 243
>Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +3
Query: 90 ESTYPKSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRI 206
EST + VHY T+G K D S G+P KFR+
Sbjct: 190 ESTTEPGWKKARVHYYRLDTDGLKADKSLILGRPPKFRV 228
>Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +3
Query: 90 ESTYPKSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRI 206
EST + VHY T+G K D S G+P KFR+
Sbjct: 205 ESTTEPGWKKARVHYYRLDTDGLKADKSLILGRPPKFRV 243
>Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical
protein F07A11.6a protein.
Length = 2211
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +3
Query: 90 ESTYPKSGQTVVVHYTGTLTNGKKFDSSRDRGKPFKFRI 206
EST + VHY T+G K D S G+P KFR+
Sbjct: 205 ESTTEPGWKKARVHYYRLDTDGLKADKSLILGRPPKFRV 243
>Z81553-1|CAB04490.2| 327|Caenorhabditis elegans Hypothetical
protein F56H6.1 protein.
Length = 327
Score = 27.5 bits (58), Expect = 9.8
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -1
Query: 614 SMIFRISFISLTINLFTYNMKFLRIA*IYIYF 519
+++ ++ +L +FTY KFL A +Y YF
Sbjct: 12 ALLALVTVAALNYQIFTYQRKFLMPAELYTYF 43
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,931,669
Number of Sequences: 27780
Number of extensions: 339609
Number of successful extensions: 809
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 771
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 809
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1624019012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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